RNA–Protein interactions for RNA: ENST00000382045.3

LINC00487-201, long intergenic non-protein coding RNA 487, humanhuman

TSL 2 BASIC

Gene LINC00487, Length 2,131 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00487-201ENST00000382045 DIP2BQ9P265 1576 aa21.73■■□□□ 1.07
LINC00487-201ENST00000382045 NKTRP30414 1462 aaKnown RBP21.72■■□□□ 1.07
LINC00487-201ENST00000382045 TCERG1O14776 1098 aaKnown RBP21.72■■□□□ 1.07
LINC00487-201ENST00000382045 SPINK5Q9NQ38 1064 aaPredicted RBP21.71■■□□□ 1.07
LINC00487-201ENST00000382045 CYB5RLQ6IPT4 315 aa21.71■■□□□ 1.07
LINC00487-201ENST00000382045 ANKRD36BQ8N2N9 1353 aa21.7■■□□□ 1.06
LINC00487-201ENST00000382045 ERICH6Q7L0X2 663 aa21.7■■□□□ 1.06
LINC00487-201ENST00000382045 CGNL1Q0VF96 1302 aa21.69■■□□□ 1.06
LINC00487-201ENST00000382045 RIMBP3CA6NJZ7 1639 aa21.69■■□□□ 1.06
LINC00487-201ENST00000382045 RIMBP3BA6NNM3 1639 aa21.69■■□□□ 1.06
LINC00487-201ENST00000382045 RIMBP3Q9UFD9 1639 aa21.69■■□□□ 1.06
LINC00487-201ENST00000382045 E9PSI1 815 aa21.68■■□□□ 1.06
LINC00487-201ENST00000382045 PTPRMP28827 1452 aa21.67■■□□□ 1.06
LINC00487-201ENST00000382045 REREQ9P2R6 1566 aa21.67■■□□□ 1.06
LINC00487-201ENST00000382045 NSD2O96028 1365 aa21.66■■□□□ 1.06
LINC00487-201ENST00000382045 TSPOAP1O95153 1857 aa21.66■■□□□ 1.06
LINC00487-201ENST00000382045 TNNT2P45379 298 aaPredicted RBP21.66■■□□□ 1.06
LINC00487-201ENST00000382045 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.66■■□□□ 1.06
LINC00487-201ENST00000382045 IQSEC2Q5JU85 1478 aa21.66■■□□□ 1.06
LINC00487-201ENST00000382045 DMRT2Q9Y5R5 561 aa21.65■■□□□ 1.06
LINC00487-201ENST00000382045 CLTCQ00610 1675 aaKnown RBP21.65■■□□□ 1.06
LINC00487-201ENST00000382045 MS4A1P11836 297 aa21.65■■□□□ 1.06
LINC00487-201ENST00000382045 ANP32AP39687 249 aaKnown RBP21.64■■□□□ 1.05
LINC00487-201ENST00000382045 CABP2Q9NPB3 220 aa21.64■■□□□ 1.05
LINC00487-201ENST00000382045 KDM2BQ8NHM5 1336 aa21.63■■□□□ 1.05
LINC00487-201ENST00000382045 FAM69CQ0P6D2 419 aa21.63■■□□□ 1.05
LINC00487-201ENST00000382045 NINLQ9Y2I6 1382 aa21.63■■□□□ 1.05
LINC00487-201ENST00000382045 WWC1Q8IX03 1113 aa21.62■■□□□ 1.05
LINC00487-201ENST00000382045 AGLP35573 1532 aa21.62■■□□□ 1.05
LINC00487-201ENST00000382045 MTHFSP49914 203 aa21.61■■□□□ 1.05
LINC00487-201ENST00000382045 SAFB2Q14151 953 aaKnown RBP eCLIP21.61■■□□□ 1.05
LINC00487-201ENST00000382045 FBXO31Q5XUX0 539 aaPredicted RBP21.61■■□□□ 1.05
LINC00487-201ENST00000382045 NOP58Q9Y2X3 529 aaKnown RBP21.61■■□□□ 1.05
LINC00487-201ENST00000382045 YTHDC2Q9H6S0 1430 aaKnown RBP21.61■■□□□ 1.05
LINC00487-201ENST00000382045 RUNDC1Q96C34 613 aa21.61■■□□□ 1.05
LINC00487-201ENST00000382045 STK26Q9P289 416 aa21.61■■□□□ 1.05
LINC00487-201ENST00000382045 A0A1W2PP64 1363 aa21.6■■□□□ 1.05
LINC00487-201ENST00000382045 ALKQ9UM73 1620 aa21.6■■□□□ 1.05
LINC00487-201ENST00000382045 PDE4AP27815 886 aa21.6■■□□□ 1.05
LINC00487-201ENST00000382045 ABCC11Q96J66 1382 aa21.6■■□□□ 1.05
LINC00487-201ENST00000382045 ANKRD26Q9UPS8 1709 aa21.59■■□□□ 1.05
LINC00487-201ENST00000382045 IPO9Q96P70 1041 aaKnown RBP21.59■■□□□ 1.05
LINC00487-201ENST00000382045 BACH2Q9BYV9 841 aa21.59■■□□□ 1.05
LINC00487-201ENST00000382045 CFAP53Q96M91 514 aa21.58■■□□□ 1.05
LINC00487-201ENST00000382045 SENP3Q9H4L4 574 aaPredicted RBP21.58■■□□□ 1.04
LINC00487-201ENST00000382045 BCAR3O75815 825 aa21.57■■□□□ 1.04
LINC00487-201ENST00000382045 PHF23Q9BUL5 403 aaPredicted RBP21.57■■□□□ 1.04
LINC00487-201ENST00000382045 CENPQQ7L2Z9 268 aaPredicted RBP21.56■■□□□ 1.04
LINC00487-201ENST00000382045 ATAD2Q6PL18 1390 aa21.56■■□□□ 1.04
LINC00487-201ENST00000382045 SRPK2P78362 688 aaKnown RBP21.56■■□□□ 1.04
LINC00487-201ENST00000382045 TCP11L2Q8N4U5 519 aa21.56■■□□□ 1.04
LINC00487-201ENST00000382045 CD163L1Q9NR16 1453 aa21.55■■□□□ 1.04
LINC00487-201ENST00000382045 PAK3O75914 559 aaPredicted RBP21.55■■□□□ 1.04
LINC00487-201ENST00000382045 PRAM1Q96QH2 718 aa21.55■■□□□ 1.04
LINC00487-201ENST00000382045 SPATA31D1Q6ZQQ2 1576 aa21.55■■□□□ 1.04
LINC00487-201ENST00000382045 ADGRB2O60241 1585 aa21.55■■□□□ 1.04
LINC00487-201ENST00000382045 SKAP1Q86WV1 359 aa21.55■■□□□ 1.04
LINC00487-201ENST00000382045 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
LINC00487-201ENST00000382045 RRP7AQ9Y3A4 280 aaKnown RBP21.53■■□□□ 1.04
LINC00487-201ENST00000382045 SETD1AO15047 1707 aaKnown RBP21.53■■□□□ 1.04
LINC00487-201ENST00000382045 MINK1Q8N4C8 1332 aaPredicted RBP21.53■■□□□ 1.04
LINC00487-201ENST00000382045 A2ML1A8K2U0 1454 aa21.52■■□□□ 1.04
LINC00487-201ENST00000382045 MED14O60244 1454 aa21.52■■□□□ 1.04
LINC00487-201ENST00000382045 NLRP1Q9C000 1473 aa21.52■■□□□ 1.04
LINC00487-201ENST00000382045 NEUROD2Q15784 382 aa21.52■■□□□ 1.03
LINC00487-201ENST00000382045 CCDC27Q2M243 656 aa21.52■■□□□ 1.03
LINC00487-201ENST00000382045 ARHGEF40Q8TER5 1519 aa21.52■■□□□ 1.03
LINC00487-201ENST00000382045 POGKQ9P215 609 aa21.51■■□□□ 1.03
LINC00487-201ENST00000382045 WDR63Q8IWG1 891 aa21.5■■□□□ 1.03
LINC00487-201ENST00000382045 NCBP3Q53F19 620 aaKnown RBP21.5■■□□□ 1.03
LINC00487-201ENST00000382045 COL3A1P02461 1466 aaPredicted RBP21.5■■□□□ 1.03
LINC00487-201ENST00000382045 STAG3Q9UJ98 1225 aa21.49■■□□□ 1.03
LINC00487-201ENST00000382045 KIF20BQ96Q89 1820 aa21.49■■□□□ 1.03
LINC00487-201ENST00000382045 DLC1Q96QB1 1528 aa21.49■■□□□ 1.03
LINC00487-201ENST00000382045 TERF2IPQ9NYB0 399 aa21.49■■□□□ 1.03
LINC00487-201ENST00000382045 PDE3AQ14432 1141 aa21.48■■□□□ 1.03
LINC00487-201ENST00000382045 GGNBP2Q9H3C7 697 aa21.47■■□□□ 1.03
LINC00487-201ENST00000382045 U2AF1L5P0DN76 240 aaPredicted RBP21.47■■□□□ 1.03
LINC00487-201ENST00000382045 U2AF1Q01081 240 aaKnown RBP eCLIP21.47■■□□□ 1.03
LINC00487-201ENST00000382045 ZBTB47Q9UFB7 747 aaPredicted RBP21.46■■□□□ 1.03
LINC00487-201ENST00000382045 FYB1O15117 783 aa21.46■■□□□ 1.03
LINC00487-201ENST00000382045 NPM2Q86SE8 214 aaKnown RBP21.46■■□□□ 1.03
LINC00487-201ENST00000382045 RIMS2Q9UQ26 1411 aa21.45■■□□□ 1.02
LINC00487-201ENST00000382045 CDK19Q9BWU1 502 aa21.44■■□□□ 1.02
LINC00487-201ENST00000382045 KIF13AQ9H1H9 1805 aa21.44■■□□□ 1.02
LINC00487-201ENST00000382045 NRXN3Q9Y4C0 1643 aa21.43■■□□□ 1.02
LINC00487-201ENST00000382045 RARSP54136 660 aaKnown RBP21.43■■□□□ 1.02
LINC00487-201ENST00000382045 CANXP27824 592 aaKnown RBP21.41■■□□□ 1.02
LINC00487-201ENST00000382045 HDGFL2Q7Z4V5 671 aaPredicted RBP21.41■■□□□ 1.02
LINC00487-201ENST00000382045 PLEKHF1Q96S99 279 aa21.4■■□□□ 1.02
LINC00487-201ENST00000382045 PANK1Q8TE04 598 aa21.4■■□□□ 1.02
LINC00487-201ENST00000382045 CABP1Q9NZU7 370 aa21.4■■□□□ 1.02
LINC00487-201ENST00000382045 ATP7BP35670 1465 aa21.39■■□□□ 1.02
LINC00487-201ENST00000382045 MYH16Q9H6N6 1097 aa21.39■■□□□ 1.01
LINC00487-201ENST00000382045 MLECQ14165 292 aa21.38■■□□□ 1.01
LINC00487-201ENST00000382045 COG6Q9Y2V7 657 aa21.38■■□□□ 1.01
LINC00487-201ENST00000382045 PNPLA6Q8IY17 1366 aa21.38■■□□□ 1.01
LINC00487-201ENST00000382045 CLUAP1Q96AJ1 413 aa21.38■■□□□ 1.01
LINC00487-201ENST00000382045 U2SURPO15042 1029 aaKnown RBP21.37■■□□□ 1.01
LINC00487-201ENST00000382045 FRAT1Q92837 279 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms