RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 NCOA3Q9Y6Q9 1424 aa23.52■■□□□ 1.36
SMARCD1-201ENST00000381513 PDLIM2Q96JY6 352 aa23.52■■□□□ 1.35
SMARCD1-201ENST00000381513 COL17A1Q9UMD9 1497 aaPredicted RBP23.52■■□□□ 1.35
SMARCD1-201ENST00000381513 MCM5P33992 734 aa23.51■■□□□ 1.35
SMARCD1-201ENST00000381513 GAS2L2Q8NHY3 880 aa23.51■■□□□ 1.35
SMARCD1-201ENST00000381513 RBM25P49756 843 aaKnown RBP23.51■■□□□ 1.35
SMARCD1-201ENST00000381513 KIAA2012Q0VF49 1180 aa23.51■■□□□ 1.35
SMARCD1-201ENST00000381513 CGNQ9P2M7 1197 aaKnown RBP23.5■■□□□ 1.35
SMARCD1-201ENST00000381513 ARHGEF12Q9NZN5 1544 aa23.5■■□□□ 1.35
SMARCD1-201ENST00000381513 PLCD3Q8N3E9 789 aa23.5■■□□□ 1.35
SMARCD1-201ENST00000381513 TDRD9Q8NDG6 1382 aaKnown RBP23.5■■□□□ 1.35
SMARCD1-201ENST00000381513 SAMD9Q5K651 1589 aa23.5■■□□□ 1.35
SMARCD1-201ENST00000381513 DNMT1P26358 1616 aaKnown RBP23.49■■□□□ 1.35
SMARCD1-201ENST00000381513 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
SMARCD1-201ENST00000381513 MYRIPQ8NFW9 859 aa23.49■■□□□ 1.35
SMARCD1-201ENST00000381513 PRPF40AO75400 957 aaKnown RBP23.48■■□□□ 1.35
SMARCD1-201ENST00000381513 ATP2B3Q16720 1220 aa23.48■■□□□ 1.35
SMARCD1-201ENST00000381513 IBTKQ9P2D0 1353 aaPredicted RBP23.48■■□□□ 1.35
SMARCD1-201ENST00000381513 LNPKQ9C0E8 428 aa23.48■■□□□ 1.35
SMARCD1-201ENST00000381513 MVPQ14764 893 aaKnown RBP23.48■■□□□ 1.35
SMARCD1-201ENST00000381513 MAPK8IP2Q13387 824 aaPredicted RBP23.47■■□□□ 1.35
SMARCD1-201ENST00000381513 HMGXB3Q12766 1538 aa23.47■■□□□ 1.35
SMARCD1-201ENST00000381513 SYCE3A1L190 88 aa23.46■■□□□ 1.35
SMARCD1-201ENST00000381513 ZNF771Q7L3S4 317 aaPredicted RBP23.46■■□□□ 1.35
SMARCD1-201ENST00000381513 ITPRIPQ8IWB1 547 aa23.46■■□□□ 1.35
SMARCD1-201ENST00000381513 TMEM51Q9NW97 253 aa23.45■■□□□ 1.34
SMARCD1-201ENST00000381513 NESP48681 1621 aa23.45■■□□□ 1.34
SMARCD1-201ENST00000381513 ABCA10Q8WWZ4 1543 aa23.45■■□□□ 1.34
SMARCD1-201ENST00000381513 ZNF710Q8N1W2 664 aa23.44■■□□□ 1.34
SMARCD1-201ENST00000381513 DZIP1LQ8IYY4 767 aaKnown RBP23.44■■□□□ 1.34
SMARCD1-201ENST00000381513 ZBTB22O15209 634 aa23.43■■□□□ 1.34
SMARCD1-201ENST00000381513 PRAG1Q86YV5 1406 aa23.43■■□□□ 1.34
SMARCD1-201ENST00000381513 CUL7Q14999 1698 aa23.42■■□□□ 1.34
SMARCD1-201ENST00000381513 ZKSCAN2Q63HK3 967 aa23.42■■□□□ 1.34
SMARCD1-201ENST00000381513 KIF3AQ9Y496 699 aa23.42■■□□□ 1.34
SMARCD1-201ENST00000381513 HMGN5P82970 282 aaKnown RBP23.42■■□□□ 1.34
SMARCD1-201ENST00000381513 ZNF830Q96NB3 372 aaPredicted RBP23.41■■□□□ 1.34
SMARCD1-201ENST00000381513 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.41■■□□□ 1.342e-6■□□□□ 9
SMARCD1-201ENST00000381513 LMBRD1Q9NUN5 540 aa23.41■■□□□ 1.34
SMARCD1-201ENST00000381513 FOXD4L5Q5VV16 416 aaPredicted RBP23.4■■□□□ 1.34
SMARCD1-201ENST00000381513 FOXD4L4Q8WXT5 416 aaPredicted RBP23.4■■□□□ 1.34
SMARCD1-201ENST00000381513 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
SMARCD1-201ENST00000381513 PDCL2Q8N4E4 241 aa23.4■■□□□ 1.34
SMARCD1-201ENST00000381513 POLA1P09884 1462 aaPredicted RBP23.4■■□□□ 1.34
SMARCD1-201ENST00000381513 MAGI2Q86UL8 1455 aa23.4■■□□□ 1.34
SMARCD1-201ENST00000381513 IPO4Q8TEX9 1081 aaKnown RBP23.39■■□□□ 1.34
SMARCD1-201ENST00000381513 NGEFQ8N5V2 710 aa23.38■■□□□ 1.33
SMARCD1-201ENST00000381513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.38■■□□□ 1.333e-7■■□□□ 13.3
SMARCD1-201ENST00000381513 NUCB2P80303 420 aa23.38■■□□□ 1.33
SMARCD1-201ENST00000381513 CCDC144AA2RUR9 1427 aa23.38■■□□□ 1.33
SMARCD1-201ENST00000381513 TSPY4P0CV99 314 aa23.38■■□□□ 1.33
SMARCD1-201ENST00000381513 TSPY10P0CW01 314 aa23.38■■□□□ 1.33
SMARCD1-201ENST00000381513 PRIMPOLQ96LW4 560 aa23.38■■□□□ 1.33
SMARCD1-201ENST00000381513 KIF2CQ99661 725 aa23.38■■□□□ 1.33
SMARCD1-201ENST00000381513 C17orf53Q8N3J3 647 aaPredicted RBP23.37■■□□□ 1.33
SMARCD1-201ENST00000381513 KIF16BQ96L93 1317 aa23.37■■□□□ 1.33
SMARCD1-201ENST00000381513 PKP1Q13835 747 aa23.37■■□□□ 1.33
SMARCD1-201ENST00000381513 LRSAM1Q6UWE0 723 aa23.37■■□□□ 1.33
SMARCD1-201ENST00000381513 SCAPERQ9BY12 1400 aa23.36■■□□□ 1.33
SMARCD1-201ENST00000381513 SMC4Q9NTJ3 1288 aa23.36■■□□□ 1.33
SMARCD1-201ENST00000381513 U2AF2P26368 475 aaKnown RBP eCLIP23.35■■□□□ 1.334e-7■■□□□ 13.2
SMARCD1-201ENST00000381513 CHAMP1Q96JM3 812 aa23.35■■□□□ 1.33
SMARCD1-201ENST00000381513 TCP11L2Q8N4U5 519 aa23.34■■□□□ 1.33
SMARCD1-201ENST00000381513 GPT2Q8TD30 523 aa23.34■■□□□ 1.33
SMARCD1-201ENST00000381513 CLASP1Q7Z460 1538 aa23.34■■□□□ 1.33
SMARCD1-201ENST00000381513 NOLC1Q14978 699 aaKnown RBP eCLIP23.34■■□□□ 1.33
SMARCD1-201ENST00000381513 BCL2L12Q9HB09 334 aa23.34■■□□□ 1.33
SMARCD1-201ENST00000381513 TMEM63CQ9P1W3 806 aa23.34■■□□□ 1.33
SMARCD1-201ENST00000381513 CDCA8Q53HL2 280 aa23.33■■□□□ 1.33
SMARCD1-201ENST00000381513 PIK3C2GO75747 1445 aa23.33■■□□□ 1.33
SMARCD1-201ENST00000381513 TAF3Q5VWG9 929 aa23.33■■□□□ 1.32
SMARCD1-201ENST00000381513 CLEC17AQ6ZS10 378 aa23.32■■□□□ 1.32
SMARCD1-201ENST00000381513 FANCD2Q9BXW9 1451 aa23.32■■□□□ 1.32
SMARCD1-201ENST00000381513 HDAC1Q13547 482 aaPredicted RBP23.32■■□□□ 1.32
SMARCD1-201ENST00000381513 TTC12Q9H892 705 aaPredicted RBP23.31■■□□□ 1.32
SMARCD1-201ENST00000381513 DDX19BQ9UMR2 479 aa23.31■■□□□ 1.32
SMARCD1-201ENST00000381513 PLCB2Q00722 1185 aa23.3■■□□□ 1.32
SMARCD1-201ENST00000381513 ANKRD45Q5TZF3 282 aa23.3■■□□□ 1.32
SMARCD1-201ENST00000381513 TPRNQ4KMQ1 711 aa23.3■■□□□ 1.32
SMARCD1-201ENST00000381513 GPRASP1Q5JY77 1395 aa23.29■■□□□ 1.32
SMARCD1-201ENST00000381513 TBC1D9Q6ZT07 1266 aa23.29■■□□□ 1.32
SMARCD1-201ENST00000381513 TAF7LQ5H9L4 462 aa23.28■■□□□ 1.32
SMARCD1-201ENST00000381513 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
SMARCD1-201ENST00000381513 CHAF1AQ13111 956 aaPredicted RBP23.28■■□□□ 1.32
SMARCD1-201ENST00000381513 CHD1LQ86WJ1 897 aa23.28■■□□□ 1.32
SMARCD1-201ENST00000381513 NSFL1CQ9UNZ2 370 aaKnown RBP23.28■■□□□ 1.32
SMARCD1-201ENST00000381513 KCNJ4P48050 445 aa23.27■■□□□ 1.32
SMARCD1-201ENST00000381513 FAM135AQ9P2D6 1515 aa23.27■■□□□ 1.32
SMARCD1-201ENST00000381513 TRIM27P14373 513 aa23.27■■□□□ 1.32
SMARCD1-201ENST00000381513 PIBF1Q8WXW3 757 aa23.27■■□□□ 1.32
SMARCD1-201ENST00000381513 WDR7Q9Y4E6 1490 aa23.26■■□□□ 1.31
SMARCD1-201ENST00000381513 PAXIP1Q6ZW49 1069 aaPredicted RBP23.26■■□□□ 1.31
SMARCD1-201ENST00000381513 RUNDC1Q96C34 613 aa23.26■■□□□ 1.31
SMARCD1-201ENST00000381513 TSPY26PQ9H489 355 aa23.26■■□□□ 1.31
SMARCD1-201ENST00000381513 TSR2Q969E8 191 aaKnown RBP23.25■■□□□ 1.31
SMARCD1-201ENST00000381513 ABCC2Q92887 1545 aa23.25■■□□□ 1.31
SMARCD1-201ENST00000381513 NUCB1Q02818 461 aa23.25■■□□□ 1.31
SMARCD1-201ENST00000381513 BMP2KLQ5H9B9 411 aa23.25■■□□□ 1.31
SMARCD1-201ENST00000381513 PRG4Q92954 1404 aaPredicted RBP23.24■■□□□ 1.31
SMARCD1-201ENST00000381513 FOXD4L6Q3SYB3 417 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms