RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 ZBED9Q6R2W3 1325 aa29.01■■■□□ 2.23
GMDS-202ENST00000380815 PLPPR3Q6T4P5 718 aa29.01■■■□□ 2.23
GMDS-202ENST00000380815 CABP2Q9NPB3 220 aa29.01■■■□□ 2.23
GMDS-202ENST00000380815 EID1Q9Y6B2 187 aa29.01■■■□□ 2.23
GMDS-202ENST00000380815 MINK1Q8N4C8 1332 aaPredicted RBP29■■■□□ 2.23
GMDS-202ENST00000380815 TECPR2O15040 1411 aa29■■■□□ 2.23
GMDS-202ENST00000380815 ADAMTS13Q76LX8 1427 aa29■■■□□ 2.23
GMDS-202ENST00000380815 TXNDC2Q86VQ3 553 aa29■■■□□ 2.23
GMDS-202ENST00000380815 THEMISQ8N1K5 641 aaPredicted RBP29■■■□□ 2.23
GMDS-202ENST00000380815 RIMS1Q86UR5 1692 aaKnown RBP29■■■□□ 2.23
GMDS-202ENST00000380815 SIRT1Q96EB6 747 aa28.99■■■□□ 2.23
GMDS-202ENST00000380815 ADAMTSL3P82987 1691 aa28.99■■■□□ 2.23
GMDS-202ENST00000380815 ATAD2Q6PL18 1390 aa28.99■■■□□ 2.23
GMDS-202ENST00000380815 BCANQ96GW7 911 aa28.98■■■□□ 2.23
GMDS-202ENST00000380815 KNDC1Q76NI1 1749 aa28.98■■■□□ 2.23
GMDS-202ENST00000380815 PPP2R1AP30153 589 aa28.97■■■□□ 2.23
GMDS-202ENST00000380815 SRPK2P78362 688 aaKnown RBP28.97■■■□□ 2.23
GMDS-202ENST00000380815 ANKRD36BQ8N2N9 1353 aa28.97■■■□□ 2.23
GMDS-202ENST00000380815 FAM135BQ49AJ0 1406 aa28.96■■■□□ 2.23
GMDS-202ENST00000380815 NSD3Q9BZ95 1437 aa28.96■■■□□ 2.23
GMDS-202ENST00000380815 USP32Q8NFA0 1604 aa28.95■■■□□ 2.22
GMDS-202ENST00000380815 MED14O60244 1454 aa28.94■■■□□ 2.22
GMDS-202ENST00000380815 WAPLQ7Z5K2 1190 aa28.94■■■□□ 2.22
GMDS-202ENST00000380815 PLEKHH1Q9ULM0 1364 aa28.93■■■□□ 2.22
GMDS-202ENST00000380815 CPS1P31327 1500 aa28.93■■■□□ 2.22
GMDS-202ENST00000380815 CDK19Q9BWU1 502 aa28.92■■■□□ 2.22
GMDS-202ENST00000380815 INSRP06213 1382 aa28.91■■■□□ 2.22
GMDS-202ENST00000380815 CEP170BQ9Y4F5 1589 aaPredicted RBP28.91■■■□□ 2.22
GMDS-202ENST00000380815 CGNL1Q0VF96 1302 aa28.88■■■□□ 2.21
GMDS-202ENST00000380815 TBX22Q9Y458 520 aa28.85■■■□□ 2.21
GMDS-202ENST00000380815 A0A1W2PP64 1363 aa28.85■■■□□ 2.21
GMDS-202ENST00000380815 NSD2O96028 1365 aa28.85■■■□□ 2.21
GMDS-202ENST00000380815 TERF2IPQ9NYB0 399 aa28.84■■■□□ 2.21
GMDS-202ENST00000380815 DIP2AQ14689 1571 aa28.84■■■□□ 2.21
GMDS-202ENST00000380815 ZNF142P52746 1687 aaPredicted RBP28.82■■■□□ 2.2
GMDS-202ENST00000380815 WASLO00401 505 aaPredicted RBP28.82■■■□□ 2.2
GMDS-202ENST00000380815 SLC26A8Q96RN1 970 aa28.82■■■□□ 2.2
GMDS-202ENST00000380815 CD163L1Q9NR16 1453 aa28.82■■■□□ 2.2
GMDS-202ENST00000380815 ROBO2Q9HCK4 1378 aa28.81■■■□□ 2.2
GMDS-202ENST00000380815 MORC1Q86VD1 984 aa28.8■■■□□ 2.2
GMDS-202ENST00000380815 SETD1BQ9UPS6 1966 aaKnown RBP28.79■■■□□ 2.2
GMDS-202ENST00000380815 BLMP54132 1417 aaPredicted RBP28.79■■■□□ 2.2
GMDS-202ENST00000380815 PTPRUQ92729 1446 aa28.78■■■□□ 2.2
GMDS-202ENST00000380815 HDGFL2Q7Z4V5 671 aaPredicted RBP28.77■■■□□ 2.2
GMDS-202ENST00000380815 CABP1Q9NZU7 370 aa28.77■■■□□ 2.2
GMDS-202ENST00000380815 ATP7BP35670 1465 aa28.76■■■□□ 2.19
GMDS-202ENST00000380815 ADGRB2O60241 1585 aa28.74■■■□□ 2.19
GMDS-202ENST00000380815 PTCH1Q13635 1447 aa28.73■■■□□ 2.19
GMDS-202ENST00000380815 WDR43Q15061 677 aaKnown RBP eCLIP28.73■■■□□ 2.19
GMDS-202ENST00000380815 POLR3AO14802 1390 aaPredicted RBP28.72■■■□□ 2.19
GMDS-202ENST00000380815 ADAMTS8Q9UP79 889 aa28.72■■■□□ 2.19
GMDS-202ENST00000380815 AMOTL2Q9Y2J4 779 aa28.72■■■□□ 2.19
GMDS-202ENST00000380815 PIK3R4Q99570 1358 aa28.71■■■□□ 2.19
GMDS-202ENST00000380815 ANKLE2Q86XL3 938 aa28.7■■■□□ 2.19
GMDS-202ENST00000380815 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.69■■■□□ 2.18
GMDS-202ENST00000380815 SMG6Q86US8 1419 aaKnown RBP28.69■■■□□ 2.18
GMDS-202ENST00000380815 NUDT16Q96DE0 195 aaKnown RBP28.69■■■□□ 2.18
GMDS-202ENST00000380815 PPIP5K1Q6PFW1 1433 aa28.68■■■□□ 2.18
GMDS-202ENST00000380815 CCDC61Q9Y6R9 512 aa28.67■■■□□ 2.18
GMDS-202ENST00000380815 CPSF1Q10570 1443 aaKnown RBP28.66■■■□□ 2.18
GMDS-202ENST00000380815 SUPT16HQ9Y5B9 1047 aaKnown RBP28.66■■■□□ 2.18
GMDS-202ENST00000380815 XRN1Q8IZH2 1706 aaKnown RBP28.66■■■□□ 2.18
GMDS-202ENST00000380815 FYB1O15117 783 aa28.65■■■□□ 2.18
GMDS-202ENST00000380815 TNNT2P45379 298 aaPredicted RBP28.65■■■□□ 2.18
GMDS-202ENST00000380815 ANKRD26Q9UPS8 1709 aa28.64■■■□□ 2.18
GMDS-202ENST00000380815 NEFLP07196 543 aa28.64■■■□□ 2.18
GMDS-202ENST00000380815 NUDCQ9Y266 331 aa28.62■■■□□ 2.17
GMDS-202ENST00000380815 CDC42BPGQ6DT37 1551 aa28.62■■■□□ 2.17
GMDS-202ENST00000380815 SENP3-EIF4A1A0A087X0R7 540 aa28.61■■■□□ 2.17
GMDS-202ENST00000380815 GGNBP2Q9H3C7 697 aa28.61■■■□□ 2.17
GMDS-202ENST00000380815 PDE3BQ13370 1112 aa28.6■■■□□ 2.17
GMDS-202ENST00000380815 PRR36Q9H6K5 1346 aa28.6■■■□□ 2.17
GMDS-202ENST00000380815 MTHFSP49914 203 aa28.6■■■□□ 2.17
GMDS-202ENST00000380815 EDC4Q6P2E9 1401 aaKnown RBP28.59■■■□□ 2.17
GMDS-202ENST00000380815 KIF20BQ96Q89 1820 aa28.59■■■□□ 2.17
GMDS-202ENST00000380815 FKBP8Q14318 412 aa28.58■■■□□ 2.17
GMDS-202ENST00000380815 CFAP53Q96M91 514 aa28.57■■■□□ 2.16
GMDS-202ENST00000380815 ZNF692Q9BU19 519 aaPredicted RBP28.56■■■□□ 2.16
GMDS-202ENST00000380815 NCKAP5LQ9HCH0 1330 aa28.55■■■□□ 2.16
GMDS-202ENST00000380815 TOPAZ1Q8N9V7 1692 aa28.55■■■□□ 2.16
GMDS-202ENST00000380815 KCNA6P17658 529 aa28.55■■■□□ 2.16
GMDS-202ENST00000380815 MON2Q7Z3U7 1717 aa28.54■■■□□ 2.16
GMDS-202ENST00000380815 SHPRHQ149N8 1683 aa28.54■■■□□ 2.16
GMDS-202ENST00000380815 AKAP12Q02952 1782 aa28.53■■■□□ 2.16
GMDS-202ENST00000380815 SALL2Q9Y467 1007 aaPredicted RBP28.53■■■□□ 2.16
GMDS-202ENST00000380815 PLEKHG3A1L390 1219 aa28.52■■■□□ 2.16
GMDS-202ENST00000380815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.52■■■□□ 2.166e-7■■□□□ 13.1
GMDS-202ENST00000380815 CHD2O14647 1828 aaKnown RBP28.52■■■□□ 2.16
GMDS-202ENST00000380815 ITSN1Q15811 1721 aa28.52■■■□□ 2.16
GMDS-202ENST00000380815 NPHP4O75161 1426 aaPredicted RBP28.51■■■□□ 2.15
GMDS-202ENST00000380815 NGEFQ8N5V2 710 aa28.47■■■□□ 2.15
GMDS-202ENST00000380815 CCDC146Q8IYE0 955 aa28.45■■■□□ 2.15
GMDS-202ENST00000380815 ACEP12821 1306 aa28.44■■■□□ 2.14
GMDS-202ENST00000380815 NKTRP30414 1462 aaKnown RBP28.44■■■□□ 2.14
GMDS-202ENST00000380815 ZNF521Q96K83 1311 aa28.44■■■□□ 2.14
GMDS-202ENST00000380815 ANKARQ7Z5J8 1434 aa28.43■■■□□ 2.14
GMDS-202ENST00000380815 NUTM2FA1L443 756 aa28.43■■■□□ 2.14
GMDS-202ENST00000380815 COL3A1P02461 1466 aaPredicted RBP28.43■■■□□ 2.14
GMDS-202ENST00000380815 NME9Q86XW9 330 aa28.42■■■□□ 2.14
GMDS-202ENST00000380815 PNPLA6Q8IY17 1366 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms