RNA–Protein interactions for RNA: ENST00000380171.7

ATRAID-201, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-201ENST00000380171 PRAM1Q96QH2 718 aa38.27■■■■□ 3.72
ATRAID-201ENST00000380171 SCAF1Q9H7N4 1312 aaKnown RBP38.27■■■■□ 3.72
ATRAID-201ENST00000380171 CDC42BPGQ6DT37 1551 aa38.27■■■■□ 3.72
ATRAID-201ENST00000380171 ATF3P18847 181 aa38.26■■■■□ 3.72
ATRAID-201ENST00000380171 POGKQ9P215 609 aa38.25■■■■□ 3.71
ATRAID-201ENST00000380171 PIP4K2BP78356 416 aa38.24■■■■□ 3.71
ATRAID-201ENST00000380171 CADPS2Q86UW7 1296 aa38.24■■■■□ 3.71
ATRAID-201ENST00000380171 SAFB2Q14151 953 aaKnown RBP eCLIP38.21■■■■□ 3.71
ATRAID-201ENST00000380171 GPRASP1Q5JY77 1395 aa38.2■■■■□ 3.71
ATRAID-201ENST00000380171 ADGRB2O60241 1585 aa38.18■■■■□ 3.7
ATRAID-201ENST00000380171 ROBO1Q9Y6N7 1651 aa38.17■■■■□ 3.7
ATRAID-201ENST00000380171 ILDR1Q86SU0 546 aaPredicted RBP38.16■■■■□ 3.7
ATRAID-201ENST00000380171 MST1RQ04912 1400 aa38.15■■■■□ 3.7
ATRAID-201ENST00000380171 FMN2Q9NZ56 1722 aa38.15■■■■□ 3.7
ATRAID-201ENST00000380171 QRICH2Q9H0J4 1663 aa38.14■■■■□ 3.7
ATRAID-201ENST00000380171 SLAIN2Q9P270 581 aa38.14■■■■□ 3.7
ATRAID-201ENST00000380171 CARD11Q9BXL7 1154 aa38.12■■■■□ 3.69
ATRAID-201ENST00000380171 EIF3AQ14152 1382 aaKnown RBP38.11■■■■□ 3.69
ATRAID-201ENST00000380171 MINK1Q8N4C8 1332 aaPredicted RBP38.09■■■■□ 3.69
ATRAID-201ENST00000380171 CENPJQ9HC77 1338 aaPredicted RBP38.07■■■■□ 3.68
ATRAID-201ENST00000380171 C1orf167Q5SNV9 1468 aa38.05■■■■□ 3.68
ATRAID-201ENST00000380171 HIRIP3Q9BW71 556 aaPredicted RBP38.04■■■■□ 3.68
ATRAID-201ENST00000380171 NUTM2FA1L443 756 aa37.97■■■■□ 3.67
ATRAID-201ENST00000380171 TULP4Q9NRJ4 1543 aa37.96■■■■□ 3.67
ATRAID-201ENST00000380171 RGPD8O14715 1765 aaPredicted RBP37.96■■■■□ 3.67
ATRAID-201ENST00000380171 USP32Q8NFA0 1604 aa37.95■■■■□ 3.67
ATRAID-201ENST00000380171 BRINP3Q76B58 766 aa37.95■■■■□ 3.67
ATRAID-201ENST00000380171 PHLPP1O60346 1717 aa37.94■■■■□ 3.66
ATRAID-201ENST00000380171 NHSL1Q5SYE7 1610 aa37.92■■■■□ 3.66
ATRAID-201ENST00000380171 AHDC1Q5TGY3 1603 aaPredicted RBP37.92■■■■□ 3.66
ATRAID-201ENST00000380171 WASLO00401 505 aaPredicted RBP37.92■■■■□ 3.66
ATRAID-201ENST00000380171 ANKARQ7Z5J8 1434 aa37.92■■■■□ 3.66
ATRAID-201ENST00000380171 HSPA1LP34931 641 aa37.91■■■■□ 3.66
ATRAID-201ENST00000380171 KIF1AQ12756 1690 aa37.91■■■■□ 3.66
ATRAID-201ENST00000380171 USP47Q96K76 1375 aa37.89■■■■□ 3.66
ATRAID-201ENST00000380171 ITSN1Q15811 1721 aa37.89■■■■□ 3.66
ATRAID-201ENST00000380171 ORAI2Q96SN7 254 aa37.88■■■■□ 3.65
ATRAID-201ENST00000380171 ESCO1Q5FWF5 840 aa37.86■■■■□ 3.65
ATRAID-201ENST00000380171 SBNO2Q9Y2G9 1366 aa37.85■■■■□ 3.65
ATRAID-201ENST00000380171 ATP7BP35670 1465 aa37.84■■■■□ 3.65
ATRAID-201ENST00000380171 COL16A1Q07092 1604 aaPredicted RBP37.83■■■■□ 3.65
ATRAID-201ENST00000380171 CDK19Q9BWU1 502 aa37.83■■■■□ 3.65
ATRAID-201ENST00000380171 TOPAZ1Q8N9V7 1692 aa37.82■■■■□ 3.65
ATRAID-201ENST00000380171 PRR36Q9H6K5 1346 aa37.81■■■■□ 3.64
ATRAID-201ENST00000380171 EVC2Q86UK5 1308 aa37.79■■■■□ 3.64
ATRAID-201ENST00000380171 SRPK2P78362 688 aaKnown RBP37.78■■■■□ 3.64
ATRAID-201ENST00000380171 ST20-MTHFSA0A0A6YYL1 179 aa37.76■■■■□ 3.64
ATRAID-201ENST00000380171 DDX17Q92841 729 aaKnown RBP37.75■■■■□ 3.63
ATRAID-201ENST00000380171 NUDT16Q96DE0 195 aaKnown RBP37.74■■■■□ 3.63
ATRAID-201ENST00000380171 PHF8Q9UPP1 1060 aa37.74■■■■□ 3.63
ATRAID-201ENST00000380171 CABP2Q9NPB3 220 aa37.72■■■■□ 3.63
ATRAID-201ENST00000380171 NPHP3Q7Z494 1330 aa37.71■■■■□ 3.63
ATRAID-201ENST00000380171 FOXO3O43524 673 aa37.68■■■■□ 3.62
ATRAID-201ENST00000380171 PXDNQ92626 1479 aa37.68■■■■□ 3.62
ATRAID-201ENST00000380171 PMFBP1Q8TBY8 1022 aa37.67■■■■□ 3.62
ATRAID-201ENST00000380171 TESK2Q96S53 571 aa37.67■■■■□ 3.62
ATRAID-201ENST00000380171 PPIP5K1Q6PFW1 1433 aa37.64■■■■□ 3.62
ATRAID-201ENST00000380171 CCDC61Q9Y6R9 512 aa37.64■■■■□ 3.62
ATRAID-201ENST00000380171 SOS2Q07890 1332 aaPredicted RBP37.63■■■■□ 3.62
ATRAID-201ENST00000380171 SHPRHQ149N8 1683 aa37.63■■■■□ 3.62
ATRAID-201ENST00000380171 EIF4G2P78344 907 aaKnown RBP eCLIP37.62■■■■□ 3.61
ATRAID-201ENST00000380171 XPCQ01831 940 aaPredicted RBP37.62■■■■□ 3.61
ATRAID-201ENST00000380171 ATAD2Q6PL18 1390 aa37.62■■■■□ 3.61
ATRAID-201ENST00000380171 SLC24A1O60721 1099 aa37.61■■■■□ 3.61
ATRAID-201ENST00000380171 JCADQ9P266 1359 aa37.6■■■■□ 3.61
ATRAID-201ENST00000380171 NGDNQ8NEJ9 315 aaKnown RBP37.58■■■■□ 3.61
ATRAID-201ENST00000380171 HSPA5P11021 654 aaKnown RBP37.57■■■■□ 3.6
ATRAID-201ENST00000380171 DISP3Q9P2K9 1392 aa37.56■■■■□ 3.6
ATRAID-201ENST00000380171 LRRC59Q96AG4 307 aaKnown RBP37.56■■■■□ 3.6
ATRAID-201ENST00000380171 TRPM3Q9HCF6 1732 aaPredicted RBP37.56■■■■□ 3.6
ATRAID-201ENST00000380171 TMF1P82094 1093 aa37.55■■■■□ 3.6
ATRAID-201ENST00000380171 KRT28Q7Z3Y7 464 aa37.55■■■■□ 3.6
ATRAID-201ENST00000380171 PSME1Q06323 249 aa37.54■■■■□ 3.6
ATRAID-201ENST00000380171 POLR3AO14802 1390 aaPredicted RBP37.54■■■■□ 3.6
ATRAID-201ENST00000380171 PLEKHG3A1L390 1219 aa37.53■■■■□ 3.6
ATRAID-201ENST00000380171 ACEP12821 1306 aa37.51■■■■□ 3.6
ATRAID-201ENST00000380171 CABP1Q9NZU7 370 aa37.5■■■■□ 3.59
ATRAID-201ENST00000380171 PNPLA6Q8IY17 1366 aa37.5■■■■□ 3.59
ATRAID-201ENST00000380171 TNS3Q68CZ2 1445 aa37.5■■■■□ 3.59
ATRAID-201ENST00000380171 AKAP12Q02952 1782 aa37.49■■■■□ 3.59
ATRAID-201ENST00000380171 PUS7Q96PZ0 661 aaKnown RBP37.48■■■■□ 3.59
ATRAID-201ENST00000380171 COL22A1Q8NFW1 1626 aaPredicted RBP37.47■■■■□ 3.59
ATRAID-201ENST00000380171 SBNO1A3KN83 1393 aa37.47■■■■□ 3.59
ATRAID-201ENST00000380171 MED1Q15648 1581 aaPredicted RBP37.45■■■■□ 3.59
ATRAID-201ENST00000380171 ALS2Q96Q42 1657 aa37.44■■■■□ 3.58
ATRAID-201ENST00000380171 SPATA31A3Q5VYP0 1347 aa37.44■■■■□ 3.58
ATRAID-201ENST00000380171 CDCA8Q53HL2 280 aa37.44■■■■□ 3.58
ATRAID-201ENST00000380171 SPATA31A6Q5VVP1 1343 aa37.42■■■■□ 3.58
ATRAID-201ENST00000380171 TMC1Q8TDI8 760 aa37.42■■■■□ 3.58
ATRAID-201ENST00000380171 MON2Q7Z3U7 1717 aa37.41■■■■□ 3.58
ATRAID-201ENST00000380171 NINLQ9Y2I6 1382 aa37.4■■■■□ 3.58
ATRAID-201ENST00000380171 USP6P35125 1406 aa37.39■■■■□ 3.58
ATRAID-201ENST00000380171 ARHGEF10O15013 1369 aa37.39■■■■□ 3.58
ATRAID-201ENST00000380171 MYOM1P52179 1685 aa37.38■■■■□ 3.57
ATRAID-201ENST00000380171 PAK3O75914 559 aaPredicted RBP37.38■■■■□ 3.57
ATRAID-201ENST00000380171 LMOD2Q6P5Q4 547 aa37.37■■■■□ 3.57
ATRAID-201ENST00000380171 NRKQ7Z2Y5 1582 aa37.37■■■■□ 3.57
ATRAID-201ENST00000380171 LRP6O75581 1613 aa37.36■■■■□ 3.57
ATRAID-201ENST00000380171 CD163L1Q9NR16 1453 aa37.35■■■■□ 3.57
ATRAID-201ENST00000380171 CPSF1Q10570 1443 aaKnown RBP37.35■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms