RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TOMM22Q9NS69 142 aa8.3□□□□□ -1.08
NEDD9-202ENST00000379446 PSDA5PKW4 1024 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-202ENST00000379446 ELL2O00472 640 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-202ENST00000379446 PLEKHH2Q8IVE3 1493 aa8.3□□□□□ -1.08
NEDD9-202ENST00000379446 RFC4P35249 363 aa8.3□□□□□ -1.08
NEDD9-202ENST00000379446 SLC4A3P48751 1232 aa8.3□□□□□ -1.08
NEDD9-202ENST00000379446 BTG4Q9NY30 223 aa8.3□□□□□ -1.08
NEDD9-202ENST00000379446 HSPA1LP34931 641 aa8.29□□□□□ -1.08
NEDD9-202ENST00000379446 TMOD3Q9NYL9 352 aa8.29□□□□□ -1.08
NEDD9-202ENST00000379446 CNTLNQ9NXG0 1405 aa8.29□□□□□ -1.08
NEDD9-202ENST00000379446 CDK13Q14004 1512 aaKnown RBP8.29□□□□□ -1.08
NEDD9-202ENST00000379446 PLIN1O60240 522 aa8.29□□□□□ -1.08
NEDD9-202ENST00000379446 AMER1Q5JTC6 1135 aaPredicted RBP8.29□□□□□ -1.08
NEDD9-202ENST00000379446 VPS53Q5VIR6 699 aa8.29□□□□□ -1.08
NEDD9-202ENST00000379446 CABP1Q9NZU7 370 aa8.28□□□□□ -1.08
NEDD9-202ENST00000379446 FANCIQ9NVI1 1328 aa8.28□□□□□ -1.08
NEDD9-202ENST00000379446 CALD1Q05682 793 aaKnown RBP8.28□□□□□ -1.08
NEDD9-202ENST00000379446 ZMYM3Q14202 1370 aa8.28□□□□□ -1.08
NEDD9-202ENST00000379446 ZNF530Q6P9A1 599 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-202ENST00000379446 KIF6Q6ZMV9 814 aa8.28□□□□□ -1.08
NEDD9-202ENST00000379446 KCNH5Q8NCM2 988 aa8.28□□□□□ -1.08
NEDD9-202ENST00000379446 PTPN23Q9H3S7 1636 aa8.28□□□□□ -1.08
NEDD9-202ENST00000379446 TROQ12816 1431 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-202ENST00000379446 ZNF408Q9H9D4 720 aa8.28□□□□□ -1.08
NEDD9-202ENST00000379446 KCNA6P17658 529 aa8.27□□□□□ -1.09
NEDD9-202ENST00000379446 SMG6Q86US8 1419 aaKnown RBP8.27□□□□□ -1.09
NEDD9-202ENST00000379446 ANKRD50Q9ULJ7 1429 aa8.27□□□□□ -1.09
NEDD9-202ENST00000379446 CGNL1Q0VF96 1302 aa8.27□□□□□ -1.09
NEDD9-202ENST00000379446 ECM2O94769 699 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-202ENST00000379446 CNKSR2Q8WXI2 1034 aa8.27□□□□□ -1.09
NEDD9-202ENST00000379446 BCL2L13Q9BXK5 485 aa8.27□□□□□ -1.09
NEDD9-202ENST00000379446 ZBED9Q6R2W3 1325 aa8.27□□□□□ -1.09
NEDD9-202ENST00000379446 ST20-MTHFSA0A0A6YYL1 179 aa8.26□□□□□ -1.09
NEDD9-202ENST00000379446 MTHFSP49914 203 aa8.26□□□□□ -1.09
NEDD9-202ENST00000379446 EPRSP07814 1512 aaKnown RBP8.26□□□□□ -1.09
NEDD9-202ENST00000379446 EHBP1L1Q8N3D4 1523 aa8.26□□□□□ -1.09
NEDD9-202ENST00000379446 RTEL1-TNFRSF6BF6WH68 1400 aa8.26□□□□□ -1.09
NEDD9-202ENST00000379446 HMOX1P09601 288 aa8.26□□□□□ -1.09
NEDD9-202ENST00000379446 NUDT16Q96DE0 195 aaKnown RBP8.26□□□□□ -1.09
NEDD9-202ENST00000379446 DDRGK1Q96HY6 314 aa8.26□□□□□ -1.09
NEDD9-202ENST00000379446 ATF5Q9Y2D1 282 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-202ENST00000379446 CAPN15O75808 1086 aa8.26□□□□□ -1.09
NEDD9-202ENST00000379446 CCDC61Q9Y6R9 512 aa8.26□□□□□ -1.09
NEDD9-202ENST00000379446 LMOD3Q0VAK6 560 aa8.26□□□□□ -1.09
NEDD9-202ENST00000379446 DDX17Q92841 729 aaKnown RBP8.26□□□□□ -1.09
NEDD9-202ENST00000379446 ZNF428Q96B54 188 aa8.26□□□□□ -1.09
NEDD9-202ENST00000379446 CFAP43Q8NDM7 1665 aa8.26□□□□□ -1.09
NEDD9-202ENST00000379446 USP47Q96K76 1375 aa8.25□□□□□ -1.09
NEDD9-202ENST00000379446 ZNF692Q9BU19 519 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-202ENST00000379446 BCS1LQ9Y276 419 aa8.25□□□□□ -1.09
NEDD9-202ENST00000379446 HDAC5Q9UQL6 1122 aa8.25□□□□□ -1.09
NEDD9-202ENST00000379446 SUPT6HQ7KZ85 1726 aaKnown RBP8.25□□□□□ -1.09
NEDD9-202ENST00000379446 BIN2Q9UBW5 565 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-202ENST00000379446 BRPF3Q9ULD4 1205 aa8.24□□□□□ -1.09
NEDD9-202ENST00000379446 UHRF1BP1LA0JNW5 1464 aa8.24□□□□□ -1.09
NEDD9-202ENST00000379446 WDR78Q5VTH9 848 aa8.24□□□□□ -1.09
NEDD9-202ENST00000379446 RIC3Q7Z5B4 369 aa8.24□□□□□ -1.09
NEDD9-202ENST00000379446 PARP3Q9Y6F1 533 aa8.24□□□□□ -1.09
NEDD9-202ENST00000379446 WDR7Q9Y4E6 1490 aa8.24□□□□□ -1.09
NEDD9-202ENST00000379446 HSP90B1P14625 803 aaKnown RBP8.24□□□□□ -1.09
NEDD9-202ENST00000379446 FAM182BQ5T319 152 aa8.24□□□□□ -1.09
NEDD9-202ENST00000379446 AMOTL1Q8IY63 956 aa8.24□□□□□ -1.09
NEDD9-202ENST00000379446 DDX58O95786 925 aaKnown RBP8.23□□□□□ -1.09
NEDD9-202ENST00000379446 HSP90AB1P08238 724 aaKnown RBP8.23□□□□□ -1.09
NEDD9-202ENST00000379446 ERICH6BQ5W0A0 696 aa8.23□□□□□ -1.09
NEDD9-202ENST00000379446 LMOD1P29536 600 aaPredicted RBP8.23□□□□□ -1.09
NEDD9-202ENST00000379446 C9orf78Q9NZ63 289 aaPredicted RBP8.23□□□□□ -1.09
NEDD9-202ENST00000379446 CUL7Q14999 1698 aa8.23□□□□□ -1.09
NEDD9-202ENST00000379446 TRIM37O94972 964 aa8.23□□□□□ -1.09
NEDD9-202ENST00000379446 GLIPR1L2Q4G1C9 344 aa8.23□□□□□ -1.09
NEDD9-202ENST00000379446 ARHGAP27Q6ZUM4 889 aa8.23□□□□□ -1.09
NEDD9-202ENST00000379446 JDP2Q8WYK2 163 aa8.23□□□□□ -1.09
NEDD9-202ENST00000379446 STARD3NLO95772 234 aa8.22□□□□□ -1.09
NEDD9-202ENST00000379446 MIA2Q96PC5 1412 aa8.22□□□□□ -1.09
NEDD9-202ENST00000379446 EAPPQ56P03 285 aaPredicted RBP8.22□□□□□ -1.09
NEDD9-202ENST00000379446 ZSCAN29Q8IWY8 852 aaPredicted RBP8.22□□□□□ -1.09
NEDD9-202ENST00000379446 DIAPH1O60610 1272 aaKnown RBP8.22□□□□□ -1.09
NEDD9-202ENST00000379446 RPGRQ92834 1020 aaKnown RBP8.22□□□□□ -1.09
NEDD9-202ENST00000379446 AIDAQ96BJ3 306 aa8.22□□□□□ -1.09
NEDD9-202ENST00000379446 KRT27Q7Z3Y8 459 aa8.22□□□□□ -1.09
NEDD9-202ENST00000379446 WDR62O43379 1518 aa8.21□□□□□ -1.09
NEDD9-202ENST00000379446 TMOD2Q9NZR1 351 aa8.21□□□□□ -1.09
NEDD9-202ENST00000379446 ZNF652Q9Y2D9 606 aa8.21□□□□□ -1.09
NEDD9-202ENST00000379446 VSIG10Q8N0Z9 540 aa8.21□□□□□ -1.1
NEDD9-202ENST00000379446 IPO9Q96P70 1041 aaKnown RBP8.21□□□□□ -1.1
NEDD9-202ENST00000379446 DAPK1P53355 1430 aa8.21□□□□□ -1.1
NEDD9-202ENST00000379446 C9orf84Q5VXU9 1444 aa8.21□□□□□ -1.1
NEDD9-202ENST00000379446 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
NEDD9-202ENST00000379446 DHX16O60231 1041 aaKnown RBP8.21□□□□□ -1.1
NEDD9-202ENST00000379446 TCEAL9Q9UHQ7 104 aa8.21□□□□□ -1.1
NEDD9-202ENST00000379446 IQGAP2Q13576 1575 aa8.21□□□□□ -1.1
NEDD9-202ENST00000379446 ANKRD30BQ9BXX2 1392 aa8.21□□□□□ -1.1
NEDD9-202ENST00000379446 RBM6P78332 1123 aaKnown RBP8.21□□□□□ -1.1
NEDD9-202ENST00000379446 USHBP1Q8N6Y0 703 aa8.21□□□□□ -1.1
NEDD9-202ENST00000379446 ORAI2Q96SN7 254 aa8.21□□□□□ -1.1
NEDD9-202ENST00000379446 GJA3Q9Y6H8 435 aa8.21□□□□□ -1.1
NEDD9-202ENST00000379446 AFF2P51816 1311 aa8.2□□□□□ -1.1
NEDD9-202ENST00000379446 IKQ13123 557 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-202ENST00000379446 CCDC27Q2M243 656 aa8.2□□□□□ -1.1
NEDD9-202ENST00000379446 MSL1Q68DK7 614 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms