RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 WAPLQ7Z5K2 1190 aa36.05■■■■□ 3.36
TNFRSF4-201ENST00000379236 LRRC59Q96AG4 307 aaKnown RBP36.04■■■■□ 3.36
TNFRSF4-201ENST00000379236 RGS17Q9UGC6 210 aaPredicted RBP36.04■■■■□ 3.36
TNFRSF4-201ENST00000379236 DDX17Q92841 729 aaKnown RBP36.02■■■■□ 3.36
TNFRSF4-201ENST00000379236 KDM2AQ9Y2K7 1162 aa36.02■■■■□ 3.36
TNFRSF4-201ENST00000379236 LRP6O75581 1613 aa36.01■■■■□ 3.36
TNFRSF4-201ENST00000379236 DCAF11Q8TEB1 546 aa36.01■■■■□ 3.36
TNFRSF4-201ENST00000379236 ORAI2Q96SN7 254 aa36■■■■□ 3.35
TNFRSF4-201ENST00000379236 PLEKHH1Q9ULM0 1364 aa35.98■■■■□ 3.35
TNFRSF4-201ENST00000379236 FMN2Q9NZ56 1722 aa35.97■■■■□ 3.35
TNFRSF4-201ENST00000379236 NUTM2BA6NNL0 878 aaPredicted RBP35.97■■■■□ 3.35
TNFRSF4-201ENST00000379236 NUTM2EB1AL46 878 aaPredicted RBP35.97■■■■□ 3.35
TNFRSF4-201ENST00000379236 NUTM2AQ8IVF1 878 aaPredicted RBP35.97■■■■□ 3.35
TNFRSF4-201ENST00000379236 ESCO1Q5FWF5 840 aa35.96■■■■□ 3.35
TNFRSF4-201ENST00000379236 SIRT1Q96EB6 747 aa35.94■■■■□ 3.34
TNFRSF4-201ENST00000379236 STAC3Q96MF2 364 aa35.94■■■■□ 3.34
TNFRSF4-201ENST00000379236 NUTM2FA1L443 756 aa35.92■■■■□ 3.34
TNFRSF4-201ENST00000379236 DLC1Q96QB1 1528 aa35.9■■■■□ 3.34
TNFRSF4-201ENST00000379236 POTEAQ6S8J7 498 aa35.9■■■■□ 3.34
TNFRSF4-201ENST00000379236 PNPLA6Q8IY17 1366 aa35.89■■■■□ 3.34
TNFRSF4-201ENST00000379236 POGKQ9P215 609 aa35.89■■■■□ 3.34
TNFRSF4-201ENST00000379236 PRAM1Q96QH2 718 aa35.88■■■■□ 3.33
TNFRSF4-201ENST00000379236 ADGRB1O14514 1584 aa35.88■■■■□ 3.33
TNFRSF4-201ENST00000379236 KIF1AQ12756 1690 aa35.88■■■■□ 3.33
TNFRSF4-201ENST00000379236 SOS2Q07890 1332 aaPredicted RBP35.87■■■■□ 3.33
TNFRSF4-201ENST00000379236 NPHP3Q7Z494 1330 aa35.87■■■■□ 3.33
TNFRSF4-201ENST00000379236 RGPD8O14715 1765 aaPredicted RBP35.87■■■■□ 3.33
TNFRSF4-201ENST00000379236 SAFB2Q14151 953 aaKnown RBP eCLIP35.86■■■■□ 3.33
TNFRSF4-201ENST00000379236 ZNF772Q68DY9 489 aaPredicted RBP35.85■■■■□ 3.33
TNFRSF4-201ENST00000379236 TRAK1Q9UPV9 953 aa35.82■■■■□ 3.32
TNFRSF4-201ENST00000379236 FOXO3O43524 673 aa35.79■■■■□ 3.32
TNFRSF4-201ENST00000379236 COL22A1Q8NFW1 1626 aaPredicted RBP35.77■■■■□ 3.32
TNFRSF4-201ENST00000379236 PXDNQ92626 1479 aa35.77■■■■□ 3.32
TNFRSF4-201ENST00000379236 ADGRB2O60241 1585 aa35.76■■■■□ 3.32
TNFRSF4-201ENST00000379236 KIAA1210Q9ULL0 1709 aa35.76■■■■□ 3.31
TNFRSF4-201ENST00000379236 C8orf37Q96NL8 207 aa35.75■■■■□ 3.31
TNFRSF4-201ENST00000379236 ARHGEF28Q8N1W1 1705 aaKnown RBP35.74■■■■□ 3.31
TNFRSF4-201ENST00000379236 XPCQ01831 940 aaPredicted RBP35.74■■■■□ 3.31
TNFRSF4-201ENST00000379236 AFF2P51816 1311 aa35.73■■■■□ 3.31
TNFRSF4-201ENST00000379236 ADAMTS2O95450 1211 aa35.71■■■■□ 3.31
TNFRSF4-201ENST00000379236 MINK1Q8N4C8 1332 aaPredicted RBP35.68■■■■□ 3.3
TNFRSF4-201ENST00000379236 PHF8Q9UPP1 1060 aa35.68■■■■□ 3.3
TNFRSF4-201ENST00000379236 EIF3AQ14152 1382 aaKnown RBP35.67■■■■□ 3.3
TNFRSF4-201ENST00000379236 MARF1Q9Y4F3 1742 aaKnown RBP35.67■■■■□ 3.3
TNFRSF4-201ENST00000379236 HIRIP3Q9BW71 556 aaPredicted RBP35.67■■■■□ 3.3
TNFRSF4-201ENST00000379236 ANKARQ7Z5J8 1434 aa35.66■■■■□ 3.3
TNFRSF4-201ENST00000379236 USP32Q8NFA0 1604 aa35.66■■■■□ 3.3
TNFRSF4-201ENST00000379236 NGLY1Q96IV0 654 aa35.66■■■■□ 3.3
TNFRSF4-201ENST00000379236 KRT28Q7Z3Y7 464 aa35.63■■■■□ 3.29
TNFRSF4-201ENST00000379236 RXRBP28702 533 aa35.62■■■■□ 3.29
TNFRSF4-201ENST00000379236 PSME1Q06323 249 aa35.62■■■■□ 3.29
TNFRSF4-201ENST00000379236 TULP4Q9NRJ4 1543 aa35.6■■■■□ 3.29
TNFRSF4-201ENST00000379236 ITSN1Q15811 1721 aa35.6■■■■□ 3.29
TNFRSF4-201ENST00000379236 SPATA31A3Q5VYP0 1347 aa35.57■■■■□ 3.29
TNFRSF4-201ENST00000379236 WASLO00401 505 aaPredicted RBP35.56■■■■□ 3.28
TNFRSF4-201ENST00000379236 PMFBP1Q8TBY8 1022 aa35.56■■■■□ 3.28
TNFRSF4-201ENST00000379236 TNS3Q68CZ2 1445 aa35.55■■■■□ 3.28
TNFRSF4-201ENST00000379236 NEUROD1Q13562 356 aa35.54■■■■□ 3.28
TNFRSF4-201ENST00000379236 QTRT2Q9H974 415 aaKnown RBP35.54■■■■□ 3.28
TNFRSF4-201ENST00000379236 SIN3AQ96ST3 1273 aa35.53■■■■□ 3.28
TNFRSF4-201ENST00000379236 USP21Q9UK80 565 aa35.52■■■■□ 3.28
TNFRSF4-201ENST00000379236 HAP1P54257 671 aaPredicted RBP35.51■■■■□ 3.28
TNFRSF4-201ENST00000379236 LMOD2Q6P5Q4 547 aa35.51■■■■□ 3.28
TNFRSF4-201ENST00000379236 CDK12Q9NYV4 1490 aaPredicted RBP35.5■■■■□ 3.27
TNFRSF4-201ENST00000379236 L3MBTL2Q969R5 705 aa35.5■■■■□ 3.27
TNFRSF4-201ENST00000379236 SBNO1A3KN83 1393 aa35.49■■■■□ 3.27
TNFRSF4-201ENST00000379236 RBM6P78332 1123 aaKnown RBP35.48■■■■□ 3.27
TNFRSF4-201ENST00000379236 NBPF1Q3BBV0 1214 aa35.48■■■■□ 3.27
TNFRSF4-201ENST00000379236 GPRASP1Q5JY77 1395 aa35.48■■■■□ 3.27
TNFRSF4-201ENST00000379236 PRR36Q9H6K5 1346 aa35.47■■■■□ 3.27
TNFRSF4-201ENST00000379236 ARHGEF10O15013 1369 aa35.47■■■■□ 3.27
TNFRSF4-201ENST00000379236 TRPM3Q9HCF6 1732 aaPredicted RBP35.46■■■■□ 3.27
TNFRSF4-201ENST00000379236 PLEKHG5O94827 1062 aa35.45■■■■□ 3.27
TNFRSF4-201ENST00000379236 ABCA3Q99758 1704 aa35.45■■■■□ 3.27
TNFRSF4-201ENST00000379236 TRPM1Q7Z4N2 1603 aa35.44■■■■□ 3.26
TNFRSF4-201ENST00000379236 TRIM26Q12899 539 aaPredicted RBP35.44■■■■□ 3.26
TNFRSF4-201ENST00000379236 FNBP4Q8N3X1 1017 aaPredicted RBP35.44■■■■□ 3.26
TNFRSF4-201ENST00000379236 NGDNQ8NEJ9 315 aaKnown RBP35.44■■■■□ 3.26
TNFRSF4-201ENST00000379236 TRPC5Q9UL62 973 aaPredicted RBP35.44■■■■□ 3.26
TNFRSF4-201ENST00000379236 QRICH2Q9H0J4 1663 aa35.43■■■■□ 3.26
TNFRSF4-201ENST00000379236 ATP7BP35670 1465 aa35.41■■■■□ 3.26
TNFRSF4-201ENST00000379236 NUDT16Q96DE0 195 aaKnown RBP35.4■■■■□ 3.26
TNFRSF4-201ENST00000379236 CDK19Q9BWU1 502 aa35.4■■■■□ 3.26
TNFRSF4-201ENST00000379236 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.4■■■■□ 3.26
TNFRSF4-201ENST00000379236 ALS2Q96Q42 1657 aa35.39■■■■□ 3.26
TNFRSF4-201ENST00000379236 CENPJQ9HC77 1338 aaPredicted RBP35.38■■■■□ 3.25
TNFRSF4-201ENST00000379236 TOPAZ1Q8N9V7 1692 aa35.38■■■■□ 3.25
TNFRSF4-201ENST00000379236 RGS12O14924 1447 aa35.38■■■■□ 3.25
TNFRSF4-201ENST00000379236 ATRNO75882 1429 aa35.36■■■■□ 3.25
TNFRSF4-201ENST00000379236 CABLES1Q8TDN4 633 aa35.35■■■■□ 3.25
TNFRSF4-201ENST00000379236 PLCH1Q4KWH8 1693 aa35.34■■■■□ 3.25
TNFRSF4-201ENST00000379236 PAK3O75914 559 aaPredicted RBP35.34■■■■□ 3.25
TNFRSF4-201ENST00000379236 ROCK2O75116 1388 aaKnown RBP35.32■■■■□ 3.24
TNFRSF4-201ENST00000379236 BCL9LQ86UU0 1499 aa35.32■■■■□ 3.24
TNFRSF4-201ENST00000379236 NWD2Q9ULI1 1742 aa35.3■■■■□ 3.24
TNFRSF4-201ENST00000379236 SRPK2P78362 688 aaKnown RBP35.3■■■■□ 3.24
TNFRSF4-201ENST00000379236 SLIT2O94813 1529 aa35.28■■■■□ 3.24
TNFRSF4-201ENST00000379236 CCDC61Q9Y6R9 512 aa35.28■■■■□ 3.24
TNFRSF4-201ENST00000379236 UNC5CLQ8IV45 518 aa35.27■■■■□ 3.24
TNFRSF4-201ENST00000379236 TONSLQ96HA7 1378 aa35.26■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms