RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 FAM135BQ49AJ0 1406 aa31.5■■■□□ 2.63
GFRA3-202ENST00000378362 MST1RQ04912 1400 aa31.47■■■□□ 2.63
GFRA3-202ENST00000378362 CCER1Q8TC90 406 aaPredicted RBP31.47■■■□□ 2.63
GFRA3-202ENST00000378362 HIRIP3Q9BW71 556 aaPredicted RBP31.47■■■□□ 2.63
GFRA3-202ENST00000378362 DDX17Q92841 729 aaKnown RBP31.46■■■□□ 2.63
GFRA3-202ENST00000378362 DCCP43146 1447 aa31.45■■■□□ 2.63
GFRA3-202ENST00000378362 BRINP3Q76B58 766 aa31.45■■■□□ 2.63
GFRA3-202ENST00000378362 ORAI2Q96SN7 254 aa31.44■■■□□ 2.62
GFRA3-202ENST00000378362 MINK1Q8N4C8 1332 aaPredicted RBP31.43■■■□□ 2.62
GFRA3-202ENST00000378362 SIRT1Q96EB6 747 aa31.42■■■□□ 2.62
GFRA3-202ENST00000378362 KIAA1210Q9ULL0 1709 aa31.4■■■□□ 2.62
GFRA3-202ENST00000378362 C1orf167Q5SNV9 1468 aa31.38■■■□□ 2.61
GFRA3-202ENST00000378362 DLC1Q96QB1 1528 aa31.38■■■□□ 2.61
GFRA3-202ENST00000378362 TRPM1Q7Z4N2 1603 aa31.36■■■□□ 2.61
GFRA3-202ENST00000378362 ARHGEF28Q8N1W1 1705 aaKnown RBP31.35■■■□□ 2.61
GFRA3-202ENST00000378362 ROCK2O75116 1388 aaKnown RBP31.35■■■□□ 2.61
GFRA3-202ENST00000378362 ESCO1Q5FWF5 840 aa31.35■■■□□ 2.61
GFRA3-202ENST00000378362 CDC42BPGQ6DT37 1551 aa31.33■■■□□ 2.61
GFRA3-202ENST00000378362 PHLPP1O60346 1717 aa31.32■■■□□ 2.6
GFRA3-202ENST00000378362 RGPD8O14715 1765 aaPredicted RBP31.29■■■□□ 2.6
GFRA3-202ENST00000378362 XPCQ01831 940 aaPredicted RBP31.27■■■□□ 2.6
GFRA3-202ENST00000378362 FMN2Q9NZ56 1722 aa31.26■■■□□ 2.6
GFRA3-202ENST00000378362 CLSPNQ9HAW4 1339 aa31.25■■■□□ 2.59
GFRA3-202ENST00000378362 FOXO3O43524 673 aa31.25■■■□□ 2.59
GFRA3-202ENST00000378362 CARD11Q9BXL7 1154 aa31.24■■■□□ 2.59
GFRA3-202ENST00000378362 WASLO00401 505 aaPredicted RBP31.23■■■□□ 2.59
GFRA3-202ENST00000378362 COL16A1Q07092 1604 aaPredicted RBP31.23■■■□□ 2.59
GFRA3-202ENST00000378362 CENPJQ9HC77 1338 aaPredicted RBP31.22■■■□□ 2.59
GFRA3-202ENST00000378362 AHDC1Q5TGY3 1603 aaPredicted RBP31.21■■■□□ 2.59
GFRA3-202ENST00000378362 PMFBP1Q8TBY8 1022 aa31.21■■■□□ 2.59
GFRA3-202ENST00000378362 PRR36Q9H6K5 1346 aa31.21■■■□□ 2.59
GFRA3-202ENST00000378362 CDK19Q9BWU1 502 aa31.19■■■□□ 2.58
GFRA3-202ENST00000378362 NHSL1Q5SYE7 1610 aa31.18■■■□□ 2.58
GFRA3-202ENST00000378362 ADGRB2O60241 1585 aa31.17■■■□□ 2.58
GFRA3-202ENST00000378362 USP32Q8NFA0 1604 aa31.17■■■□□ 2.58
GFRA3-202ENST00000378362 RALGAPBQ86X10 1494 aa31.17■■■□□ 2.58
GFRA3-202ENST00000378362 GPRASP1Q5JY77 1395 aa31.16■■■□□ 2.58
GFRA3-202ENST00000378362 PHF8Q9UPP1 1060 aa31.14■■■□□ 2.58
GFRA3-202ENST00000378362 QRICH2Q9H0J4 1663 aa31.14■■■□□ 2.57
GFRA3-202ENST00000378362 CABP2Q9NPB3 220 aa31.12■■■□□ 2.57
GFRA3-202ENST00000378362 JCADQ9P266 1359 aa31.12■■■□□ 2.57
GFRA3-202ENST00000378362 DISP3Q9P2K9 1392 aa31.12■■■□□ 2.57
GFRA3-202ENST00000378362 NUDT16Q96DE0 195 aaKnown RBP31.12■■■□□ 2.57
GFRA3-202ENST00000378362 LRRC59Q96AG4 307 aaKnown RBP31.1■■■□□ 2.57
GFRA3-202ENST00000378362 SOS2Q07890 1332 aaPredicted RBP31.1■■■□□ 2.57
GFRA3-202ENST00000378362 SRPK2P78362 688 aaKnown RBP31.1■■■□□ 2.57
GFRA3-202ENST00000378362 NPHP3Q7Z494 1330 aa31.09■■■□□ 2.57
GFRA3-202ENST00000378362 NUTM2BA6NNL0 878 aaPredicted RBP31.09■■■□□ 2.57
GFRA3-202ENST00000378362 NUTM2EB1AL46 878 aaPredicted RBP31.09■■■□□ 2.57
GFRA3-202ENST00000378362 NUTM2AQ8IVF1 878 aaPredicted RBP31.09■■■□□ 2.57
GFRA3-202ENST00000378362 MED1Q15648 1581 aaPredicted RBP31.08■■■□□ 2.57
GFRA3-202ENST00000378362 TULP4Q9NRJ4 1543 aa31.08■■■□□ 2.57
GFRA3-202ENST00000378362 TIMELESSQ9UNS1 1208 aa31.08■■■□□ 2.57
GFRA3-202ENST00000378362 PLEKHG5O94827 1062 aa31.07■■■□□ 2.56
GFRA3-202ENST00000378362 KRT28Q7Z3Y7 464 aa31.06■■■□□ 2.56
GFRA3-202ENST00000378362 ANKARQ7Z5J8 1434 aa31.06■■■□□ 2.56
GFRA3-202ENST00000378362 EIF3AQ14152 1382 aaKnown RBP31.05■■■□□ 2.56
GFRA3-202ENST00000378362 ATP7BP35670 1465 aa31.05■■■□□ 2.56
GFRA3-202ENST00000378362 PXDNQ92626 1479 aa31.05■■■□□ 2.56
GFRA3-202ENST00000378362 PSME1Q06323 249 aa31.03■■■□□ 2.56
GFRA3-202ENST00000378362 ST20-MTHFSA0A0A6YYL1 179 aa31.01■■■□□ 2.56
GFRA3-202ENST00000378362 NGDNQ8NEJ9 315 aaKnown RBP31.01■■■□□ 2.56
GFRA3-202ENST00000378362 PNPLA6Q8IY17 1366 aa31■■■□□ 2.55
GFRA3-202ENST00000378362 KIF1AQ12756 1690 aa31■■■□□ 2.55
GFRA3-202ENST00000378362 LMOD2Q6P5Q4 547 aa30.99■■■□□ 2.55
GFRA3-202ENST00000378362 LRP6O75581 1613 aa30.99■■■□□ 2.55
GFRA3-202ENST00000378362 CCDC61Q9Y6R9 512 aa30.98■■■□□ 2.55
GFRA3-202ENST00000378362 SHPRHQ149N8 1683 aa30.98■■■□□ 2.55
GFRA3-202ENST00000378362 EVC2Q86UK5 1308 aa30.98■■■□□ 2.55
GFRA3-202ENST00000378362 PHF23Q9BUL5 403 aaPredicted RBP30.97■■■□□ 2.55
GFRA3-202ENST00000378362 CABP1Q9NZU7 370 aa30.94■■■□□ 2.54
GFRA3-202ENST00000378362 ACEP12821 1306 aa30.94■■■□□ 2.54
GFRA3-202ENST00000378362 SPATA31A6Q5VVP1 1343 aa30.94■■■□□ 2.54
GFRA3-202ENST00000378362 USP47Q96K76 1375 aa30.93■■■□□ 2.54
GFRA3-202ENST00000378362 SPATA31A3Q5VYP0 1347 aa30.93■■■□□ 2.54
GFRA3-202ENST00000378362 ADAMTS2O95450 1211 aa30.93■■■□□ 2.54
GFRA3-202ENST00000378362 MEX3CQ5U5Q3 659 aaKnown RBP30.93■■■□□ 2.54
GFRA3-202ENST00000378362 PAK3O75914 559 aaPredicted RBP30.92■■■□□ 2.54
GFRA3-202ENST00000378362 PPIP5K1Q6PFW1 1433 aa30.92■■■□□ 2.54
GFRA3-202ENST00000378362 CABLES1Q8TDN4 633 aa30.91■■■□□ 2.54
GFRA3-202ENST00000378362 TESK2Q96S53 571 aa30.91■■■□□ 2.54
GFRA3-202ENST00000378362 RGS17Q9UGC6 210 aaPredicted RBP30.91■■■□□ 2.54
GFRA3-202ENST00000378362 ITSN1Q15811 1721 aa30.91■■■□□ 2.54
GFRA3-202ENST00000378362 TOPAZ1Q8N9V7 1692 aa30.89■■■□□ 2.54
GFRA3-202ENST00000378362 PLEKHG3A1L390 1219 aa30.88■■■□□ 2.53
GFRA3-202ENST00000378362 ILDR2Q71H61 639 aa30.87■■■□□ 2.53
GFRA3-202ENST00000378362 NUTM2GQ5VZR2 741 aa30.85■■■□□ 2.53
GFRA3-202ENST00000378362 TNS3Q68CZ2 1445 aa30.85■■■□□ 2.53
GFRA3-202ENST00000378362 C8orf37Q96NL8 207 aa30.84■■■□□ 2.53
GFRA3-202ENST00000378362 SBNO2Q9Y2G9 1366 aa30.84■■■□□ 2.53
GFRA3-202ENST00000378362 POLR3AO14802 1390 aaPredicted RBP30.82■■■□□ 2.52
GFRA3-202ENST00000378362 TRPM3Q9HCF6 1732 aaPredicted RBP30.82■■■□□ 2.52
GFRA3-202ENST00000378362 SBNO1A3KN83 1393 aa30.82■■■□□ 2.52
GFRA3-202ENST00000378362 TMC1Q8TDI8 760 aa30.82■■■□□ 2.52
GFRA3-202ENST00000378362 SLC12A5Q9H2X9 1139 aa30.78■■■□□ 2.52
GFRA3-202ENST00000378362 COL22A1Q8NFW1 1626 aaPredicted RBP30.78■■■□□ 2.52
GFRA3-202ENST00000378362 POTEAQ6S8J7 498 aa30.77■■■□□ 2.52
GFRA3-202ENST00000378362 HAP1P54257 671 aaPredicted RBP30.77■■■□□ 2.52
GFRA3-202ENST00000378362 NGLY1Q96IV0 654 aa30.75■■■□□ 2.51
GFRA3-202ENST00000378362 ATAD2Q6PL18 1390 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms