RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 CLUAP1Q96AJ1 413 aa26.33■■□□□ 1.81
CLN5-201ENST00000377453 KIF1BO60333 1816 aa26.32■■□□□ 1.8
CLN5-201ENST00000377453 POLR3AO14802 1390 aaPredicted RBP26.32■■□□□ 1.8
CLN5-201ENST00000377453 CYB5RLQ6IPT4 315 aa26.31■■□□□ 1.8
CLN5-201ENST00000377453 USP35Q9P2H5 1018 aa26.31■■□□□ 1.8
CLN5-201ENST00000377453 KIDINS220Q9ULH0 1771 aa26.29■■□□□ 1.8
CLN5-201ENST00000377453 NPATQ14207 1427 aa26.28■■□□□ 1.8
CLN5-201ENST00000377453 RARSP54136 660 aaKnown RBP26.28■■□□□ 1.8
CLN5-201ENST00000377453 RUNDC1Q96C34 613 aa26.28■■□□□ 1.8
CLN5-201ENST00000377453 C14orf93Q9H972 538 aaKnown RBP26.28■■□□□ 1.8
CLN5-201ENST00000377453 IFT172Q9UG01 1749 aa26.27■■□□□ 1.8
CLN5-201ENST00000377453 NRXN1Q9ULB1 1477 aa26.27■■□□□ 1.8
CLN5-201ENST00000377453 CABP2Q9NPB3 220 aa26.26■■□□□ 1.79
CLN5-201ENST00000377453 CGNL1Q0VF96 1302 aa26.26■■□□□ 1.79
CLN5-201ENST00000377453 PCDHB15Q9Y5E8 787 aa26.26■■□□□ 1.79
CLN5-201ENST00000377453 USP19O94966 1318 aa26.25■■□□□ 1.79
CLN5-201ENST00000377453 FRAT2O75474 233 aaPredicted RBP26.25■■□□□ 1.79
CLN5-201ENST00000377453 PDE3AQ14432 1141 aa26.25■■□□□ 1.79
CLN5-201ENST00000377453 SHPRHQ149N8 1683 aa26.24■■□□□ 1.79
CLN5-201ENST00000377453 ADGRB3O60242 1522 aa26.24■■□□□ 1.79
CLN5-201ENST00000377453 U2AF1L5P0DN76 240 aaPredicted RBP26.22■■□□□ 1.79
CLN5-201ENST00000377453 U2AF1Q01081 240 aaKnown RBP eCLIP26.22■■□□□ 1.79
CLN5-201ENST00000377453 STK26Q9P289 416 aa26.22■■□□□ 1.79
CLN5-201ENST00000377453 SBNO2Q9Y2G9 1366 aa26.22■■□□□ 1.79
CLN5-201ENST00000377453 SLC24A1O60721 1099 aa26.21■■□□□ 1.79
CLN5-201ENST00000377453 BRPF3Q9ULD4 1205 aa26.2■■□□□ 1.79
CLN5-201ENST00000377453 ZNF518AQ6AHZ1 1483 aa26.2■■□□□ 1.79
CLN5-201ENST00000377453 TSR2Q969E8 191 aaKnown RBP26.2■■□□□ 1.78
CLN5-201ENST00000377453 QRICH2Q9H0J4 1663 aa26.19■■□□□ 1.78
CLN5-201ENST00000377453 MYO3AQ8NEV4 1616 aa26.19■■□□□ 1.78
CLN5-201ENST00000377453 NEURL4Q96JN8 1562 aa26.19■■□□□ 1.78
CLN5-201ENST00000377453 CD109Q6YHK3 1445 aa26.19■■□□□ 1.78
CLN5-201ENST00000377453 ADGRB1O14514 1584 aa26.19■■□□□ 1.78
CLN5-201ENST00000377453 RAPGEF3O95398 923 aa26.18■■□□□ 1.78
CLN5-201ENST00000377453 GSE1Q14687 1217 aa26.18■■□□□ 1.78
CLN5-201ENST00000377453 IQSEC2Q5JU85 1478 aa26.17■■□□□ 1.78
CLN5-201ENST00000377453 GGNBP2Q9H3C7 697 aa26.15■■□□□ 1.78
CLN5-201ENST00000377453 FRMPD1Q5SYB0 1578 aa26.15■■□□□ 1.78
CLN5-201ENST00000377453 PHF23Q9BUL5 403 aaPredicted RBP26.15■■□□□ 1.78
CLN5-201ENST00000377453 U2SURPO15042 1029 aaKnown RBP26.14■■□□□ 1.78
CLN5-201ENST00000377453 PDZRN3Q9UPQ7 1066 aa26.14■■□□□ 1.78
CLN5-201ENST00000377453 NGEFQ8N5V2 710 aa26.14■■□□□ 1.77
CLN5-201ENST00000377453 CFAP53Q96M91 514 aa26.14■■□□□ 1.77
CLN5-201ENST00000377453 SLKQ9H2G2 1235 aaPredicted RBP26.13■■□□□ 1.77
CLN5-201ENST00000377453 SETBP1Q9Y6X0 1596 aa26.12■■□□□ 1.77
CLN5-201ENST00000377453 LMTK2Q8IWU2 1503 aa26.12■■□□□ 1.77
CLN5-201ENST00000377453 PPLO60437 1756 aa26.11■■□□□ 1.77
CLN5-201ENST00000377453 ZC3H13Q5T200 1668 aaKnown RBP26.11■■□□□ 1.77
CLN5-201ENST00000377453 TULP4Q9NRJ4 1543 aa26.1■■□□□ 1.77
CLN5-201ENST00000377453 WDR63Q8IWG1 891 aa26.1■■□□□ 1.77
CLN5-201ENST00000377453 EVC2Q86UK5 1308 aa26.1■■□□□ 1.77
CLN5-201ENST00000377453 MAPK8IP3Q9UPT6 1336 aa26.09■■□□□ 1.77
CLN5-201ENST00000377453 SRPK2P78362 688 aaKnown RBP26.09■■□□□ 1.77
CLN5-201ENST00000377453 POGZQ7Z3K3 1410 aa26.08■■□□□ 1.76
CLN5-201ENST00000377453 MINK1Q8N4C8 1332 aaPredicted RBP26.07■■□□□ 1.76
CLN5-201ENST00000377453 NINLQ9Y2I6 1382 aa26.06■■□□□ 1.76
CLN5-201ENST00000377453 EXOSC9Q06265 439 aaKnown RBP26.06■■□□□ 1.76
CLN5-201ENST00000377453 IDI1Q13907 227 aa26.06■■□□□ 1.76
CLN5-201ENST00000377453 GLI2P10070 1586 aa26.06■■□□□ 1.76
CLN5-201ENST00000377453 ANKRD36BQ8N2N9 1353 aa26.05■■□□□ 1.76
CLN5-201ENST00000377453 FBLN1P23142 703 aa26.05■■□□□ 1.76
CLN5-201ENST00000377453 SPRYD3Q8NCJ5 442 aa26.05■■□□□ 1.76
CLN5-201ENST00000377453 PMFBP1Q8TBY8 1022 aa26.05■■□□□ 1.76
CLN5-201ENST00000377453 ABCC3O15438 1527 aa26.04■■□□□ 1.76
CLN5-201ENST00000377453 A0A1W2PP64 1363 aa26.04■■□□□ 1.76
CLN5-201ENST00000377453 NLRP1Q9C000 1473 aa26.04■■□□□ 1.76
CLN5-201ENST00000377453 SIGLEC1Q9BZZ2 1709 aa26.04■■□□□ 1.76
CLN5-201ENST00000377453 MYH16Q9H6N6 1097 aa26.03■■□□□ 1.76
CLN5-201ENST00000377453 FTSJ3Q8IY81 847 aaKnown RBP26.02■■□□□ 1.76
CLN5-201ENST00000377453 SMC4Q9NTJ3 1288 aa26.02■■□□□ 1.76
CLN5-201ENST00000377453 MVPQ14764 893 aaKnown RBP26.01■■□□□ 1.76
CLN5-201ENST00000377453 VGFO15240 615 aaPredicted RBP26.01■■□□□ 1.75
CLN5-201ENST00000377453 RPGRIP1LQ68CZ1 1315 aa26.01■■□□□ 1.75
CLN5-201ENST00000377453 CCDC27Q2M243 656 aa26.01■■□□□ 1.75
CLN5-201ENST00000377453 ANO8Q9HCE9 1232 aaPredicted RBP26■■□□□ 1.75
CLN5-201ENST00000377453 TRIM35Q9UPQ4 493 aa26■■□□□ 1.75
CLN5-201ENST00000377453 ZKSCAN2Q63HK3 967 aa25.99■■□□□ 1.75
CLN5-201ENST00000377453 DZIP1LQ8IYY4 767 aaKnown RBP25.99■■□□□ 1.75
CLN5-201ENST00000377453 SSH1Q8WYL5 1049 aa25.99■■□□□ 1.75
CLN5-201ENST00000377453 HECW2Q9P2P5 1572 aa25.99■■□□□ 1.75
CLN5-201ENST00000377453 TMPOP42166 694 aaKnown RBP25.99■■□□□ 1.75
CLN5-201ENST00000377453 CAMSAP1Q5T5Y3 1602 aa25.98■■□□□ 1.75
CLN5-201ENST00000377453 TRIM27P14373 513 aa25.98■■□□□ 1.75
CLN5-201ENST00000377453 PLEKHF1Q96S99 279 aa25.98■■□□□ 1.75
CLN5-201ENST00000377453 RWDD1Q9H446 243 aaPredicted RBP25.98■■□□□ 1.75
CLN5-201ENST00000377453 POGKQ9P215 609 aa25.98■■□□□ 1.75
CLN5-201ENST00000377453 ITPRIPQ8IWB1 547 aa25.97■■□□□ 1.75
CLN5-201ENST00000377453 PRAM1Q96QH2 718 aa25.97■■□□□ 1.75
CLN5-201ENST00000377453 ARHGEF28Q8N1W1 1705 aaKnown RBP25.97■■□□□ 1.75
CLN5-201ENST00000377453 VIRMAQ69YN4 1812 aaKnown RBP25.96■■□□□ 1.75
CLN5-201ENST00000377453 NEXMIFQ5QGS0 1516 aa25.96■■□□□ 1.75
CLN5-201ENST00000377453 MLH3Q9UHC1 1453 aa25.96■■□□□ 1.75
CLN5-201ENST00000377453 FYB1O15117 783 aa25.95■■□□□ 1.74
CLN5-201ENST00000377453 FAM69CQ0P6D2 419 aa25.94■■□□□ 1.74
CLN5-201ENST00000377453 NOB1Q9ULX3 412 aaKnown RBP25.94■■□□□ 1.74
CLN5-201ENST00000377453 TBC1D32Q96NH3 1257 aa25.93■■□□□ 1.74
CLN5-201ENST00000377453 TBC1D2Q9BYX2 928 aa25.93■■□□□ 1.74
CLN5-201ENST00000377453 RIPK4P57078 832 aa25.92■■□□□ 1.74
CLN5-201ENST00000377453 USP32Q8NFA0 1604 aa25.92■■□□□ 1.74
CLN5-201ENST00000377453 FBXO31Q5XUX0 539 aaPredicted RBP25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms