RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 RUNDC1Q96C34 613 aa23.38■■□□□ 1.33
SF1-203ENST00000377387 RTN4Q9NQC3 1192 aaKnown RBP23.38■■□□□ 1.33
SF1-203ENST00000377387 MROH2AA6NES4 1674 aa23.38■■□□□ 1.33
SF1-203ENST00000377387 C14orf93Q9H972 538 aaKnown RBP23.38■■□□□ 1.33
SF1-203ENST00000377387 IL27Q8NEV9 243 aa23.37■■□□□ 1.33
SF1-203ENST00000377387 POLR3AO14802 1390 aaPredicted RBP23.37■■□□□ 1.33
SF1-203ENST00000377387 CABP2Q9NPB3 220 aa23.37■■□□□ 1.33
SF1-203ENST00000377387 STK26Q9P289 416 aa23.37■■□□□ 1.33
SF1-203ENST00000377387 CGNL1Q0VF96 1302 aa23.36■■□□□ 1.33
SF1-203ENST00000377387 KIAA1210Q9ULL0 1709 aa23.36■■□□□ 1.33
SF1-203ENST00000377387 ZNF518AQ6AHZ1 1483 aa23.36■■□□□ 1.33
SF1-203ENST00000377387 U2AF1L5P0DN76 240 aaPredicted RBP23.36■■□□□ 1.33
SF1-203ENST00000377387 U2AF1Q01081 240 aaKnown RBP eCLIP23.36■■□□□ 1.334e-10■■■■■ 47.9
SF1-203ENST00000377387 NPATQ14207 1427 aa23.35■■□□□ 1.33
SF1-203ENST00000377387 EFCAB6Q5THR3 1501 aa23.35■■□□□ 1.33
SF1-203ENST00000377387 PDE3AQ14432 1141 aa23.35■■□□□ 1.33
SF1-203ENST00000377387 RLBP1P12271 317 aa23.35■■□□□ 1.33
SF1-203ENST00000377387 SEC24BO95487 1268 aa23.34■■□□□ 1.33
SF1-203ENST00000377387 RARSP54136 660 aaKnown RBP23.34■■□□□ 1.33
SF1-203ENST00000377387 CFAP53Q96M91 514 aa23.32■■□□□ 1.32
SF1-203ENST00000377387 CYB5RLQ6IPT4 315 aa23.3■■□□□ 1.32
SF1-203ENST00000377387 NGEFQ8N5V2 710 aa23.3■■□□□ 1.32
SF1-203ENST00000377387 PCDHB15Q9Y5E8 787 aa23.3■■□□□ 1.32
SF1-203ENST00000377387 U2SURPO15042 1029 aaKnown RBP23.29■■□□□ 1.32
SF1-203ENST00000377387 POGZQ7Z3K3 1410 aa23.29■■□□□ 1.32
SF1-203ENST00000377387 SBNO2Q9Y2G9 1366 aa23.28■■□□□ 1.32
SF1-203ENST00000377387 FRAT2O75474 233 aaPredicted RBP23.28■■□□□ 1.32
SF1-203ENST00000377387 FRMPD1Q5SYB0 1578 aa23.28■■□□□ 1.32
SF1-203ENST00000377387 TSR2Q969E8 191 aaKnown RBP23.27■■□□□ 1.32
SF1-203ENST00000377387 GGNBP2Q9H3C7 697 aa23.27■■□□□ 1.32
SF1-203ENST00000377387 SRPK2P78362 688 aaKnown RBP23.26■■□□□ 1.31
SF1-203ENST00000377387 NRXN1Q9ULB1 1477 aa23.26■■□□□ 1.31
SF1-203ENST00000377387 EVC2Q86UK5 1308 aa23.26■■□□□ 1.31
SF1-203ENST00000377387 GSE1Q14687 1217 aa23.24■■□□□ 1.31
SF1-203ENST00000377387 IFT172Q9UG01 1749 aa23.24■■□□□ 1.31
SF1-203ENST00000377387 ADGRB3O60242 1522 aa23.23■■□□□ 1.31
SF1-203ENST00000377387 WDR63Q8IWG1 891 aa23.23■■□□□ 1.31
SF1-203ENST00000377387 USP19O94966 1318 aa23.22■■□□□ 1.31
SF1-203ENST00000377387 IDI1Q13907 227 aa23.22■■□□□ 1.31
SF1-203ENST00000377387 VGFO15240 615 aaPredicted RBP23.22■■□□□ 1.31
SF1-203ENST00000377387 QRICH2Q9H0J4 1663 aa23.22■■□□□ 1.31
SF1-203ENST00000377387 PDZRN3Q9UPQ7 1066 aa23.22■■□□□ 1.31
SF1-203ENST00000377387 SLKQ9H2G2 1235 aaPredicted RBP23.21■■□□□ 1.31
SF1-203ENST00000377387 NEURL4Q96JN8 1562 aa23.21■■□□□ 1.31
SF1-203ENST00000377387 MINK1Q8N4C8 1332 aaPredicted RBP23.2■■□□□ 1.31
SF1-203ENST00000377387 MAPK8IP3Q9UPT6 1336 aa23.2■■□□□ 1.31
SF1-203ENST00000377387 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
SF1-203ENST00000377387 FBXO31Q5XUX0 539 aaPredicted RBP23.19■■□□□ 1.3
SF1-203ENST00000377387 FTSJ3Q8IY81 847 aaKnown RBP23.19■■□□□ 1.3
SF1-203ENST00000377387 MYH16Q9H6N6 1097 aa23.19■■□□□ 1.3
SF1-203ENST00000377387 YEATS2Q9ULM3 1422 aa23.19■■□□□ 1.3
SF1-203ENST00000377387 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
SF1-203ENST00000377387 SHPRHQ149N8 1683 aa23.19■■□□□ 1.3
SF1-203ENST00000377387 BRPF3Q9ULD4 1205 aa23.19■■□□□ 1.3
SF1-203ENST00000377387 ADGRB1O14514 1584 aa23.18■■□□□ 1.3
SF1-203ENST00000377387 MYO3AQ8NEV4 1616 aa23.17■■□□□ 1.3
SF1-203ENST00000377387 RPGRIP1LQ68CZ1 1315 aa23.17■■□□□ 1.3
SF1-203ENST00000377387 EXOSC9Q06265 439 aaKnown RBP23.17■■□□□ 1.3
SF1-203ENST00000377387 SMC4Q9NTJ3 1288 aa23.16■■□□□ 1.3
SF1-203ENST00000377387 HECW2Q9P2P5 1572 aa23.16■■□□□ 1.3
SF1-203ENST00000377387 NINLQ9Y2I6 1382 aa23.16■■□□□ 1.3
SF1-203ENST00000377387 LMTK2Q8IWU2 1503 aa23.16■■□□□ 1.3
SF1-203ENST00000377387 SETBP1Q9Y6X0 1596 aa23.16■■□□□ 1.3
SF1-203ENST00000377387 MLH3Q9UHC1 1453 aa23.16■■□□□ 1.3
SF1-203ENST00000377387 ABCC3O15438 1527 aa23.15■■□□□ 1.3
SF1-203ENST00000377387 ANKRD36BQ8N2N9 1353 aa23.15■■□□□ 1.3
SF1-203ENST00000377387 PPLO60437 1756 aa23.14■■□□□ 1.3
SF1-203ENST00000377387 SPRYD3Q8NCJ5 442 aa23.14■■□□□ 1.3
SF1-203ENST00000377387 RWDD1Q9H446 243 aaPredicted RBP23.14■■□□□ 1.3
SF1-203ENST00000377387 POGKQ9P215 609 aa23.14■■□□□ 1.3
SF1-203ENST00000377387 FBLN1P23142 703 aa23.14■■□□□ 1.29
SF1-203ENST00000377387 MLECQ14165 292 aa23.14■■□□□ 1.29
SF1-203ENST00000377387 IQSEC2Q5JU85 1478 aa23.14■■□□□ 1.29
SF1-203ENST00000377387 ZKSCAN2Q63HK3 967 aa23.13■■□□□ 1.29
SF1-203ENST00000377387 SIGLEC1Q9BZZ2 1709 aa23.13■■□□□ 1.29
SF1-203ENST00000377387 DZIP1LQ8IYY4 767 aaKnown RBP23.13■■□□□ 1.29
SF1-203ENST00000377387 MVPQ14764 893 aaKnown RBP23.12■■□□□ 1.29
SF1-203ENST00000377387 CCDC27Q2M243 656 aa23.12■■□□□ 1.29
SF1-203ENST00000377387 PRAM1Q96QH2 718 aa23.12■■□□□ 1.29
SF1-203ENST00000377387 A0A1W2PP64 1363 aa23.12■■□□□ 1.29
SF1-203ENST00000377387 TMPOP42166 694 aaKnown RBP23.11■■□□□ 1.29
SF1-203ENST00000377387 ITPRIPQ8IWB1 547 aa23.11■■□□□ 1.29
SF1-203ENST00000377387 TULP4Q9NRJ4 1543 aa23.11■■□□□ 1.29
SF1-203ENST00000377387 UPF2Q9HAU5 1272 aaKnown RBP23.1■■□□□ 1.29
SF1-203ENST00000377387 SSH1Q8WYL5 1049 aa23.09■■□□□ 1.29
SF1-203ENST00000377387 GLI2P10070 1586 aa23.09■■□□□ 1.29
SF1-203ENST00000377387 BECN1Q14457 450 aa23.09■■□□□ 1.29
SF1-203ENST00000377387 FYB1O15117 783 aa23.09■■□□□ 1.29
SF1-203ENST00000377387 RIPK4P57078 832 aa23.09■■□□□ 1.29
SF1-203ENST00000377387 FAM69CQ0P6D2 419 aa23.08■■□□□ 1.29
SF1-203ENST00000377387 TRIM35Q9UPQ4 493 aa23.08■■□□□ 1.29
SF1-203ENST00000377387 ZC3H13Q5T200 1668 aaKnown RBP23.07■■□□□ 1.28
SF1-203ENST00000377387 TRIM27P14373 513 aa23.07■■□□□ 1.28
SF1-203ENST00000377387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.07■■□□□ 1.28
SF1-203ENST00000377387 NOB1Q9ULX3 412 aaKnown RBP23.06■■□□□ 1.28
SF1-203ENST00000377387 PLEKHF1Q96S99 279 aa23.06■■□□□ 1.28
SF1-203ENST00000377387 STAG3Q9UJ98 1225 aa23.05■■□□□ 1.28
SF1-203ENST00000377387 DIP2CQ9Y2E4 1556 aa23.04■■□□□ 1.28
SF1-203ENST00000377387 CAMSAP1Q5T5Y3 1602 aa23.04■■□□□ 1.28
SF1-203ENST00000377387 TERF2IPQ9NYB0 399 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms