RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 TCERG1O14776 1098 aaKnown RBP22.44■■□□□ 1.18
TRIM27-201ENST00000377194 APAF1O14727 1248 aa22.43■■□□□ 1.18
TRIM27-201ENST00000377194 ZC3H13Q5T200 1668 aaKnown RBP22.43■■□□□ 1.18
TRIM27-201ENST00000377194 NSD3Q9BZ95 1437 aa22.43■■□□□ 1.18
TRIM27-201ENST00000377194 GOLGA2Q08379 1002 aa22.43■■□□□ 1.18
TRIM27-201ENST00000377194 USP35Q9P2H5 1018 aa22.43■■□□□ 1.18
TRIM27-201ENST00000377194 FAM69CQ0P6D2 419 aa22.41■■□□□ 1.18
TRIM27-201ENST00000377194 C20orf194Q5TEA3 1177 aa22.41■■□□□ 1.18
TRIM27-201ENST00000377194 GLI2P10070 1586 aa22.41■■□□□ 1.18
TRIM27-201ENST00000377194 TNNT2P45379 298 aaPredicted RBP22.4■■□□□ 1.18
TRIM27-201ENST00000377194 SPINK5Q9NQ38 1064 aaPredicted RBP22.4■■□□□ 1.18
TRIM27-201ENST00000377194 SLC52A1Q9NWF4 448 aa22.4■■□□□ 1.18
TRIM27-201ENST00000377194 CRBNQ96SW2 442 aa22.39■■□□□ 1.18
TRIM27-201ENST00000377194 BACH2Q9BYV9 841 aa22.39■■□□□ 1.18
TRIM27-201ENST00000377194 FBXO31Q5XUX0 539 aaPredicted RBP22.39■■□□□ 1.17
TRIM27-201ENST00000377194 SLFN5Q08AF3 891 aa22.38■■□□□ 1.17
TRIM27-201ENST00000377194 SAFB2Q14151 953 aaKnown RBP eCLIP22.38■■□□□ 1.17
TRIM27-201ENST00000377194 MORC1Q86VD1 984 aa22.37■■□□□ 1.17
TRIM27-201ENST00000377194 SKAP1Q86WV1 359 aa22.37■■□□□ 1.17
TRIM27-201ENST00000377194 PPM1GO15355 546 aaPredicted RBP22.37■■□□□ 1.17
TRIM27-201ENST00000377194 POLR3AO14802 1390 aaPredicted RBP22.35■■□□□ 1.17
TRIM27-201ENST00000377194 TRMT2AQ8IZ69 625 aaKnown RBP22.35■■□□□ 1.17
TRIM27-201ENST00000377194 STK26Q9P289 416 aa22.35■■□□□ 1.17
TRIM27-201ENST00000377194 CABP2Q9NPB3 220 aa22.35■■□□□ 1.17
TRIM27-201ENST00000377194 DMRT2Q9Y5R5 561 aa22.35■■□□□ 1.17
TRIM27-201ENST00000377194 ARHGEF28Q8N1W1 1705 aaKnown RBP22.35■■□□□ 1.17
TRIM27-201ENST00000377194 TULP4Q9NRJ4 1543 aa22.34■■□□□ 1.17
TRIM27-201ENST00000377194 EVC2Q86UK5 1308 aa22.34■■□□□ 1.17
TRIM27-201ENST00000377194 MYO5BQ9ULV0 1848 aa22.34■■□□□ 1.17
TRIM27-201ENST00000377194 GSE1Q14687 1217 aa22.34■■□□□ 1.17
TRIM27-201ENST00000377194 SLC4A3P48751 1232 aa22.33■■□□□ 1.17
TRIM27-201ENST00000377194 ZFYVE9O95405 1425 aa22.33■■□□□ 1.16
TRIM27-201ENST00000377194 PREX1Q8TCU6 1659 aa22.32■■□□□ 1.16
TRIM27-201ENST00000377194 MS4A1P11836 297 aa22.31■■□□□ 1.16
TRIM27-201ENST00000377194 TMEM131LA2VDJ0 1609 aa22.31■■□□□ 1.16
TRIM27-201ENST00000377194 PUS7Q96PZ0 661 aaKnown RBP22.3■■□□□ 1.16
TRIM27-201ENST00000377194 RIMBP3CA6NJZ7 1639 aa22.3■■□□□ 1.16
TRIM27-201ENST00000377194 RIMBP3BA6NNM3 1639 aa22.3■■□□□ 1.16
TRIM27-201ENST00000377194 RIMBP3Q9UFD9 1639 aa22.3■■□□□ 1.16
TRIM27-201ENST00000377194 CGNL1Q0VF96 1302 aa22.29■■□□□ 1.16
TRIM27-201ENST00000377194 FRAT1Q92837 279 aaPredicted RBP22.29■■□□□ 1.16
TRIM27-201ENST00000377194 MTHFSP49914 203 aa22.29■■□□□ 1.16
TRIM27-201ENST00000377194 DIP2BQ9P265 1576 aa22.28■■□□□ 1.16
TRIM27-201ENST00000377194 TSPOAP1O95153 1857 aa22.28■■□□□ 1.16
TRIM27-201ENST00000377194 NFKBIBQ15653 356 aa22.27■■□□□ 1.16
TRIM27-201ENST00000377194 ANKRD36BQ8N2N9 1353 aa22.27■■□□□ 1.16
TRIM27-201ENST00000377194 SHPRHQ149N8 1683 aa22.26■■□□□ 1.15
TRIM27-201ENST00000377194 WWC1Q8IX03 1113 aa22.25■■□□□ 1.15
TRIM27-201ENST00000377194 E9PSI1 815 aa22.25■■□□□ 1.15
TRIM27-201ENST00000377194 NKTRP30414 1462 aaKnown RBP22.24■■□□□ 1.15
TRIM27-201ENST00000377194 SRPK2P78362 688 aaKnown RBP22.24■■□□□ 1.15
TRIM27-201ENST00000377194 PRAM1Q96QH2 718 aa22.24■■□□□ 1.15
TRIM27-201ENST00000377194 USP32Q8NFA0 1604 aa22.24■■□□□ 1.15
TRIM27-201ENST00000377194 BCAR3O75815 825 aa22.24■■□□□ 1.15
TRIM27-201ENST00000377194 NEUROD2Q15784 382 aa22.24■■□□□ 1.15
TRIM27-201ENST00000377194 MINK1Q8N4C8 1332 aaPredicted RBP22.23■■□□□ 1.15
TRIM27-201ENST00000377194 RRP7AQ9Y3A4 280 aaKnown RBP22.23■■□□□ 1.15
TRIM27-201ENST00000377194 PTPRMP28827 1452 aa22.23■■□□□ 1.15
TRIM27-201ENST00000377194 A0A1W2PP64 1363 aa22.21■■□□□ 1.15
TRIM27-201ENST00000377194 NGEFQ8N5V2 710 aa22.21■■□□□ 1.15
TRIM27-201ENST00000377194 YTHDC2Q9H6S0 1430 aaKnown RBP22.21■■□□□ 1.15
TRIM27-201ENST00000377194 STAG3Q9UJ98 1225 aa22.21■■□□□ 1.15
TRIM27-201ENST00000377194 TCP11L2Q8N4U5 519 aa22.2■■□□□ 1.14
TRIM27-201ENST00000377194 RUNDC1Q96C34 613 aa22.2■■□□□ 1.14
TRIM27-201ENST00000377194 MLECQ14165 292 aa22.19■■□□□ 1.14
TRIM27-201ENST00000377194 POGKQ9P215 609 aa22.19■■□□□ 1.14
TRIM27-201ENST00000377194 DDRGK1Q96HY6 314 aa22.19■■□□□ 1.14
TRIM27-201ENST00000377194 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.18■■□□□ 1.14
TRIM27-201ENST00000377194 KDM2BQ8NHM5 1336 aa22.18■■□□□ 1.14
TRIM27-201ENST00000377194 GGNBP2Q9H3C7 697 aa22.17■■□□□ 1.14
TRIM27-201ENST00000377194 NSD2O96028 1365 aa22.16■■□□□ 1.14
TRIM27-201ENST00000377194 ALKQ9UM73 1620 aa22.16■■□□□ 1.14
TRIM27-201ENST00000377194 ABCC11Q96J66 1382 aa22.16■■□□□ 1.14
TRIM27-201ENST00000377194 CFAP53Q96M91 514 aa22.16■■□□□ 1.14
TRIM27-201ENST00000377194 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
TRIM27-201ENST00000377194 IQSEC2Q5JU85 1478 aa22.14■■□□□ 1.14
TRIM27-201ENST00000377194 AGLP35573 1532 aa22.14■■□□□ 1.13
TRIM27-201ENST00000377194 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
TRIM27-201ENST00000377194 CD163L1Q9NR16 1453 aa22.13■■□□□ 1.13
TRIM27-201ENST00000377194 CLTCQ00610 1675 aaKnown RBP22.13■■□□□ 1.13
TRIM27-201ENST00000377194 FYB1O15117 783 aa22.13■■□□□ 1.13
TRIM27-201ENST00000377194 REREQ9P2R6 1566 aa22.13■■□□□ 1.13
TRIM27-201ENST00000377194 U2AF1L5P0DN76 240 aaPredicted RBP22.13■■□□□ 1.13
TRIM27-201ENST00000377194 U2AF1Q01081 240 aaKnown RBP eCLIP22.13■■□□□ 1.131e-10■■■■□ 24.2
TRIM27-201ENST00000377194 CDK19Q9BWU1 502 aa22.13■■□□□ 1.13
TRIM27-201ENST00000377194 DAXXQ9UER7 740 aaPredicted RBP22.13■■□□□ 1.13
TRIM27-201ENST00000377194 NINLQ9Y2I6 1382 aa22.13■■□□□ 1.13
TRIM27-201ENST00000377194 A2ML1A8K2U0 1454 aa22.12■■□□□ 1.13
TRIM27-201ENST00000377194 ATAD2Q6PL18 1390 aa22.12■■□□□ 1.13
TRIM27-201ENST00000377194 WAPLQ7Z5K2 1190 aa22.11■■□□□ 1.13
TRIM27-201ENST00000377194 TERF2IPQ9NYB0 399 aa22.1■■□□□ 1.13
TRIM27-201ENST00000377194 FRAT2O75474 233 aaPredicted RBP22.1■■□□□ 1.13
TRIM27-201ENST00000377194 CABP1Q9NZU7 370 aa22.1■■□□□ 1.13
TRIM27-201ENST00000377194 CENPQQ7L2Z9 268 aaPredicted RBP22.09■■□□□ 1.13
TRIM27-201ENST00000377194 ARHGEF40Q8TER5 1519 aa22.08■■□□□ 1.13
TRIM27-201ENST00000377194 SPATA31D1Q6ZQQ2 1576 aa22.07■■□□□ 1.12
TRIM27-201ENST00000377194 WDR63Q8IWG1 891 aa22.07■■□□□ 1.12
TRIM27-201ENST00000377194 NLRP1Q9C000 1473 aa22.07■■□□□ 1.12
TRIM27-201ENST00000377194 RIMS2Q9UQ26 1411 aa22.07■■□□□ 1.12
TRIM27-201ENST00000377194 CCDC27Q2M243 656 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms