RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 TOM1O60784 492 aa23.9■■□□□ 1.42
HLA-F-218ENST00000376861 PLEKHH1Q9ULM0 1364 aa23.89■■□□□ 1.42
HLA-F-218ENST00000376861 CADPS2Q86UW7 1296 aa23.89■■□□□ 1.41
HLA-F-218ENST00000376861 CENPJQ9HC77 1338 aaPredicted RBP23.89■■□□□ 1.41
HLA-F-218ENST00000376861 ADGRL3Q9HAR2 1447 aa23.89■■□□□ 1.41
HLA-F-218ENST00000376861 UBAP1LF5GYI3 381 aa23.88■■□□□ 1.41
HLA-F-218ENST00000376861 NALCNQ8IZF0 1738 aa23.87■■□□□ 1.41
HLA-F-218ENST00000376861 MINK1Q8N4C8 1332 aaPredicted RBP23.86■■□□□ 1.41
HLA-F-218ENST00000376861 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.86■■□□□ 1.41
HLA-F-218ENST00000376861 SCAF1Q9H7N4 1312 aaKnown RBP23.85■■□□□ 1.41
HLA-F-218ENST00000376861 HIRIP3Q9BW71 556 aaPredicted RBP23.84■■□□□ 1.41
HLA-F-218ENST00000376861 DCCP43146 1447 aa23.83■■□□□ 1.4
HLA-F-218ENST00000376861 QRICH2Q9H0J4 1663 aa23.82■■□□□ 1.4
HLA-F-218ENST00000376861 USP47Q96K76 1375 aa23.82■■□□□ 1.4
HLA-F-218ENST00000376861 PIP4K2BP78356 416 aa23.79■■□□□ 1.4
HLA-F-218ENST00000376861 EIF4G2P78344 907 aaKnown RBP eCLIP23.79■■□□□ 1.4
HLA-F-218ENST00000376861 ST20-MTHFSA0A0A6YYL1 179 aa23.78■■□□□ 1.4
HLA-F-218ENST00000376861 SLAIN2Q9P270 581 aa23.78■■□□□ 1.4
HLA-F-218ENST00000376861 CDC42BPGQ6DT37 1551 aa23.78■■□□□ 1.4
HLA-F-218ENST00000376861 NUTM2FA1L443 756 aa23.77■■□□□ 1.4
HLA-F-218ENST00000376861 SLC24A1O60721 1099 aa23.77■■□□□ 1.4
HLA-F-218ENST00000376861 WASLO00401 505 aaPredicted RBP23.75■■□□□ 1.39
HLA-F-218ENST00000376861 ADGRB2O60241 1585 aa23.75■■□□□ 1.39
HLA-F-218ENST00000376861 EVC2Q86UK5 1308 aa23.75■■□□□ 1.39
HLA-F-218ENST00000376861 SRPK2P78362 688 aaKnown RBP23.74■■□□□ 1.39
HLA-F-218ENST00000376861 CDK19Q9BWU1 502 aa23.73■■□□□ 1.39
HLA-F-218ENST00000376861 FMN2Q9NZ56 1722 aa23.71■■□□□ 1.39
HLA-F-218ENST00000376861 FBXO41Q8TF61 875 aa23.71■■□□□ 1.39
HLA-F-218ENST00000376861 ESCO1Q5FWF5 840 aa23.7■■□□□ 1.38
HLA-F-218ENST00000376861 MST1RQ04912 1400 aa23.7■■□□□ 1.38
HLA-F-218ENST00000376861 SBNO2Q9Y2G9 1366 aa23.69■■□□□ 1.38
HLA-F-218ENST00000376861 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
HLA-F-218ENST00000376861 HSPA5P11021 654 aaKnown RBP23.69■■□□□ 1.38
HLA-F-218ENST00000376861 TMF1P82094 1093 aa23.69■■□□□ 1.38
HLA-F-218ENST00000376861 C1orf167Q5SNV9 1468 aa23.68■■□□□ 1.38
HLA-F-218ENST00000376861 TULP4Q9NRJ4 1543 aa23.66■■□□□ 1.38
HLA-F-218ENST00000376861 CABP2Q9NPB3 220 aa23.66■■□□□ 1.38
HLA-F-218ENST00000376861 ANKARQ7Z5J8 1434 aa23.65■■□□□ 1.38
HLA-F-218ENST00000376861 ROBO1Q9Y6N7 1651 aa23.65■■□□□ 1.38
HLA-F-218ENST00000376861 CDCA8Q53HL2 280 aa23.64■■□□□ 1.38
HLA-F-218ENST00000376861 NUDT16Q96DE0 195 aaKnown RBP23.64■■□□□ 1.38
HLA-F-218ENST00000376861 RGPD8O14715 1765 aaPredicted RBP23.64■■□□□ 1.38
HLA-F-218ENST00000376861 ORAI2Q96SN7 254 aa23.64■■□□□ 1.37
HLA-F-218ENST00000376861 BRINP3Q76B58 766 aa23.63■■□□□ 1.37
HLA-F-218ENST00000376861 TESK2Q96S53 571 aa23.63■■□□□ 1.37
HLA-F-218ENST00000376861 CCDC61Q9Y6R9 512 aa23.62■■□□□ 1.37
HLA-F-218ENST00000376861 ITSN1Q15811 1721 aa23.62■■□□□ 1.37
HLA-F-218ENST00000376861 PHF8Q9UPP1 1060 aa23.61■■□□□ 1.37
HLA-F-218ENST00000376861 ATAD2Q6PL18 1390 aa23.6■■□□□ 1.37
HLA-F-218ENST00000376861 NGDNQ8NEJ9 315 aaKnown RBP23.59■■□□□ 1.37
HLA-F-218ENST00000376861 PMFBP1Q8TBY8 1022 aa23.59■■□□□ 1.37
HLA-F-218ENST00000376861 POLR3GLQ9BT43 218 aa23.59■■□□□ 1.37
HLA-F-218ENST00000376861 PRR36Q9H6K5 1346 aa23.58■■□□□ 1.37
HLA-F-218ENST00000376861 KIF1AQ12756 1690 aa23.58■■□□□ 1.37
HLA-F-218ENST00000376861 USP32Q8NFA0 1604 aa23.58■■□□□ 1.36
HLA-F-218ENST00000376861 ATP7BP35670 1465 aa23.57■■□□□ 1.36
HLA-F-218ENST00000376861 TMC1Q8TDI8 760 aa23.57■■□□□ 1.36
HLA-F-218ENST00000376861 FOXO3O43524 673 aa23.56■■□□□ 1.36
HLA-F-218ENST00000376861 PPIP5K1Q6PFW1 1433 aa23.56■■□□□ 1.36
HLA-F-218ENST00000376861 NPHP3Q7Z494 1330 aa23.56■■□□□ 1.36
HLA-F-218ENST00000376861 PSME1Q06323 249 aa23.55■■□□□ 1.36
HLA-F-218ENST00000376861 PUS7Q96PZ0 661 aaKnown RBP23.55■■□□□ 1.36
HLA-F-218ENST00000376861 DISP3Q9P2K9 1392 aa23.54■■□□□ 1.36
HLA-F-218ENST00000376861 CABP1Q9NZU7 370 aa23.54■■□□□ 1.36
HLA-F-218ENST00000376861 PHLPP1O60346 1717 aa23.53■■□□□ 1.36
HLA-F-218ENST00000376861 DDX17Q92841 729 aaKnown RBP23.51■■□□□ 1.35
HLA-F-218ENST00000376861 TOPAZ1Q8N9V7 1692 aa23.51■■□□□ 1.35
HLA-F-218ENST00000376861 HSPA1LP34931 641 aa23.5■■□□□ 1.35
HLA-F-218ENST00000376861 PLEKHG3A1L390 1219 aa23.49■■□□□ 1.35
HLA-F-218ENST00000376861 ACEP12821 1306 aa23.49■■□□□ 1.35
HLA-F-218ENST00000376861 NHSL1Q5SYE7 1610 aa23.49■■□□□ 1.35
HLA-F-218ENST00000376861 XPCQ01831 940 aaPredicted RBP23.49■■□□□ 1.35
HLA-F-218ENST00000376861 AHDC1Q5TGY3 1603 aaPredicted RBP23.48■■□□□ 1.35
HLA-F-218ENST00000376861 KRT28Q7Z3Y7 464 aa23.48■■□□□ 1.35
HLA-F-218ENST00000376861 HDGFL2Q7Z4V5 671 aaPredicted RBP23.47■■□□□ 1.35
HLA-F-218ENST00000376861 ILDR1Q86SU0 546 aaPredicted RBP23.47■■□□□ 1.35
HLA-F-218ENST00000376861 TERF2IPQ9NYB0 399 aa23.47■■□□□ 1.35
HLA-F-218ENST00000376861 NINLQ9Y2I6 1382 aa23.47■■□□□ 1.35
HLA-F-218ENST00000376861 LRRC59Q96AG4 307 aaKnown RBP23.46■■□□□ 1.35
HLA-F-218ENST00000376861 PAK3O75914 559 aaPredicted RBP23.45■■□□□ 1.34
HLA-F-218ENST00000376861 ZNF692Q9BU19 519 aaPredicted RBP23.45■■□□□ 1.34
HLA-F-218ENST00000376861 SLC12A5Q9H2X9 1139 aa23.45■■□□□ 1.34
HLA-F-218ENST00000376861 POLR3AO14802 1390 aaPredicted RBP23.44■■□□□ 1.34
HLA-F-218ENST00000376861 LMOD2Q6P5Q4 547 aa23.43■■□□□ 1.34
HLA-F-218ENST00000376861 SOS2Q07890 1332 aaPredicted RBP23.43■■□□□ 1.34
HLA-F-218ENST00000376861 COL16A1Q07092 1604 aaPredicted RBP23.4■■□□□ 1.34
HLA-F-218ENST00000376861 KTN1Q86UP2 1357 aaKnown RBP23.4■■□□□ 1.34
HLA-F-218ENST00000376861 PXDNQ92626 1479 aa23.39■■□□□ 1.34
HLA-F-218ENST00000376861 KIF7Q2M1P5 1343 aa23.39■■□□□ 1.33
HLA-F-218ENST00000376861 C11orf95C9JLR9 678 aaPredicted RBP23.38■■□□□ 1.33
HLA-F-218ENST00000376861 AKAP12Q02952 1782 aa23.37■■□□□ 1.33
HLA-F-218ENST00000376861 SBNO1A3KN83 1393 aa23.37■■□□□ 1.33
HLA-F-218ENST00000376861 JCADQ9P266 1359 aa23.37■■□□□ 1.33
HLA-F-218ENST00000376861 CCDC7Q96M83 1385 aa23.36■■□□□ 1.33
HLA-F-218ENST00000376861 USP6P35125 1406 aa23.35■■□□□ 1.33
HLA-F-218ENST00000376861 BRD4O60885 1362 aaPredicted RBP23.35■■□□□ 1.33
HLA-F-218ENST00000376861 ANKRD36BQ8N2N9 1353 aa23.35■■□□□ 1.33
HLA-F-218ENST00000376861 SPATA31A3Q5VYP0 1347 aa23.35■■□□□ 1.33
HLA-F-218ENST00000376861 WASHC2AQ641Q2 1341 aa23.35■■□□□ 1.33
HLA-F-218ENST00000376861 TNS3Q68CZ2 1445 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms