RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 SMC4Q9NTJ3 1288 aa20.08■□□□□ 0.81
SSH3-203ENST00000376757 CABP2Q9NPB3 220 aa20.08■□□□□ 0.8
SSH3-203ENST00000376757 KDM5AP29375 1690 aaKnown RBP20.07■□□□□ 0.8
SSH3-203ENST00000376757 NLRP1Q9C000 1473 aa20.07■□□□□ 0.8
SSH3-203ENST00000376757 FOXD4L1Q9NU39 408 aa20.07■□□□□ 0.8
SSH3-203ENST00000376757 STK26Q9P289 416 aa20.07■□□□□ 0.8
SSH3-203ENST00000376757 KANK1Q14678 1352 aa20.07■□□□□ 0.8
SSH3-203ENST00000376757 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
SSH3-203ENST00000376757 RWDD1Q9H446 243 aaPredicted RBP20.07■□□□□ 0.8
SSH3-203ENST00000376757 CLASP1Q7Z460 1538 aa20.06■□□□□ 0.8
SSH3-203ENST00000376757 NPC1L1Q9UHC9 1359 aa20.06■□□□□ 0.8
SSH3-203ENST00000376757 TRPM2O94759 1503 aa20.06■□□□□ 0.8
SSH3-203ENST00000376757 NOS1P29475 1434 aa20.05■□□□□ 0.8
SSH3-203ENST00000376757 SPHKAPQ2M3C7 1700 aa20.05■□□□□ 0.8
SSH3-203ENST00000376757 GGNBP2Q9H3C7 697 aa20.04■□□□□ 0.8
SSH3-203ENST00000376757 POLR3AO14802 1390 aaPredicted RBP20.04■□□□□ 0.8
SSH3-203ENST00000376757 FBLN1P23142 703 aa20.04■□□□□ 0.8
SSH3-203ENST00000376757 MVPQ14764 893 aaKnown RBP20.04■□□□□ 0.8
SSH3-203ENST00000376757 DZIP1LQ8IYY4 767 aaKnown RBP20.04■□□□□ 0.8
SSH3-203ENST00000376757 C22orf23Q9BZE7 217 aa20.04■□□□□ 0.8
SSH3-203ENST00000376757 CEP152O94986 1710 aa20.03■□□□□ 0.8
SSH3-203ENST00000376757 PTPRTO14522 1441 aa20.02■□□□□ 0.8
SSH3-203ENST00000376757 ABCC1P33527 1531 aa20.02■□□□□ 0.8
SSH3-203ENST00000376757 ZKSCAN2Q63HK3 967 aa20.02■□□□□ 0.8
SSH3-203ENST00000376757 XRCC6P12956 609 aaKnown RBP eCLIP20.01■□□□□ 0.79
SSH3-203ENST00000376757 TRIM27P14373 513 aa20.01■□□□□ 0.79
SSH3-203ENST00000376757 FAM43AQ8N2R8 423 aa20.01■□□□□ 0.79
SSH3-203ENST00000376757 SSH1Q8WYL5 1049 aa20.01■□□□□ 0.79
SSH3-203ENST00000376757 CFAP53Q96M91 514 aa20.01■□□□□ 0.79
SSH3-203ENST00000376757 CHD1O14646 1710 aa20.01■□□□□ 0.79
SSH3-203ENST00000376757 LNPKQ9C0E8 428 aa20.01■□□□□ 0.79
SSH3-203ENST00000376757 NOB1Q9ULX3 412 aaKnown RBP19.99■□□□□ 0.79
SSH3-203ENST00000376757 ABCA6Q8N139 1617 aa19.99■□□□□ 0.79
SSH3-203ENST00000376757 MCM4P33991 863 aa19.99■□□□□ 0.79
SSH3-203ENST00000376757 MYH16Q9H6N6 1097 aa19.99■□□□□ 0.79
SSH3-203ENST00000376757 C1orf115Q9H7X2 142 aa19.98■□□□□ 0.79
SSH3-203ENST00000376757 WDR63Q8IWG1 891 aa19.98■□□□□ 0.79
SSH3-203ENST00000376757 GOLGA6L3A6NEY3 463 aa19.97■□□□□ 0.79
SSH3-203ENST00000376757 TMEM57Q8N5G2 664 aa19.97■□□□□ 0.79
SSH3-203ENST00000376757 ELL2O00472 640 aaPredicted RBP19.97■□□□□ 0.79
SSH3-203ENST00000376757 ZFYVE16Q7Z3T8 1539 aa19.96■□□□□ 0.79
SSH3-203ENST00000376757 SRPK2P78362 688 aaKnown RBP19.95■□□□□ 0.78
SSH3-203ENST00000376757 TRAK2O60296 914 aa19.95■□□□□ 0.78
SSH3-203ENST00000376757 PHF23Q9BUL5 403 aaPredicted RBP19.95■□□□□ 0.78
SSH3-203ENST00000376757 ZCCHC11Q5TAX3 1644 aaKnown RBP19.94■□□□□ 0.78
SSH3-203ENST00000376757 NINLQ9Y2I6 1382 aa19.93■□□□□ 0.78
SSH3-203ENST00000376757 THUMPD2Q9BTF0 503 aaKnown RBP19.93■□□□□ 0.78
SSH3-203ENST00000376757 VIRMAQ69YN4 1812 aaKnown RBP19.93■□□□□ 0.78
SSH3-203ENST00000376757 STAC3Q96MF2 364 aa19.93■□□□□ 0.78
SSH3-203ENST00000376757 NGEFQ8N5V2 710 aa19.92■□□□□ 0.78
SSH3-203ENST00000376757 NAP1L5Q96NT1 182 aaPredicted RBP19.92■□□□□ 0.78
SSH3-203ENST00000376757 MAP3K4Q9Y6R4 1608 aa19.92■□□□□ 0.78
SSH3-203ENST00000376757 L1TD1Q5T7N2 865 aaKnown RBP19.92■□□□□ 0.78
SSH3-203ENST00000376757 TMPOP42166 694 aaKnown RBP19.92■□□□□ 0.78
SSH3-203ENST00000376757 RIPK4P57078 832 aa19.92■□□□□ 0.78
SSH3-203ENST00000376757 FANCAO15360 1455 aa19.91■□□□□ 0.78
SSH3-203ENST00000376757 SHPRHQ149N8 1683 aa19.91■□□□□ 0.78
SSH3-203ENST00000376757 HSCBQ8IWL3 235 aa19.91■□□□□ 0.78
SSH3-203ENST00000376757 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
SSH3-203ENST00000376757 MINK1Q8N4C8 1332 aaPredicted RBP19.91■□□□□ 0.78
SSH3-203ENST00000376757 ATF7IPQ6VMQ6 1270 aa19.9■□□□□ 0.78
SSH3-203ENST00000376757 RBM42Q9BTD8 480 aaKnown RBP19.89■□□□□ 0.78
SSH3-203ENST00000376757 C14orf93Q9H972 538 aaKnown RBP19.89■□□□□ 0.77
SSH3-203ENST00000376757 CHMP5Q9NZZ3 219 aa19.89■□□□□ 0.77
SSH3-203ENST00000376757 IQSEC2Q5JU85 1478 aa19.89■□□□□ 0.77
SSH3-203ENST00000376757 ATP7AQ04656 1500 aa19.88■□□□□ 0.77
SSH3-203ENST00000376757 ZNF518AQ6AHZ1 1483 aa19.88■□□□□ 0.77
SSH3-203ENST00000376757 RSPH6AQ9H0K4 717 aa19.88■□□□□ 0.77
SSH3-203ENST00000376757 MROH2AA6NES4 1674 aa19.88■□□□□ 0.77
SSH3-203ENST00000376757 HSP90AA1P07900 732 aaKnown RBP19.87■□□□□ 0.77
SSH3-203ENST00000376757 ADGRL1O94910 1474 aa19.87■□□□□ 0.77
SSH3-203ENST00000376757 TET3O43151 1660 aa19.87■□□□□ 0.77
SSH3-203ENST00000376757 CD2BP2O95400 341 aaKnown RBP19.87■□□□□ 0.77
SSH3-203ENST00000376757 ANKRD45Q5TZF3 282 aa19.86■□□□□ 0.77
SSH3-203ENST00000376757 SLC24A1O60721 1099 aa19.86■□□□□ 0.77
SSH3-203ENST00000376757 HMOX1P09601 288 aa19.86■□□□□ 0.77
SSH3-203ENST00000376757 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.86■□□□□ 0.77
SSH3-203ENST00000376757 DDX19BQ9UMR2 479 aa19.86■□□□□ 0.77
SSH3-203ENST00000376757 CD109Q6YHK3 1445 aa19.86■□□□□ 0.77
SSH3-203ENST00000376757 HSP90AB1P08238 724 aaKnown RBP19.85■□□□□ 0.77
SSH3-203ENST00000376757 EVC2Q86UK5 1308 aa19.85■□□□□ 0.77
SSH3-203ENST00000376757 RTEL1-TNFRSF6BF6WH68 1400 aa19.84■□□□□ 0.77
SSH3-203ENST00000376757 CCDC27Q2M243 656 aa19.84■□□□□ 0.77
SSH3-203ENST00000376757 PLEKHF1Q96S99 279 aa19.83■□□□□ 0.76
SSH3-203ENST00000376757 TNPO1Q92973 898 aaKnown RBP19.82■□□□□ 0.76
SSH3-203ENST00000376757 PNNQ9H307 717 aaKnown RBP19.82■□□□□ 0.76
SSH3-203ENST00000376757 ZBTB40Q9NUA8 1239 aa19.82■□□□□ 0.76
SSH3-203ENST00000376757 SHROOM2Q13796 1616 aa19.82■□□□□ 0.76
SSH3-203ENST00000376757 MYOM2P54296 1465 aa19.82■□□□□ 0.76
SSH3-203ENST00000376757 KIF1BO60333 1816 aa19.82■□□□□ 0.76
SSH3-203ENST00000376757 FSD2A1L4K1 749 aa19.81■□□□□ 0.76
SSH3-203ENST00000376757 A0A1W2PP64 1363 aa19.81■□□□□ 0.76
SSH3-203ENST00000376757 APBB1O00213 710 aa19.81■□□□□ 0.76
SSH3-203ENST00000376757 GAS2L3Q86XJ1 694 aa19.81■□□□□ 0.76
SSH3-203ENST00000376757 HDAC1Q13547 482 aaPredicted RBP19.8■□□□□ 0.76
SSH3-203ENST00000376757 TSPYL6Q8N831 410 aa19.8■□□□□ 0.76
SSH3-203ENST00000376757 FYB1O15117 783 aa19.8■□□□□ 0.76
SSH3-203ENST00000376757 SMC5Q8IY18 1101 aa19.8■□□□□ 0.76
SSH3-203ENST00000376757 ZNF692Q9BU19 519 aaPredicted RBP19.8■□□□□ 0.76
SSH3-203ENST00000376757 ATAD2Q6PL18 1390 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms