RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.36
ZNF550-203ENST00000376230 PLA2R1Q13018 1463 aa12.77□□□□□ -0.36
ZNF550-203ENST00000376230 ARHGEF12Q9NZN5 1544 aa12.77□□□□□ -0.36
ZNF550-203ENST00000376230 NME9Q86XW9 330 aa12.77□□□□□ -0.37
ZNF550-203ENST00000376230 PARD3Q8TEW0 1356 aa12.77□□□□□ -0.37
ZNF550-203ENST00000376230 ANKRD45Q5TZF3 282 aa12.76□□□□□ -0.37
ZNF550-203ENST00000376230 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
ZNF550-203ENST00000376230 FAM83GA6ND36 823 aa12.75□□□□□ -0.37
ZNF550-203ENST00000376230 NOL8Q76FK4 1167 aaKnown RBP12.75□□□□□ -0.37
ZNF550-203ENST00000376230 DZIP1LQ8IYY4 767 aaKnown RBP12.75□□□□□ -0.37
ZNF550-203ENST00000376230 RWDD1Q9H446 243 aaPredicted RBP12.75□□□□□ -0.37
ZNF550-203ENST00000376230 TAOK2Q9UL54 1235 aa12.75□□□□□ -0.37
ZNF550-203ENST00000376230 RLBP1P12271 317 aa12.74□□□□□ -0.37
ZNF550-203ENST00000376230 NOB1Q9ULX3 412 aaKnown RBP12.74□□□□□ -0.37
ZNF550-203ENST00000376230 COG3Q96JB2 828 aa12.74□□□□□ -0.37
ZNF550-203ENST00000376230 GCC2Q8IWJ2 1684 aa12.74□□□□□ -0.37
ZNF550-203ENST00000376230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.74□□□□□ -0.37
ZNF550-203ENST00000376230 XPCQ01831 940 aaPredicted RBP12.74□□□□□ -0.37
ZNF550-203ENST00000376230 AMPHP49418 695 aa12.73□□□□□ -0.37
ZNF550-203ENST00000376230 PDZRN3Q9UPQ7 1066 aa12.73□□□□□ -0.37
ZNF550-203ENST00000376230 BCORL1Q5H9F3 1711 aa12.73□□□□□ -0.37
ZNF550-203ENST00000376230 ADGRL2O95490 1459 aa12.73□□□□□ -0.37
ZNF550-203ENST00000376230 ITSN2Q9NZM3 1697 aa12.72□□□□□ -0.37
ZNF550-203ENST00000376230 NCLP19338 710 aaKnown RBP12.72□□□□□ -0.37
ZNF550-203ENST00000376230 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
ZNF550-203ENST00000376230 FOXD4L4Q8WXT5 416 aaPredicted RBP12.72□□□□□ -0.37
ZNF550-203ENST00000376230 BECN1Q14457 450 aa12.72□□□□□ -0.37
ZNF550-203ENST00000376230 C14orf93Q9H972 538 aaKnown RBP12.72□□□□□ -0.37
ZNF550-203ENST00000376230 TTC37Q6PGP7 1564 aa12.72□□□□□ -0.37
ZNF550-203ENST00000376230 SAMD9LQ8IVG5 1584 aa12.72□□□□□ -0.37
ZNF550-203ENST00000376230 SSH1Q8WYL5 1049 aa12.71□□□□□ -0.37
ZNF550-203ENST00000376230 SCAF11Q99590 1463 aaKnown RBP12.7□□□□□ -0.38
ZNF550-203ENST00000376230 TMPOP42166 694 aaKnown RBP12.7□□□□□ -0.38
ZNF550-203ENST00000376230 RARSP54136 660 aaKnown RBP12.7□□□□□ -0.38
ZNF550-203ENST00000376230 SULT6B1Q6IMI4 303 aa12.7□□□□□ -0.38
ZNF550-203ENST00000376230 MAGI2Q86UL8 1455 aa12.7□□□□□ -0.38
ZNF550-203ENST00000376230 RTF1Q92541 710 aaKnown RBP12.7□□□□□ -0.38
ZNF550-203ENST00000376230 ABCA8O94911 1581 aa12.7□□□□□ -0.38
ZNF550-203ENST00000376230 PCDHB15Q9Y5E8 787 aa12.7□□□□□ -0.38
ZNF550-203ENST00000376230 KRT24Q2M2I5 525 aa12.69□□□□□ -0.38
ZNF550-203ENST00000376230 FOXD4L6Q3SYB3 417 aaPredicted RBP12.69□□□□□ -0.38
ZNF550-203ENST00000376230 FOXD4L3Q6VB84 417 aaPredicted RBP12.69□□□□□ -0.38
ZNF550-203ENST00000376230 NAP1L5Q96NT1 182 aaPredicted RBP12.69□□□□□ -0.38
ZNF550-203ENST00000376230 MCM10Q7L590 875 aa12.69□□□□□ -0.38
ZNF550-203ENST00000376230 FYB1O15117 783 aa12.69□□□□□ -0.38
ZNF550-203ENST00000376230 SEC24BO95487 1268 aa12.69□□□□□ -0.38
ZNF550-203ENST00000376230 EIF2S2P20042 333 aaKnown RBP12.69□□□□□ -0.38
ZNF550-203ENST00000376230 UHRF1BP1Q6BDS2 1440 aa12.68□□□□□ -0.38
ZNF550-203ENST00000376230 LRPPRCP42704 1394 aaKnown RBP12.68□□□□□ -0.38
ZNF550-203ENST00000376230 TMEM57Q8N5G2 664 aa12.68□□□□□ -0.38
ZNF550-203ENST00000376230 ABCC2Q92887 1545 aa12.67□□□□□ -0.38
ZNF550-203ENST00000376230 IPO8O15397 1037 aaKnown RBP12.67□□□□□ -0.38
ZNF550-203ENST00000376230 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
ZNF550-203ENST00000376230 C8orf34Q49A92 452 aa12.66□□□□□ -0.38
ZNF550-203ENST00000376230 NGEFQ8N5V2 710 aa12.66□□□□□ -0.38
ZNF550-203ENST00000376230 CCDC9Q9Y3X0 531 aaKnown RBP12.66□□□□□ -0.38
ZNF550-203ENST00000376230 WDR7Q9Y4E6 1490 aa12.66□□□□□ -0.38
ZNF550-203ENST00000376230 DUOX2Q9NRD8 1548 aa12.66□□□□□ -0.38
ZNF550-203ENST00000376230 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
ZNF550-203ENST00000376230 NLRP6P59044 892 aa12.65□□□□□ -0.38
ZNF550-203ENST00000376230 USHBP1Q8N6Y0 703 aa12.65□□□□□ -0.38
ZNF550-203ENST00000376230 SLC52A1Q9NWF4 448 aa12.65□□□□□ -0.38
ZNF550-203ENST00000376230 AEBP1Q8IUX7 1158 aa12.65□□□□□ -0.38
ZNF550-203ENST00000376230 NUDT16Q96DE0 195 aaKnown RBP12.65□□□□□ -0.38
ZNF550-203ENST00000376230 EID1Q9Y6B2 187 aa12.65□□□□□ -0.38
ZNF550-203ENST00000376230 COL17A1Q9UMD9 1497 aaPredicted RBP12.65□□□□□ -0.38
ZNF550-203ENST00000376230 ZNF330Q9Y3S2 320 aaPredicted RBP12.64□□□□□ -0.39
ZNF550-203ENST00000376230 SHANK2Q9UPX8 1470 aa12.64□□□□□ -0.39
ZNF550-203ENST00000376230 TRIM27P14373 513 aa12.63□□□□□ -0.39
ZNF550-203ENST00000376230 TSPYL6Q8N831 410 aa12.63□□□□□ -0.39
ZNF550-203ENST00000376230 HDGFP51858 240 aaKnown RBP12.63□□□□□ -0.39
ZNF550-203ENST00000376230 KDM5CP41229 1560 aa12.63□□□□□ -0.39
ZNF550-203ENST00000376230 CDC42BPAQ5VT25 1732 aa12.63□□□□□ -0.39
ZNF550-203ENST00000376230 STAC3Q96MF2 364 aa12.63□□□□□ -0.39
ZNF550-203ENST00000376230 GPRASP1Q5JY77 1395 aa12.63□□□□□ -0.39
ZNF550-203ENST00000376230 PNNQ9H307 717 aaKnown RBP12.62□□□□□ -0.39
ZNF550-203ENST00000376230 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
ZNF550-203ENST00000376230 OS9Q13438 667 aaPredicted RBP12.61□□□□□ -0.39
ZNF550-203ENST00000376230 TWISTNBQ3B726 338 aaPredicted RBP12.61□□□□□ -0.39
ZNF550-203ENST00000376230 HSCBQ8IWL3 235 aa12.61□□□□□ -0.39
ZNF550-203ENST00000376230 ATP10AO60312 1499 aa12.61□□□□□ -0.39
ZNF550-203ENST00000376230 F6X3S4 739 aa12.61□□□□□ -0.39
ZNF550-203ENST00000376230 HSP90AB2PQ58FF8 381 aa12.61□□□□□ -0.39
ZNF550-203ENST00000376230 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
ZNF550-203ENST00000376230 RTEL1-TNFRSF6BF6WH68 1400 aa12.61□□□□□ -0.39
ZNF550-203ENST00000376230 MVPQ14764 893 aaKnown RBP12.6□□□□□ -0.39
ZNF550-203ENST00000376230 CHD1O14646 1710 aa12.6□□□□□ -0.39
ZNF550-203ENST00000376230 TRIM6-TRIM34B2RNG4 842 aa12.6□□□□□ -0.39
ZNF550-203ENST00000376230 DDX19BQ9UMR2 479 aa12.6□□□□□ -0.39
ZNF550-203ENST00000376230 YEATS2Q9ULM3 1422 aa12.59□□□□□ -0.39
ZNF550-203ENST00000376230 PDE3AQ14432 1141 aa12.59□□□□□ -0.39
ZNF550-203ENST00000376230 FOXO3O43524 673 aa12.59□□□□□ -0.39
ZNF550-203ENST00000376230 TSPYL4Q9UJ04 414 aa12.59□□□□□ -0.39
ZNF550-203ENST00000376230 SMARCA5O60264 1052 aaPredicted RBP12.59□□□□□ -0.39
ZNF550-203ENST00000376230 ATAD2Q6PL18 1390 aa12.58□□□□□ -0.39
ZNF550-203ENST00000376230 TSHZ3Q63HK5 1081 aa12.58□□□□□ -0.4
ZNF550-203ENST00000376230 ABTB2Q8N961 1025 aa12.58□□□□□ -0.4
ZNF550-203ENST00000376230 A0A1W2PP64 1363 aa12.58□□□□□ -0.4
ZNF550-203ENST00000376230 FKBP5Q13451 457 aaPredicted RBP12.58□□□□□ -0.4
ZNF550-203ENST00000376230 RILPL2Q969X0 211 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms