RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 MLECQ14165 292 aa14.92□□□□□ -0.02
MCF2L-202ENST00000375597 ZKSCAN2Q63HK3 967 aa14.91□□□□□ -0.02
MCF2L-202ENST00000375597 TRAPPC8Q9Y2L5 1435 aa14.91□□□□□ -0.02
MCF2L-202ENST00000375597 ERCC6L2Q5T890 1561 aa14.91□□□□□ -0.02
MCF2L-202ENST00000375597 USP19O94966 1318 aa14.91□□□□□ -0.02
MCF2L-202ENST00000375597 RIPK4P57078 832 aa14.91□□□□□ -0.02
MCF2L-202ENST00000375597 SSH1Q8WYL5 1049 aa14.9□□□□□ -0.02
MCF2L-202ENST00000375597 RBM42Q9BTD8 480 aaKnown RBP14.9□□□□□ -0.02
MCF2L-202ENST00000375597 ZNF521Q96K83 1311 aa14.89□□□□□ -0.03
MCF2L-202ENST00000375597 TMEM57Q8N5G2 664 aa14.89□□□□□ -0.03
MCF2L-202ENST00000375597 ZMYM4Q5VZL5 1548 aa14.89□□□□□ -0.03
MCF2L-202ENST00000375597 CFAP65Q6ZU64 1925 aaKnown RBP14.88□□□□□ -0.03
MCF2L-202ENST00000375597 MYH16Q9H6N6 1097 aa14.88□□□□□ -0.03
MCF2L-202ENST00000375597 TRIM27P14373 513 aa14.88□□□□□ -0.03
MCF2L-202ENST00000375597 PDE3AQ14432 1141 aa14.88□□□□□ -0.03
MCF2L-202ENST00000375597 MPNDQ8N594 471 aa14.88□□□□□ -0.03
MCF2L-202ENST00000375597 KANK1Q14678 1352 aa14.87□□□□□ -0.03
MCF2L-202ENST00000375597 PREX2Q70Z35 1606 aa14.87□□□□□ -0.03
MCF2L-202ENST00000375597 TRAK2O60296 914 aa14.87□□□□□ -0.03
MCF2L-202ENST00000375597 EIF3AQ14152 1382 aaKnown RBP14.87□□□□□ -0.03
MCF2L-202ENST00000375597 PNNQ9H307 717 aaKnown RBP14.86□□□□□ -0.03
MCF2L-202ENST00000375597 WDR7Q9Y4E6 1490 aa14.86□□□□□ -0.03
MCF2L-202ENST00000375597 ZNF428Q96B54 188 aa14.86□□□□□ -0.03
MCF2L-202ENST00000375597 UGGT1Q9NYU2 1555 aa14.86□□□□□ -0.03
MCF2L-202ENST00000375597 TRPM1Q7Z4N2 1603 aa14.86□□□□□ -0.03
MCF2L-202ENST00000375597 TRIM44Q96DX7 344 aaPredicted RBP14.86□□□□□ -0.03
MCF2L-202ENST00000375597 SAMD9LQ8IVG5 1584 aa14.86□□□□□ -0.03
MCF2L-202ENST00000375597 CDC42BPBQ9Y5S2 1711 aa14.86□□□□□ -0.03
MCF2L-202ENST00000375597 XRCC6P12956 609 aaKnown RBP eCLIP14.85□□□□□ -0.03
MCF2L-202ENST00000375597 DCTN1Q14203 1278 aa14.85□□□□□ -0.03
MCF2L-202ENST00000375597 MVPQ14764 893 aaKnown RBP14.85□□□□□ -0.03
MCF2L-202ENST00000375597 MCM4P33991 863 aa14.84□□□□□ -0.03
MCF2L-202ENST00000375597 CHAMP1Q96JM3 812 aa14.83□□□□□ -0.03
MCF2L-202ENST00000375597 TBC1D32Q96NH3 1257 aa14.83□□□□□ -0.03
MCF2L-202ENST00000375597 DTNBO60941 627 aa14.83□□□□□ -0.04
MCF2L-202ENST00000375597 UNC13BO14795 1591 aa14.83□□□□□ -0.04
MCF2L-202ENST00000375597 GPRASP1Q5JY77 1395 aa14.83□□□□□ -0.04
MCF2L-202ENST00000375597 RAPGEF3O95398 923 aa14.83□□□□□ -0.04
MCF2L-202ENST00000375597 ATAD2Q6PL18 1390 aa14.83□□□□□ -0.04
MCF2L-202ENST00000375597 MAST1Q9Y2H9 1570 aa14.82□□□□□ -0.04
MCF2L-202ENST00000375597 NECTIN2Q92692 538 aa14.82□□□□□ -0.04
MCF2L-202ENST00000375597 LAMC1P11047 1609 aa14.82□□□□□ -0.04
MCF2L-202ENST00000375597 ASXL1Q8IXJ9 1541 aa14.81□□□□□ -0.04
MCF2L-202ENST00000375597 L1TD1Q5T7N2 865 aaKnown RBP14.81□□□□□ -0.04
MCF2L-202ENST00000375597 SCAF11Q99590 1463 aaKnown RBP14.8□□□□□ -0.04
MCF2L-202ENST00000375597 NOS1P29475 1434 aa14.8□□□□□ -0.04
MCF2L-202ENST00000375597 PRKAR2BP31323 418 aa14.8□□□□□ -0.04
MCF2L-202ENST00000375597 FAM83GA6ND36 823 aa14.79□□□□□ -0.04
MCF2L-202ENST00000375597 TMPOP42166 694 aaKnown RBP14.79□□□□□ -0.04
MCF2L-202ENST00000375597 SLC4A10Q6U841 1118 aa14.78□□□□□ -0.04
MCF2L-202ENST00000375597 ATF7IPQ6VMQ6 1270 aa14.78□□□□□ -0.04
MCF2L-202ENST00000375597 OSCARQ8IYS5 282 aa14.78□□□□□ -0.04
MCF2L-202ENST00000375597 TRMT2AQ8IZ69 625 aaKnown RBP14.78□□□□□ -0.04
MCF2L-202ENST00000375597 CHMP5Q9NZZ3 219 aa14.78□□□□□ -0.04
MCF2L-202ENST00000375597 PRAM1Q96QH2 718 aa14.78□□□□□ -0.04
MCF2L-202ENST00000375597 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
MCF2L-202ENST00000375597 NPM1P06748 294 aaKnown RBP eCLIP14.78□□□□□ -0.04
MCF2L-202ENST00000375597 KRT24Q2M2I5 525 aa14.78□□□□□ -0.04
MCF2L-202ENST00000375597 VSIG10Q8N0Z9 540 aa14.78□□□□□ -0.04
MCF2L-202ENST00000375597 TSPYL6Q8N831 410 aa14.78□□□□□ -0.04
MCF2L-202ENST00000375597 IQGAP3Q86VI3 1631 aa14.77□□□□□ -0.04
MCF2L-202ENST00000375597 MYO5CQ9NQX4 1742 aa14.77□□□□□ -0.04
MCF2L-202ENST00000375597 PLXNC1O60486 1568 aa14.77□□□□□ -0.05
MCF2L-202ENST00000375597 EIF2AK4Q9P2K8 1649 aaKnown RBP14.77□□□□□ -0.05
MCF2L-202ENST00000375597 CD2BP2O95400 341 aaKnown RBP14.77□□□□□ -0.05
MCF2L-202ENST00000375597 TSHZ3Q63HK5 1081 aa14.77□□□□□ -0.05
MCF2L-202ENST00000375597 CABP1Q9NZU7 370 aa14.77□□□□□ -0.05
MCF2L-202ENST00000375597 RRS1Q15050 365 aaKnown RBP14.76□□□□□ -0.05
MCF2L-202ENST00000375597 FAM43AQ8N2R8 423 aa14.76□□□□□ -0.05
MCF2L-202ENST00000375597 PRDM15P57071 1507 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-202ENST00000375597 SMARCA5O60264 1052 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-202ENST00000375597 MIS18AQ9NYP9 233 aa14.76□□□□□ -0.05
MCF2L-202ENST00000375597 NCKAP5LQ9HCH0 1330 aa14.76□□□□□ -0.05
MCF2L-202ENST00000375597 C16orf71Q8IYS4 520 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-202ENST00000375597 SSFA2P28290 1259 aa14.75□□□□□ -0.05
MCF2L-202ENST00000375597 WAPLQ7Z5K2 1190 aa14.75□□□□□ -0.05
MCF2L-202ENST00000375597 DDX19BQ9UMR2 479 aa14.75□□□□□ -0.05
MCF2L-202ENST00000375597 TTC37Q6PGP7 1564 aa14.75□□□□□ -0.05
MCF2L-202ENST00000375597 ABCC2Q92887 1545 aa14.75□□□□□ -0.05
MCF2L-202ENST00000375597 DIAPH1O60610 1272 aaKnown RBP14.75□□□□□ -0.05
MCF2L-202ENST00000375597 DDX49Q9Y6V7 483 aaKnown RBP14.75□□□□□ -0.05
MCF2L-202ENST00000375597 TNPO1Q92973 898 aaKnown RBP14.74□□□□□ -0.05
MCF2L-202ENST00000375597 EVC2Q86UK5 1308 aa14.74□□□□□ -0.05
MCF2L-202ENST00000375597 SHROOM2Q13796 1616 aa14.74□□□□□ -0.05
MCF2L-202ENST00000375597 MCTP1Q6DN14 999 aa14.73□□□□□ -0.05
MCF2L-202ENST00000375597 PLCB2Q00722 1185 aa14.73□□□□□ -0.05
MCF2L-202ENST00000375597 ANTXR1Q9H6X2 564 aa14.73□□□□□ -0.05
MCF2L-202ENST00000375597 EMILIN1Q9Y6C2 1016 aa14.73□□□□□ -0.05
MCF2L-202ENST00000375597 RNF214Q8ND24 703 aa14.73□□□□□ -0.05
MCF2L-202ENST00000375597 PHACTR3Q96KR7 559 aa14.73□□□□□ -0.05
MCF2L-202ENST00000375597 RSPH6AQ9H0K4 717 aa14.72□□□□□ -0.05
MCF2L-202ENST00000375597 INSRP06213 1382 aa14.72□□□□□ -0.05
MCF2L-202ENST00000375597 RBM10P98175 930 aaKnown RBP14.72□□□□□ -0.05
MCF2L-202ENST00000375597 GRPEL1Q9HAV7 217 aa14.72□□□□□ -0.05
MCF2L-202ENST00000375597 CLASP1Q7Z460 1538 aa14.72□□□□□ -0.05
MCF2L-202ENST00000375597 CHD1LQ86WJ1 897 aa14.71□□□□□ -0.05
MCF2L-202ENST00000375597 OTUD7AQ8TE49 926 aaPredicted RBP14.71□□□□□ -0.05
MCF2L-202ENST00000375597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.71□□□□□ -0.05
MCF2L-202ENST00000375597 WDR63Q8IWG1 891 aa14.71□□□□□ -0.05
MCF2L-202ENST00000375597 FBXO31Q5XUX0 539 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms