RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ESCO1Q5FWF5 840 aa20.96■□□□□ 0.95
NELFE-201ENST00000375425 TECPR2O15040 1411 aa20.96■□□□□ 0.95
NELFE-201ENST00000375425 SOS2Q07890 1332 aaPredicted RBP20.96■□□□□ 0.95
NELFE-201ENST00000375425 HRCP23327 699 aa20.95■□□□□ 0.95
NELFE-201ENST00000375425 CFAP70Q5T0N1 1121 aa20.95■□□□□ 0.95
NELFE-201ENST00000375425 PNPLA6Q8IY17 1366 aa20.95■□□□□ 0.94
NELFE-201ENST00000375425 IFT172Q9UG01 1749 aa20.94■□□□□ 0.94
NELFE-201ENST00000375425 PLEKHH1Q9ULM0 1364 aa20.94■□□□□ 0.94
NELFE-201ENST00000375425 NUTM2FA1L443 756 aa20.94■□□□□ 0.94
NELFE-201ENST00000375425 YTHDC2Q9H6S0 1430 aaKnown RBP20.93■□□□□ 0.94
NELFE-201ENST00000375425 SIRT1Q96EB6 747 aa20.93■□□□□ 0.94
NELFE-201ENST00000375425 AFF2P51816 1311 aa20.91■□□□□ 0.94
NELFE-201ENST00000375425 C8orf37Q96NL8 207 aa20.91■□□□□ 0.94
NELFE-201ENST00000375425 DHX57Q6P158 1386 aaKnown RBP20.91■□□□□ 0.94
NELFE-201ENST00000375425 NRXN1Q9ULB1 1477 aa20.91■□□□□ 0.94
NELFE-201ENST00000375425 FOXO3O43524 673 aa20.9■□□□□ 0.94
NELFE-201ENST00000375425 RXRBP28702 533 aa20.89■□□□□ 0.94
NELFE-201ENST00000375425 KDM2AQ9Y2K7 1162 aa20.89■□□□□ 0.94
NELFE-201ENST00000375425 NPHP3Q7Z494 1330 aa20.89■□□□□ 0.93
NELFE-201ENST00000375425 ADAMTS2O95450 1211 aa20.88■□□□□ 0.93
NELFE-201ENST00000375425 MYOM2P54296 1465 aa20.88■□□□□ 0.93
NELFE-201ENST00000375425 CDC42BPGQ6DT37 1551 aa20.88■□□□□ 0.93
NELFE-201ENST00000375425 DCAF11Q8TEB1 546 aa20.87■□□□□ 0.93
NELFE-201ENST00000375425 LAMC1P11047 1609 aa20.87■□□□□ 0.93
NELFE-201ENST00000375425 XPCQ01831 940 aaPredicted RBP20.87■□□□□ 0.93
NELFE-201ENST00000375425 SAFB2Q14151 953 aaKnown RBP eCLIP20.86■□□□□ 0.93
NELFE-201ENST00000375425 NGLY1Q96IV0 654 aa20.86■□□□□ 0.93
NELFE-201ENST00000375425 PRAM1Q96QH2 718 aa20.85■□□□□ 0.93
NELFE-201ENST00000375425 QTRT2Q9H974 415 aaKnown RBP20.85■□□□□ 0.93
NELFE-201ENST00000375425 KNDC1Q76NI1 1749 aa20.83■□□□□ 0.93
NELFE-201ENST00000375425 STAC3Q96MF2 364 aa20.82■□□□□ 0.92
NELFE-201ENST00000375425 POGKQ9P215 609 aa20.82■□□□□ 0.92
NELFE-201ENST00000375425 TRAK1Q9UPV9 953 aa20.81■□□□□ 0.92
NELFE-201ENST00000375425 PXDNQ92626 1479 aa20.8■□□□□ 0.92
NELFE-201ENST00000375425 RBM6P78332 1123 aaKnown RBP20.78■□□□□ 0.92
NELFE-201ENST00000375425 KRT28Q7Z3Y7 464 aa20.78■□□□□ 0.92
NELFE-201ENST00000375425 FNBP4Q8N3X1 1017 aaPredicted RBP20.78■□□□□ 0.92
NELFE-201ENST00000375425 USP21Q9UK80 565 aa20.78■□□□□ 0.92
NELFE-201ENST00000375425 PHF8Q9UPP1 1060 aa20.78■□□□□ 0.92
NELFE-201ENST00000375425 SPATA31A3Q5VYP0 1347 aa20.76■□□□□ 0.91
NELFE-201ENST00000375425 ADGRB1O14514 1584 aa20.75■□□□□ 0.91
NELFE-201ENST00000375425 UPF1Q92900 1129 aaKnown RBP eCLIP20.75■□□□□ 0.91
NELFE-201ENST00000375425 HIRIP3Q9BW71 556 aaPredicted RBP20.75■□□□□ 0.91
NELFE-201ENST00000375425 FMN2Q9NZ56 1722 aa20.75■□□□□ 0.91
NELFE-201ENST00000375425 DLC1Q96QB1 1528 aa20.74■□□□□ 0.91
NELFE-201ENST00000375425 CDK12Q9NYV4 1490 aaPredicted RBP20.74■□□□□ 0.91
NELFE-201ENST00000375425 PSME1Q06323 249 aa20.73■□□□□ 0.91
NELFE-201ENST00000375425 TRPC5Q9UL62 973 aaPredicted RBP20.73■□□□□ 0.91
NELFE-201ENST00000375425 COL22A1Q8NFW1 1626 aaPredicted RBP20.72■□□□□ 0.91
NELFE-201ENST00000375425 MINK1Q8N4C8 1332 aaPredicted RBP20.72■□□□□ 0.91
NELFE-201ENST00000375425 PMFBP1Q8TBY8 1022 aa20.72■□□□□ 0.91
NELFE-201ENST00000375425 RGS12O14924 1447 aa20.68■□□□□ 0.9
NELFE-201ENST00000375425 WASLO00401 505 aaPredicted RBP20.68■□□□□ 0.9
NELFE-201ENST00000375425 KIF1AQ12756 1690 aa20.68■□□□□ 0.9
NELFE-201ENST00000375425 ANKARQ7Z5J8 1434 aa20.67■□□□□ 0.9
NELFE-201ENST00000375425 LMOD2Q6P5Q4 547 aa20.67■□□□□ 0.9
NELFE-201ENST00000375425 RGPD8O14715 1765 aaPredicted RBP20.66■□□□□ 0.9
NELFE-201ENST00000375425 PLEKHG5O94827 1062 aa20.66■□□□□ 0.9
NELFE-201ENST00000375425 CABLES1Q8TDN4 633 aa20.66■□□□□ 0.9
NELFE-201ENST00000375425 SBNO1A3KN83 1393 aa20.66■□□□□ 0.9
NELFE-201ENST00000375425 BCL9LQ86UU0 1499 aa20.66■□□□□ 0.9
NELFE-201ENST00000375425 PRR36Q9H6K5 1346 aa20.65■□□□□ 0.9
NELFE-201ENST00000375425 ATRNO75882 1429 aa20.65■□□□□ 0.9
NELFE-201ENST00000375425 TNS3Q68CZ2 1445 aa20.65■□□□□ 0.9
NELFE-201ENST00000375425 HAP1P54257 671 aaPredicted RBP20.64■□□□□ 0.89
NELFE-201ENST00000375425 ADGRB2O60241 1585 aa20.63■□□□□ 0.89
NELFE-201ENST00000375425 EIF3AQ14152 1382 aaKnown RBP20.63■□□□□ 0.89
NELFE-201ENST00000375425 UNC5CLQ8IV45 518 aa20.62■□□□□ 0.89
NELFE-201ENST00000375425 GJD4Q96KN9 370 aaPredicted RBP20.62■□□□□ 0.89
NELFE-201ENST00000375425 NBPF1Q3BBV0 1214 aa20.61■□□□□ 0.89
NELFE-201ENST00000375425 USP32Q8NFA0 1604 aa20.61■□□□□ 0.89
NELFE-201ENST00000375425 ARHGEF10O15013 1369 aa20.61■□□□□ 0.89
NELFE-201ENST00000375425 GPRASP1Q5JY77 1395 aa20.6■□□□□ 0.89
NELFE-201ENST00000375425 NGDNQ8NEJ9 315 aaKnown RBP20.6■□□□□ 0.89
NELFE-201ENST00000375425 NUDT16Q96DE0 195 aaKnown RBP20.59■□□□□ 0.89
NELFE-201ENST00000375425 CDK19Q9BWU1 502 aa20.59■□□□□ 0.89
NELFE-201ENST00000375425 SLIT2O94813 1529 aa20.58■□□□□ 0.88
NELFE-201ENST00000375425 TULP4Q9NRJ4 1543 aa20.58■□□□□ 0.88
NELFE-201ENST00000375425 FAM83GA6ND36 823 aa20.56■□□□□ 0.88
NELFE-201ENST00000375425 PAK3O75914 559 aaPredicted RBP20.56■□□□□ 0.88
NELFE-201ENST00000375425 L3MBTL2Q969R5 705 aa20.56■□□□□ 0.88
NELFE-201ENST00000375425 SIN3AQ96ST3 1273 aa20.56■□□□□ 0.88
NELFE-201ENST00000375425 MARF1Q9Y4F3 1742 aaKnown RBP20.56■□□□□ 0.88
NELFE-201ENST00000375425 EP400Q96L91 3159 aa20.56■□□□□ 0.88
NELFE-201ENST00000375425 ATAD2Q6PL18 1390 aa20.54■□□□□ 0.88
NELFE-201ENST00000375425 ARHGEF28Q8N1W1 1705 aaKnown RBP20.53■□□□□ 0.88
NELFE-201ENST00000375425 NEUROD1Q13562 356 aa20.53■□□□□ 0.88
NELFE-201ENST00000375425 VPS72Q15906 364 aa20.52■□□□□ 0.87
NELFE-201ENST00000375425 CCDC61Q9Y6R9 512 aa20.52■□□□□ 0.87
NELFE-201ENST00000375425 ATP7BP35670 1465 aa20.51■□□□□ 0.87
NELFE-201ENST00000375425 RALGAPBQ86X10 1494 aa20.51■□□□□ 0.87
NELFE-201ENST00000375425 KIAA1210Q9ULL0 1709 aa20.5■□□□□ 0.87
NELFE-201ENST00000375425 CCDC9Q9Y3X0 531 aaKnown RBP20.5■□□□□ 0.87
NELFE-201ENST00000375425 CENPJQ9HC77 1338 aaPredicted RBP20.49■□□□□ 0.87
NELFE-201ENST00000375425 NBPF8Q3BBV2 869 aa20.49■□□□□ 0.87
NELFE-201ENST00000375425 TRPM3Q9HCF6 1732 aaPredicted RBP20.48■□□□□ 0.87
NELFE-201ENST00000375425 PLEKHG3A1L390 1219 aa20.48■□□□□ 0.87
NELFE-201ENST00000375425 BTG4Q9NY30 223 aa20.48■□□□□ 0.87
NELFE-201ENST00000375425 ACEP12821 1306 aa20.47■□□□□ 0.87
NELFE-201ENST00000375425 SRPK2P78362 688 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms