RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 LRPPRCP42704 1394 aaKnown RBP21.19■□□□□ 0.98
PTCH1-202ENST00000375271 RRBP1Q9P2E9 1410 aaKnown RBP21.19■□□□□ 0.98
PTCH1-202ENST00000375271 PPLO60437 1756 aa21.18■□□□□ 0.98
PTCH1-202ENST00000375271 PRAG1Q86YV5 1406 aa21.17■□□□□ 0.98
PTCH1-202ENST00000375271 CDC42BPGQ6DT37 1551 aa21.16■□□□□ 0.98
PTCH1-202ENST00000375271 COL22A1Q8NFW1 1626 aaPredicted RBP21.15■□□□□ 0.98
PTCH1-202ENST00000375271 FNBP4Q8N3X1 1017 aaPredicted RBP21.14■□□□□ 0.97
PTCH1-202ENST00000375271 STK26Q9P289 416 aa21.14■□□□□ 0.97
PTCH1-202ENST00000375271 ZRANB1Q9UGI0 708 aa21.14■□□□□ 0.97
PTCH1-202ENST00000375271 CCDC144AA2RUR9 1427 aa21.13■□□□□ 0.97
PTCH1-202ENST00000375271 ATRNO75882 1429 aa21.12■□□□□ 0.97
PTCH1-202ENST00000375271 NUTM2FA1L443 756 aa21.12■□□□□ 0.97
PTCH1-202ENST00000375271 FOXO3O43524 673 aa21.12■□□□□ 0.97
PTCH1-202ENST00000375271 HAP1P54257 671 aaPredicted RBP21.12■□□□□ 0.97
PTCH1-202ENST00000375271 XPCQ01831 940 aaPredicted RBP21.12■□□□□ 0.97
PTCH1-202ENST00000375271 MYOM2P54296 1465 aa21.1■□□□□ 0.97
PTCH1-202ENST00000375271 RGL3Q3MIN7 710 aa21.1■□□□□ 0.97
PTCH1-202ENST00000375271 MARF1Q9Y4F3 1742 aaKnown RBP21.09■□□□□ 0.97
PTCH1-202ENST00000375271 CCDC125Q86Z20 511 aa21.09■□□□□ 0.97
PTCH1-202ENST00000375271 ANKRD30BQ9BXX2 1392 aa21.08■□□□□ 0.96
PTCH1-202ENST00000375271 PXDNQ92626 1479 aa21.07■□□□□ 0.96
PTCH1-202ENST00000375271 GJD4Q96KN9 370 aaPredicted RBP21.06■□□□□ 0.96
PTCH1-202ENST00000375271 ADGRF5Q8IZF2 1346 aa21.05■□□□□ 0.96
PTCH1-202ENST00000375271 WAPLQ7Z5K2 1190 aa21.05■□□□□ 0.96
PTCH1-202ENST00000375271 KIF1AQ12756 1690 aa21.05■□□□□ 0.96
PTCH1-202ENST00000375271 SF3B2Q13435 895 aaKnown RBP21.04■□□□□ 0.96
PTCH1-202ENST00000375271 BCL9LQ86UU0 1499 aa21.03■□□□□ 0.96
PTCH1-202ENST00000375271 KNDC1Q76NI1 1749 aa21.03■□□□□ 0.96
PTCH1-202ENST00000375271 TECPR2O15040 1411 aa21.03■□□□□ 0.96
PTCH1-202ENST00000375271 UNC5CLQ8IV45 518 aa21.02■□□□□ 0.96
PTCH1-202ENST00000375271 PSME1Q06323 249 aa21.01■□□□□ 0.95
PTCH1-202ENST00000375271 TMEM132EQ6IEE7 984 aa21.01■□□□□ 0.95
PTCH1-202ENST00000375271 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.01■□□□□ 0.95
PTCH1-202ENST00000375271 ABCC11Q96J66 1382 aa21■□□□□ 0.95
PTCH1-202ENST00000375271 PLEKHG5O94827 1062 aa21■□□□□ 0.95
PTCH1-202ENST00000375271 LMOD2Q6P5Q4 547 aa21■□□□□ 0.95
PTCH1-202ENST00000375271 CCDC9Q9Y3X0 531 aaKnown RBP21■□□□□ 0.95
PTCH1-202ENST00000375271 FMN2Q9NZ56 1722 aa21■□□□□ 0.95
PTCH1-202ENST00000375271 EP400Q96L91 3159 aa21■□□□□ 0.95
PTCH1-202ENST00000375271 KRT28Q7Z3Y7 464 aa20.99■□□□□ 0.95
PTCH1-202ENST00000375271 SPATA31A3Q5VYP0 1347 aa20.99■□□□□ 0.95
PTCH1-202ENST00000375271 SRCAPQ6ZRS2 3230 aa20.99■□□□□ 0.95
PTCH1-202ENST00000375271 IFT172Q9UG01 1749 aa20.98■□□□□ 0.95
PTCH1-202ENST00000375271 YTHDC2Q9H6S0 1430 aaKnown RBP20.98■□□□□ 0.95
PTCH1-202ENST00000375271 USP32Q8NFA0 1604 aa20.97■□□□□ 0.95
PTCH1-202ENST00000375271 RALGAPBQ86X10 1494 aa20.97■□□□□ 0.95
PTCH1-202ENST00000375271 PLEKHH1Q9ULM0 1364 aa20.97■□□□□ 0.95
PTCH1-202ENST00000375271 PIK3C2GO75747 1445 aa20.96■□□□□ 0.95
PTCH1-202ENST00000375271 SPATA31E1Q6ZUB1 1445 aa20.96■□□□□ 0.95
PTCH1-202ENST00000375271 A0A0G2JS52 829 aa20.96■□□□□ 0.95
PTCH1-202ENST00000375271 MYT1Q01538 1121 aa20.96■□□□□ 0.95
PTCH1-202ENST00000375271 MPHOSPH9Q99550 1183 aa20.96■□□□□ 0.95
PTCH1-202ENST00000375271 BLMP54132 1417 aaPredicted RBP20.95■□□□□ 0.95
PTCH1-202ENST00000375271 TNS3Q68CZ2 1445 aa20.95■□□□□ 0.95
PTCH1-202ENST00000375271 PHF8Q9UPP1 1060 aa20.95■□□□□ 0.94
PTCH1-202ENST00000375271 DHX57Q6P158 1386 aaKnown RBP20.95■□□□□ 0.94
PTCH1-202ENST00000375271 SLIT2O94813 1529 aa20.94■□□□□ 0.94
PTCH1-202ENST00000375271 ACIN1Q9UKV3 1341 aaKnown RBP20.93■□□□□ 0.94
PTCH1-202ENST00000375271 SAFB2Q14151 953 aaKnown RBP eCLIP20.92■□□□□ 0.94
PTCH1-202ENST00000375271 POGKQ9P215 609 aa20.92■□□□□ 0.94
PTCH1-202ENST00000375271 ARHGEF10O15013 1369 aa20.92■□□□□ 0.94
PTCH1-202ENST00000375271 GLI3P10071 1580 aa20.92■□□□□ 0.94
PTCH1-202ENST00000375271 SEPT12Q8IYM1 358 aa20.9■□□□□ 0.94
PTCH1-202ENST00000375271 SIRT1Q96EB6 747 aa20.9■□□□□ 0.94
PTCH1-202ENST00000375271 VPS72Q15906 364 aa20.89■□□□□ 0.93
PTCH1-202ENST00000375271 CABLES1Q8TDN4 633 aa20.89■□□□□ 0.93
PTCH1-202ENST00000375271 PLCH1Q4KWH8 1693 aa20.89■□□□□ 0.93
PTCH1-202ENST00000375271 RGPD8O14715 1765 aaPredicted RBP20.88■□□□□ 0.93
PTCH1-202ENST00000375271 NWD2Q9ULI1 1742 aa20.88■□□□□ 0.93
PTCH1-202ENST00000375271 PRAM1Q96QH2 718 aa20.88■□□□□ 0.93
PTCH1-202ENST00000375271 SBNO1A3KN83 1393 aa20.87■□□□□ 0.93
PTCH1-202ENST00000375271 C14orf93Q9H972 538 aaKnown RBP20.87■□□□□ 0.93
PTCH1-202ENST00000375271 BRWD3Q6RI45 1802 aa20.87■□□□□ 0.93
PTCH1-202ENST00000375271 KRT27Q7Z3Y8 459 aa20.86■□□□□ 0.93
PTCH1-202ENST00000375271 NRXN1Q9ULB1 1477 aa20.86■□□□□ 0.93
PTCH1-202ENST00000375271 CFAP70Q5T0N1 1121 aa20.85■□□□□ 0.93
PTCH1-202ENST00000375271 DEFB132Q7Z7B7 95 aa20.85■□□□□ 0.93
PTCH1-202ENST00000375271 EIF3AQ14152 1382 aaKnown RBP20.85■□□□□ 0.93
PTCH1-202ENST00000375271 GPRASP1Q5JY77 1395 aa20.85■□□□□ 0.93
PTCH1-202ENST00000375271 PMFBP1Q8TBY8 1022 aa20.84■□□□□ 0.93
PTCH1-202ENST00000375271 BAG6P46379 1132 aa20.83■□□□□ 0.93
PTCH1-202ENST00000375271 ANKARQ7Z5J8 1434 aa20.83■□□□□ 0.93
PTCH1-202ENST00000375271 ABCA3Q99758 1704 aa20.82■□□□□ 0.92
PTCH1-202ENST00000375271 DLC1Q96QB1 1528 aa20.78■□□□□ 0.92
PTCH1-202ENST00000375271 FAM98CQ17RN3 349 aaKnown RBP20.78■□□□□ 0.92
PTCH1-202ENST00000375271 HIRIP3Q9BW71 556 aaPredicted RBP20.78■□□□□ 0.92
PTCH1-202ENST00000375271 BTG4Q9NY30 223 aa20.78■□□□□ 0.92
PTCH1-202ENST00000375271 FAM83GA6ND36 823 aa20.77■□□□□ 0.92
PTCH1-202ENST00000375271 PAK3O75914 559 aaPredicted RBP20.77■□□□□ 0.92
PTCH1-202ENST00000375271 TRAK1Q9UPV9 953 aa20.77■□□□□ 0.92
PTCH1-202ENST00000375271 ADGRB2O60241 1585 aa20.76■□□□□ 0.91
PTCH1-202ENST00000375271 ONECUT3O60422 494 aaPredicted RBP20.76■□□□□ 0.91
PTCH1-202ENST00000375271 NGDNQ8NEJ9 315 aaKnown RBP20.76■□□□□ 0.91
PTCH1-202ENST00000375271 MINK1Q8N4C8 1332 aaPredicted RBP20.76■□□□□ 0.91
PTCH1-202ENST00000375271 COL14A1Q05707 1796 aaKnown RBP20.75■□□□□ 0.91
PTCH1-202ENST00000375271 PSDA5PKW4 1024 aaPredicted RBP20.72■□□□□ 0.91
PTCH1-202ENST00000375271 PRDM11Q9NQV5 511 aa20.72■□□□□ 0.91
PTCH1-202ENST00000375271 KDM2AQ9Y2K7 1162 aa20.72■□□□□ 0.91
PTCH1-202ENST00000375271 NRAPQ86VF7 1730 aa20.72■□□□□ 0.91
PTCH1-202ENST00000375271 TULP4Q9NRJ4 1543 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms