RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 IL27Q8NEV9 243 aa25.66■■□□□ 1.7
TGFBR1-202ENST00000374994 VPS37CA5D8V6 355 aaPredicted RBP25.65■■□□□ 1.7
TGFBR1-202ENST00000374994 DDX58O95786 925 aaKnown RBP25.65■■□□□ 1.7
TGFBR1-202ENST00000374994 A0A0U1RQG5 324 aaPredicted RBP25.65■■□□□ 1.7
TGFBR1-202ENST00000374994 GRIN2BQ13224 1484 aa25.65■■□□□ 1.7
TGFBR1-202ENST00000374994 TEX35Q5T0J7 233 aa25.65■■□□□ 1.7
TGFBR1-202ENST00000374994 C9orf84Q5VXU9 1444 aa25.64■■□□□ 1.7
TGFBR1-202ENST00000374994 R3HCC1Q9Y3T6 440 aaKnown RBP25.64■■□□□ 1.7
TGFBR1-202ENST00000374994 EXOSC9Q06265 439 aaKnown RBP25.64■■□□□ 1.7
TGFBR1-202ENST00000374994 NBPF1Q3BBV0 1214 aa25.64■■□□□ 1.7
TGFBR1-202ENST00000374994 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.64■■□□□ 1.7
TGFBR1-202ENST00000374994 ZNF592Q92610 1267 aa25.64■■□□□ 1.7
TGFBR1-202ENST00000374994 ERBINQ96RT1 1412 aa25.64■■□□□ 1.69
TGFBR1-202ENST00000374994 GNAI3P08754 354 aa25.64■■□□□ 1.69
TGFBR1-202ENST00000374994 G3BP1Q13283 466 aaKnown RBP eCLIP25.63■■□□□ 1.69
TGFBR1-202ENST00000374994 GGNBP2Q9H3C7 697 aa25.63■■□□□ 1.69
TGFBR1-202ENST00000374994 DAPK1P53355 1430 aa25.63■■□□□ 1.69
TGFBR1-202ENST00000374994 TPD52L1Q16890 204 aaPredicted RBP25.63■■□□□ 1.69
TGFBR1-202ENST00000374994 CCDC73Q6ZRK6 1079 aa25.63■■□□□ 1.69
TGFBR1-202ENST00000374994 HOOK1Q9UJC3 728 aaKnown RBP25.63■■□□□ 1.69
TGFBR1-202ENST00000374994 BCAR3O75815 825 aa25.63■■□□□ 1.69
TGFBR1-202ENST00000374994 SYNE3Q6ZMZ3 975 aa25.63■■□□□ 1.69
TGFBR1-202ENST00000374994 TOMM22Q9NS69 142 aa25.63■■□□□ 1.69
TGFBR1-202ENST00000374994 TROQ12816 1431 aaPredicted RBP25.62■■□□□ 1.69
TGFBR1-202ENST00000374994 PLEKHH2Q8IVE3 1493 aa25.62■■□□□ 1.69
TGFBR1-202ENST00000374994 CCDC70Q6NSX1 233 aa25.62■■□□□ 1.69
TGFBR1-202ENST00000374994 CAVIN1Q6NZI2 390 aaKnown RBP25.62■■□□□ 1.69
TGFBR1-202ENST00000374994 TSPYL4Q9UJ04 414 aa25.62■■□□□ 1.69
TGFBR1-202ENST00000374994 ARGLU1Q9NWB6 273 aaPredicted RBP25.61■■□□□ 1.69
TGFBR1-202ENST00000374994 MVPQ14764 893 aaKnown RBP25.61■■□□□ 1.69
TGFBR1-202ENST00000374994 AQRO60306 1485 aaKnown RBP eCLIP25.6■■□□□ 1.69
TGFBR1-202ENST00000374994 TRIM29Q14134 588 aa25.6■■□□□ 1.69
TGFBR1-202ENST00000374994 HECW1Q76N89 1606 aa25.6■■□□□ 1.69
TGFBR1-202ENST00000374994 CPLX1O14810 134 aa25.6■■□□□ 1.69
TGFBR1-202ENST00000374994 MSH5O43196 834 aa25.6■■□□□ 1.69
TGFBR1-202ENST00000374994 ZNF428Q96B54 188 aa25.6■■□□□ 1.69
TGFBR1-202ENST00000374994 AKAP17AQ02040 695 aaKnown RBP25.59■■□□□ 1.69
TGFBR1-202ENST00000374994 TSPY26PQ9H489 355 aa25.59■■□□□ 1.69
TGFBR1-202ENST00000374994 PSMA5P28066 241 aa25.59■■□□□ 1.69
TGFBR1-202ENST00000374994 CFAP70Q5T0N1 1121 aa25.59■■□□□ 1.69
TGFBR1-202ENST00000374994 GRPEL1Q9HAV7 217 aa25.59■■□□□ 1.69
TGFBR1-202ENST00000374994 IFT57Q9NWB7 429 aa25.59■■□□□ 1.69
TGFBR1-202ENST00000374994 MCM4P33991 863 aa25.58■■□□□ 1.69
TGFBR1-202ENST00000374994 NUTM2FA1L443 756 aa25.58■■□□□ 1.69
TGFBR1-202ENST00000374994 K7ELQ4 463 aaPredicted RBP25.57■■□□□ 1.68
TGFBR1-202ENST00000374994 EIF2S2P20042 333 aaKnown RBP25.57■■□□□ 1.68
TGFBR1-202ENST00000374994 HOMER1Q86YM7 354 aa25.57■■□□□ 1.68
TGFBR1-202ENST00000374994 SYNJ2O15056 1496 aa25.57■■□□□ 1.68
TGFBR1-202ENST00000374994 SLFN5Q08AF3 891 aa25.57■■□□□ 1.68
TGFBR1-202ENST00000374994 ANKRD20A12PQ8NF67 263 aa25.57■■□□□ 1.68
TGFBR1-202ENST00000374994 PDCP20941 246 aa25.56■■□□□ 1.68
TGFBR1-202ENST00000374994 NAT10Q9H0A0 1025 aaKnown RBP25.56■■□□□ 1.68
TGFBR1-202ENST00000374994 ATF7IPQ6VMQ6 1270 aa25.56■■□□□ 1.68
TGFBR1-202ENST00000374994 CCAR2Q8N163 923 aaKnown RBP25.56■■□□□ 1.68
TGFBR1-202ENST00000374994 SUPT6HQ7KZ85 1726 aaKnown RBP25.56■■□□□ 1.68
TGFBR1-202ENST00000374994 CREBRFQ8IUR6 639 aa25.56■■□□□ 1.68
TGFBR1-202ENST00000374994 HMOX1P09601 288 aa25.56■■□□□ 1.68
TGFBR1-202ENST00000374994 UBTFL1P0CB47 393 aaPredicted RBP25.56■■□□□ 1.68
TGFBR1-202ENST00000374994 NEK4P51957 841 aa25.55■■□□□ 1.68
TGFBR1-202ENST00000374994 CNTROBQ8N137 903 aa25.55■■□□□ 1.68
TGFBR1-202ENST00000374994 PRDM2Q13029 1718 aa25.54■■□□□ 1.68
TGFBR1-202ENST00000374994 PRPF40AO75400 957 aaKnown RBP25.54■■□□□ 1.68
TGFBR1-202ENST00000374994 SETQ01105 290 aaPredicted RBP25.54■■□□□ 1.68
TGFBR1-202ENST00000374994 IPO7O95373 1038 aaKnown RBP25.54■■□□□ 1.68
TGFBR1-202ENST00000374994 CABP2Q9NPB3 220 aa25.54■■□□□ 1.68
TGFBR1-202ENST00000374994 TWISTNBQ3B726 338 aaPredicted RBP25.53■■□□□ 1.68
TGFBR1-202ENST00000374994 RNF214Q8ND24 703 aa25.53■■□□□ 1.68
TGFBR1-202ENST00000374994 NOB1Q9ULX3 412 aaKnown RBP25.53■■□□□ 1.68
TGFBR1-202ENST00000374994 ANKRD30BQ9BXX2 1392 aa25.52■■□□□ 1.68
TGFBR1-202ENST00000374994 ARHGAP5Q13017 1502 aa25.52■■□□□ 1.68
TGFBR1-202ENST00000374994 TTC5Q8N0Z6 440 aa25.52■■□□□ 1.68
TGFBR1-202ENST00000374994 TRDNQ13061 729 aa25.52■■□□□ 1.68
TGFBR1-202ENST00000374994 CLSTN1O94985 981 aa25.51■■□□□ 1.67
TGFBR1-202ENST00000374994 PRKAR2BP31323 418 aa25.51■■□□□ 1.67
TGFBR1-202ENST00000374994 NCOA1Q15788 1441 aa25.5■■□□□ 1.67
TGFBR1-202ENST00000374994 MNS1Q8NEH6 495 aa25.5■■□□□ 1.67
TGFBR1-202ENST00000374994 HMGXB3Q12766 1538 aa25.5■■□□□ 1.67
TGFBR1-202ENST00000374994 HIP1O00291 1037 aa25.5■■□□□ 1.67
TGFBR1-202ENST00000374994 DHX8Q14562 1220 aaKnown RBP25.49■■□□□ 1.67
TGFBR1-202ENST00000374994 ESPNB1AK53 854 aa25.49■■□□□ 1.67
TGFBR1-202ENST00000374994 CCDC30Q5VVM6 783 aa25.49■■□□□ 1.67
TGFBR1-202ENST00000374994 PES1O00541 588 aaKnown RBP25.48■■□□□ 1.67
TGFBR1-202ENST00000374994 CLASRPQ8N2M8 674 aaKnown RBP25.48■■□□□ 1.67
TGFBR1-202ENST00000374994 CHD1LQ86WJ1 897 aa25.48■■□□□ 1.67
TGFBR1-202ENST00000374994 CCDC47Q96A33 483 aaKnown RBP25.47■■□□□ 1.67
TGFBR1-202ENST00000374994 ACBD3Q9H3P7 528 aa25.47■■□□□ 1.67
TGFBR1-202ENST00000374994 GAS2L2Q8NHY3 880 aa25.47■■□□□ 1.67
TGFBR1-202ENST00000374994 WDR33Q9C0J8 1336 aaKnown RBP25.47■■□□□ 1.67
TGFBR1-202ENST00000374994 TMEM132EQ6IEE7 984 aa25.46■■□□□ 1.67
TGFBR1-202ENST00000374994 ANO8Q9HCE9 1232 aaPredicted RBP25.46■■□□□ 1.67
TGFBR1-202ENST00000374994 RRP9O43818 475 aaKnown RBP25.45■■□□□ 1.67
TGFBR1-202ENST00000374994 GNAI2P04899 355 aa25.44■■□□□ 1.66
TGFBR1-202ENST00000374994 TSR2Q969E8 191 aaKnown RBP25.44■■□□□ 1.66
TGFBR1-202ENST00000374994 NECTIN2Q92692 538 aa25.44■■□□□ 1.66
TGFBR1-202ENST00000374994 CCT4P50991 539 aaKnown RBP25.44■■□□□ 1.66
TGFBR1-202ENST00000374994 CCP110O43303 1012 aa25.44■■□□□ 1.66
TGFBR1-202ENST00000374994 AEBP1Q8IUX7 1158 aa25.43■■□□□ 1.66
TGFBR1-202ENST00000374994 TRIM5Q9C035 493 aa25.43■■□□□ 1.66
TGFBR1-202ENST00000374994 PRG4Q92954 1404 aaPredicted RBP25.43■■□□□ 1.66
TGFBR1-202ENST00000374994 PDIA4P13667 645 aaKnown RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms