RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 GOLGA2Q08379 1002 aa21.09■□□□□ 0.97
CNKSR1-202ENST00000374253 C20orf194Q5TEA3 1177 aa21.09■□□□□ 0.97
CNKSR1-202ENST00000374253 PRAM1Q96QH2 718 aa21.09■□□□□ 0.97
CNKSR1-202ENST00000374253 TMEM131LA2VDJ0 1609 aa21.09■□□□□ 0.97
CNKSR1-202ENST00000374253 ZNF521Q96K83 1311 aa21.07■□□□□ 0.96
CNKSR1-202ENST00000374253 NEUROD2Q15784 382 aa21.07■□□□□ 0.96
CNKSR1-202ENST00000374253 DMRT2Q9Y5R5 561 aa21.07■□□□□ 0.96
CNKSR1-202ENST00000374253 POGKQ9P215 609 aa21.07■□□□□ 0.96
CNKSR1-202ENST00000374253 CRBNQ96SW2 442 aa21.06■□□□□ 0.96
CNKSR1-202ENST00000374253 MTHFSP49914 203 aa21.05■□□□□ 0.96
CNKSR1-202ENST00000374253 RRP7AQ9Y3A4 280 aaKnown RBP21.05■□□□□ 0.96
CNKSR1-202ENST00000374253 CGNL1Q0VF96 1302 aa21.04■□□□□ 0.96
CNKSR1-202ENST00000374253 MSH5O43196 834 aa21.04■□□□□ 0.96
CNKSR1-202ENST00000374253 CLTCQ00610 1675 aaKnown RBP21.04■□□□□ 0.96
CNKSR1-202ENST00000374253 SLFN5Q08AF3 891 aa21.02■□□□□ 0.96
CNKSR1-202ENST00000374253 ZFYVE9O95405 1425 aa21.01■□□□□ 0.95
CNKSR1-202ENST00000374253 SKAP1Q86WV1 359 aa21.01■□□□□ 0.95
CNKSR1-202ENST00000374253 GGNBP2Q9H3C7 697 aa21.01■□□□□ 0.95
CNKSR1-202ENST00000374253 YTHDC2Q9H6S0 1430 aaKnown RBP21■□□□□ 0.95
CNKSR1-202ENST00000374253 POLR3AO14802 1390 aaPredicted RBP21■□□□□ 0.95
CNKSR1-202ENST00000374253 ANKRD36BQ8N2N9 1353 aa21■□□□□ 0.95
CNKSR1-202ENST00000374253 A0A1W2PP64 1363 aa21■□□□□ 0.95
CNKSR1-202ENST00000374253 WAPLQ7Z5K2 1190 aa20.99■□□□□ 0.95
CNKSR1-202ENST00000374253 PTPRMP28827 1452 aa20.99■□□□□ 0.95
CNKSR1-202ENST00000374253 ESF1Q9H501 851 aaKnown RBP20.96■□□□□ 0.95
CNKSR1-202ENST00000374253 ALKQ9UM73 1620 aa20.96■□□□□ 0.95
CNKSR1-202ENST00000374253 CDK19Q9BWU1 502 aa20.95■□□□□ 0.94
CNKSR1-202ENST00000374253 BCAR3O75815 825 aa20.95■□□□□ 0.94
CNKSR1-202ENST00000374253 A2ML1A8K2U0 1454 aa20.94■□□□□ 0.94
CNKSR1-202ENST00000374253 FANCIQ9NVI1 1328 aa20.94■□□□□ 0.94
CNKSR1-202ENST00000374253 WWC1Q8IX03 1113 aa20.94■□□□□ 0.94
CNKSR1-202ENST00000374253 SHPRHQ149N8 1683 aa20.93■□□□□ 0.94
CNKSR1-202ENST00000374253 TCP11L2Q8N4U5 519 aa20.93■□□□□ 0.94
CNKSR1-202ENST00000374253 CABP1Q9NZU7 370 aa20.93■□□□□ 0.94
CNKSR1-202ENST00000374253 AGLP35573 1532 aa20.93■□□□□ 0.94
CNKSR1-202ENST00000374253 TRMT2AQ8IZ69 625 aaKnown RBP20.93■□□□□ 0.94
CNKSR1-202ENST00000374253 ANP32EQ9BTT0 268 aa20.93■□□□□ 0.94
CNKSR1-202ENST00000374253 KIF13AQ9H1H9 1805 aa20.92■□□□□ 0.94
CNKSR1-202ENST00000374253 RIMS2Q9UQ26 1411 aa20.92■□□□□ 0.94
CNKSR1-202ENST00000374253 U2AF1L5P0DN76 240 aaPredicted RBP20.92■□□□□ 0.94
CNKSR1-202ENST00000374253 U2AF1Q01081 240 aaKnown RBP eCLIP20.92■□□□□ 0.94
CNKSR1-202ENST00000374253 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
CNKSR1-202ENST00000374253 CFAP53Q96M91 514 aa20.92■□□□□ 0.94
CNKSR1-202ENST00000374253 PUS7Q96PZ0 661 aaKnown RBP20.92■□□□□ 0.94
CNKSR1-202ENST00000374253 E9PSI1 815 aa20.91■□□□□ 0.94
CNKSR1-202ENST00000374253 RUNDC1Q96C34 613 aa20.91■□□□□ 0.94
CNKSR1-202ENST00000374253 FBLN1P23142 703 aa20.9■□□□□ 0.94
CNKSR1-202ENST00000374253 PPP6R1Q9UPN7 881 aa20.89■□□□□ 0.94
CNKSR1-202ENST00000374253 ZMYM3Q14202 1370 aa20.89■□□□□ 0.94
CNKSR1-202ENST00000374253 REREQ9P2R6 1566 aa20.89■□□□□ 0.94
CNKSR1-202ENST00000374253 FYB1O15117 783 aa20.89■□□□□ 0.93
CNKSR1-202ENST00000374253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.89■□□□□ 0.93
CNKSR1-202ENST00000374253 NKTRP30414 1462 aaKnown RBP20.89■□□□□ 0.93
CNKSR1-202ENST00000374253 U2SURPO15042 1029 aaKnown RBP20.88■□□□□ 0.93
CNKSR1-202ENST00000374253 TERF2IPQ9NYB0 399 aa20.88■□□□□ 0.93
CNKSR1-202ENST00000374253 USP32Q8NFA0 1604 aa20.88■□□□□ 0.93
CNKSR1-202ENST00000374253 ABCC11Q96J66 1382 aa20.88■□□□□ 0.93
CNKSR1-202ENST00000374253 ATAD2Q6PL18 1390 aa20.87■□□□□ 0.93
CNKSR1-202ENST00000374253 SPATA31D1Q6ZQQ2 1576 aa20.87■□□□□ 0.93
CNKSR1-202ENST00000374253 TXNDC2Q86VQ3 553 aa20.87■□□□□ 0.93
CNKSR1-202ENST00000374253 CD163L1Q9NR16 1453 aa20.86■□□□□ 0.93
CNKSR1-202ENST00000374253 ARHGEF40Q8TER5 1519 aa20.86■□□□□ 0.93
CNKSR1-202ENST00000374253 NSD2O96028 1365 aa20.85■□□□□ 0.93
CNKSR1-202ENST00000374253 METP08581 1390 aa20.85■□□□□ 0.93
CNKSR1-202ENST00000374253 HDGFL2Q7Z4V5 671 aaPredicted RBP20.84■□□□□ 0.93
CNKSR1-202ENST00000374253 NCKAP5LQ9HCH0 1330 aa20.84■□□□□ 0.93
CNKSR1-202ENST00000374253 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.84■□□□□ 0.93
CNKSR1-202ENST00000374253 PPM1GO15355 546 aaPredicted RBP20.83■□□□□ 0.93
CNKSR1-202ENST00000374253 CEBPAP49715 358 aaPredicted RBP20.82■□□□□ 0.92
CNKSR1-202ENST00000374253 BCL2L13Q9BXK5 485 aa20.81■□□□□ 0.92
CNKSR1-202ENST00000374253 NINLQ9Y2I6 1382 aa20.81■□□□□ 0.92
CNKSR1-202ENST00000374253 FRAT1Q92837 279 aaPredicted RBP20.81■□□□□ 0.92
CNKSR1-202ENST00000374253 MYT1Q01538 1121 aa20.8■□□□□ 0.92
CNKSR1-202ENST00000374253 IQSEC2Q5JU85 1478 aa20.8■□□□□ 0.92
CNKSR1-202ENST00000374253 CANXP27824 592 aaKnown RBP20.79■□□□□ 0.92
CNKSR1-202ENST00000374253 ERICH6Q7L0X2 663 aa20.79■□□□□ 0.92
CNKSR1-202ENST00000374253 NPM2Q86SE8 214 aaKnown RBP20.79■□□□□ 0.92
CNKSR1-202ENST00000374253 PANK1Q8TE04 598 aa20.78■□□□□ 0.92
CNKSR1-202ENST00000374253 NLRP1Q9C000 1473 aa20.78■□□□□ 0.92
CNKSR1-202ENST00000374253 TCERG1O14776 1098 aaKnown RBP20.77■□□□□ 0.92
CNKSR1-202ENST00000374253 NGEFQ8N5V2 710 aa20.77■□□□□ 0.92
CNKSR1-202ENST00000374253 ZRANB1Q9UGI0 708 aa20.77■□□□□ 0.92
CNKSR1-202ENST00000374253 TNRQ92752 1358 aa20.77■□□□□ 0.91
CNKSR1-202ENST00000374253 SETD1AO15047 1707 aaKnown RBP20.76■□□□□ 0.91
CNKSR1-202ENST00000374253 PDE4AP27815 886 aa20.76■□□□□ 0.91
CNKSR1-202ENST00000374253 TNNQ9UQP3 1299 aa20.76■□□□□ 0.91
CNKSR1-202ENST00000374253 NRXN3Q9Y4C0 1643 aa20.76■□□□□ 0.91
CNKSR1-202ENST00000374253 NUTM2FA1L443 756 aa20.75■□□□□ 0.91
CNKSR1-202ENST00000374253 TSR2Q969E8 191 aaKnown RBP20.75■□□□□ 0.91
CNKSR1-202ENST00000374253 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
CNKSR1-202ENST00000374253 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.75■□□□□ 0.91
CNKSR1-202ENST00000374253 COG6Q9Y2V7 657 aa20.75■□□□□ 0.91
CNKSR1-202ENST00000374253 WASLO00401 505 aaPredicted RBP20.74■□□□□ 0.91
CNKSR1-202ENST00000374253 KDM2BQ8NHM5 1336 aa20.74■□□□□ 0.91
CNKSR1-202ENST00000374253 NME9Q86XW9 330 aa20.73■□□□□ 0.91
CNKSR1-202ENST00000374253 DIAPH1O60610 1272 aaKnown RBP20.72■□□□□ 0.91
CNKSR1-202ENST00000374253 WDR63Q8IWG1 891 aa20.72■□□□□ 0.91
CNKSR1-202ENST00000374253 PLEKHF1Q96S99 279 aa20.72■□□□□ 0.91
CNKSR1-202ENST00000374253 RARSP54136 660 aaKnown RBP20.72■□□□□ 0.91
CNKSR1-202ENST00000374253 COL3A1P02461 1466 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms