RNA–Protein interactions for RNA: ENST00000374014.3

LINC00474-201, long intergenic non-protein coding RNA 474, humanhuman

TSL 1 (best) BASIC

Gene LINC00474, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474-201ENST00000374014 GPIHBP1Q8IV16 184 aa9.96□□□□□ -0.82
LINC00474-201ENST00000374014 TTC24A2A3L6 582 aaPredicted RBP9.95□□□□□ -0.82
LINC00474-201ENST00000374014 SMCPP49901 116 aaPredicted RBP9.95□□□□□ -0.82
LINC00474-201ENST00000374014 GMPR2Q9P2T1 348 aaKnown RBP9.95□□□□□ -0.82
LINC00474-201ENST00000374014 Q3C1V9 767 aa9.94□□□□□ -0.82
LINC00474-201ENST00000374014 C11orf95C9JLR9 678 aaPredicted RBP9.93□□□□□ -0.82
LINC00474-201ENST00000374014 WNT7AO00755 349 aa9.93□□□□□ -0.82
LINC00474-201ENST00000374014 CD46P15529 392 aa9.92□□□□□ -0.82
LINC00474-201ENST00000374014 MMP16P51512 607 aa9.92□□□□□ -0.82
LINC00474-201ENST00000374014 TRIM32Q13049 653 aa9.91□□□□□ -0.82
LINC00474-201ENST00000374014 SNIP1Q8TAD8 396 aaKnown RBP9.91□□□□□ -0.82
LINC00474-201ENST00000374014 SMPD1P17405 629 aa9.9□□□□□ -0.82
LINC00474-201ENST00000374014 KDM4AO75164 1064 aa9.89□□□□□ -0.83
LINC00474-201ENST00000374014 USB1Q9BQ65 265 aaKnown RBP9.89□□□□□ -0.83
LINC00474-201ENST00000374014 WFS1O76024 890 aa9.88□□□□□ -0.83
LINC00474-201ENST00000374014 MRGPRX2Q96LB1 330 aa9.88□□□□□ -0.83
LINC00474-201ENST00000374014 DXOO77932 396 aaKnown RBP9.87□□□□□ -0.83
LINC00474-201ENST00000374014 MAP2K5Q13163 448 aa9.87□□□□□ -0.83
LINC00474-201ENST00000374014 J3QL48 77 aa9.86□□□□□ -0.83
LINC00474-201ENST00000374014 ATP13A2Q9NQ11 1180 aa9.85□□□□□ -0.83
LINC00474-201ENST00000374014 IRF6O14896 467 aa9.84□□□□□ -0.83
LINC00474-201ENST00000374014 USP46P62068 366 aa9.84□□□□□ -0.83
LINC00474-201ENST00000374014 NFX1Q12986 1120 aaKnown RBP9.84□□□□□ -0.83
LINC00474-201ENST00000374014 HLA-CQ95604 372 aa9.84□□□□□ -0.83
LINC00474-201ENST00000374014 REPIN1Q9BWE0 567 aaKnown RBP9.84□□□□□ -0.83
LINC00474-201ENST00000374014 MDM2Q00987 491 aaPredicted RBP9.83□□□□□ -0.84
LINC00474-201ENST00000374014 CCDC24Q8N4L8 307 aa9.83□□□□□ -0.84
LINC00474-201ENST00000374014 HOXA2O43364 376 aa9.81□□□□□ -0.84
LINC00474-201ENST00000374014 SNRPBP14678 240 aaKnown RBP9.81□□□□□ -0.84
LINC00474-201ENST00000374014 RC3H1Q5TC82 1133 aaKnown RBP9.81□□□□□ -0.84
LINC00474-201ENST00000374014 HPS1Q92902 700 aa9.81□□□□□ -0.84
LINC00474-201ENST00000374014 SKOR1P84550 965 aa9.8□□□□□ -0.84
LINC00474-201ENST00000374014 TRIM47Q96LD4 638 aa9.8□□□□□ -0.84
LINC00474-201ENST00000374014 SENP2Q9HC62 589 aa9.8□□□□□ -0.84
LINC00474-201ENST00000374014 MINK1Q8N4C8 1332 aaPredicted RBP9.8□□□□□ -0.84
LINC00474-201ENST00000374014 WNT7BP56706 349 aa9.79□□□□□ -0.84
LINC00474-201ENST00000374014 KDM2AQ9Y2K7 1162 aa9.79□□□□□ -0.84
LINC00474-201ENST00000374014 WIPF1O43516 503 aa9.78□□□□□ -0.84
LINC00474-201ENST00000374014 HAP1P54257 671 aaPredicted RBP9.78□□□□□ -0.84
LINC00474-201ENST00000374014 TULP1O00294 542 aaPredicted RBP9.77□□□□□ -0.85
LINC00474-201ENST00000374014 GUCA2AQ02747 115 aa9.77□□□□□ -0.85
LINC00474-201ENST00000374014 JUNDP17535 347 aa9.76□□□□□ -0.85
LINC00474-201ENST00000374014 SYMPKQ92797 1274 aaKnown RBP9.76□□□□□ -0.85
LINC00474-201ENST00000374014 TERTO14746 1132 aaKnown RBP9.75□□□□□ -0.85
LINC00474-201ENST00000374014 INSM1Q01101 510 aaPredicted RBP9.75□□□□□ -0.85
LINC00474-201ENST00000374014 CCDC102AQ96A19 550 aa9.75□□□□□ -0.85
LINC00474-201ENST00000374014 GPCPD1Q9NPB8 672 aa9.75□□□□□ -0.85
LINC00474-201ENST00000374014 ALDH1A1P00352 501 aa9.74□□□□□ -0.85
LINC00474-201ENST00000374014 CLCN1P35523 988 aa9.74□□□□□ -0.85
LINC00474-201ENST00000374014 KIFC2Q96AC6 838 aa9.74□□□□□ -0.85
LINC00474-201ENST00000374014 FAM217BQ9NTX9 383 aaPredicted RBP9.74□□□□□ -0.85
LINC00474-201ENST00000374014 STK17AQ9UEE5 414 aa9.74□□□□□ -0.85
LINC00474-201ENST00000374014 LCE2CQ5TA81 110 aa9.73□□□□□ -0.85
LINC00474-201ENST00000374014 RETREG3Q86VR2 466 aa9.73□□□□□ -0.85
LINC00474-201ENST00000374014 NUTM1Q86Y26 1132 aa9.73□□□□□ -0.85
LINC00474-201ENST00000374014 PTCRAQ6ISU1 281 aaPredicted RBP9.72□□□□□ -0.85
LINC00474-201ENST00000374014 NUDT12Q9BQG2 462 aa9.72□□□□□ -0.85
LINC00474-201ENST00000374014 SIAH2O43255 324 aa9.7□□□□□ -0.86
LINC00474-201ENST00000374014 KRI1Q8N9T8 703 aaKnown RBP9.69□□□□□ -0.86
LINC00474-201ENST00000374014 EHBP1Q8NDI1 1231 aa9.69□□□□□ -0.86
LINC00474-201ENST00000374014 FDX1P10109 184 aa9.68□□□□□ -0.86
LINC00474-201ENST00000374014 PCDHGC3Q9UN70 934 aa9.67□□□□□ -0.86
LINC00474-201ENST00000374014 C6orf229H3BNL8 230 aa9.66□□□□□ -0.86
LINC00474-201ENST00000374014 WASF2Q9Y6W5 498 aa9.66□□□□□ -0.86
LINC00474-201ENST00000374014 CCNYL3P0C7X3 344 aa9.65□□□□□ -0.86
LINC00474-201ENST00000374014 MS4A1P11836 297 aa9.65□□□□□ -0.86
LINC00474-201ENST00000374014 SH3BP2P78314 561 aa9.65□□□□□ -0.86
LINC00474-201ENST00000374014 CAPN5O15484 640 aaPredicted RBP9.64□□□□□ -0.87
LINC00474-201ENST00000374014 BMP1P13497 986 aa9.64□□□□□ -0.87
LINC00474-201ENST00000374014 TRIM46Q7Z4K8 759 aa9.64□□□□□ -0.87
LINC00474-201ENST00000374014 SLC16A10Q8TF71 515 aa9.64□□□□□ -0.87
LINC00474-201ENST00000374014 NXF1Q9UBU9 619 aaKnown RBP9.64□□□□□ -0.87
LINC00474-201ENST00000374014 CCDC180Q9P1Z9 1646 aa9.64□□□□□ -0.87
LINC00474-201ENST00000374014 EVA1BQ9NVM1 165 aa9.63□□□□□ -0.87
LINC00474-201ENST00000374014 SSTR3P32745 418 aaPredicted RBP9.62□□□□□ -0.87
LINC00474-201ENST00000374014 PTPRNQ16849 979 aa9.62□□□□□ -0.87
LINC00474-201ENST00000374014 SPIRE2Q8WWL2 714 aa9.62□□□□□ -0.87
LINC00474-201ENST00000374014 UNC93B1Q9H1C4 597 aa9.61□□□□□ -0.87
LINC00474-201ENST00000374014 NDUFV2P19404 249 aa9.6□□□□□ -0.87
LINC00474-201ENST00000374014 VSIG10Q8N0Z9 540 aa9.6□□□□□ -0.87
LINC00474-201ENST00000374014 BAP1Q92560 729 aa9.6□□□□□ -0.87
LINC00474-201ENST00000374014 MOXD2PA6NHM9 499 aa9.59□□□□□ -0.87
LINC00474-201ENST00000374014 KCNH2Q12809 1159 aa9.59□□□□□ -0.87
LINC00474-201ENST00000374014 LINC01559Q495D7 138 aa9.59□□□□□ -0.87
LINC00474-201ENST00000374014 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.59□□□□□ -0.87
LINC00474-201ENST00000374014 NPAS3Q8IXF0 933 aa9.59□□□□□ -0.87
LINC00474-201ENST00000374014 PRR7Q8TB68 274 aa9.58□□□□□ -0.88
LINC00474-201ENST00000374014 GMPRP36959 345 aa9.57□□□□□ -0.88
LINC00474-201ENST00000374014 IRF7Q92985 503 aa9.57□□□□□ -0.88
LINC00474-201ENST00000374014 TLL2Q9Y6L7 1015 aa9.57□□□□□ -0.88
LINC00474-201ENST00000374014 PLEKHG3A1L390 1219 aa9.56□□□□□ -0.88
LINC00474-201ENST00000374014 SPDYE5A6NIY4 337 aa9.56□□□□□ -0.88
LINC00474-201ENST00000374014 VARSP26640 1264 aaKnown RBP9.56□□□□□ -0.88
LINC00474-201ENST00000374014 MTMR2Q13614 643 aa9.56□□□□□ -0.88
LINC00474-201ENST00000374014 DESI1Q6ICB0 168 aa9.56□□□□□ -0.88
LINC00474-201ENST00000374014 ZNF511Q8NB15 262 aa9.56□□□□□ -0.88
LINC00474-201ENST00000374014 ZFP42Q96MM3 310 aa9.56□□□□□ -0.88
LINC00474-201ENST00000374014 VEGFBP49765 207 aa9.55□□□□□ -0.88
LINC00474-201ENST00000374014 MPNDQ8N594 471 aa9.55□□□□□ -0.88
LINC00474-201ENST00000374014 FAM181BA6NEQ2 426 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms