RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 CENPJQ9HC77 1338 aaPredicted RBP20.32■□□□□ 0.84
RCC1-201ENST00000373831 SBNO2Q9Y2G9 1366 aa20.31■□□□□ 0.84
RCC1-201ENST00000373831 PRAM1Q96QH2 718 aa20.28■□□□□ 0.84
RCC1-201ENST00000373831 MED1Q15648 1581 aaPredicted RBP20.28■□□□□ 0.84
RCC1-201ENST00000373831 PIK3R4Q99570 1358 aa20.28■□□□□ 0.84
RCC1-201ENST00000373831 PLEKHH1Q9ULM0 1364 aa20.28■□□□□ 0.84
RCC1-201ENST00000373831 ROBO2Q9HCK4 1378 aa20.27■□□□□ 0.84
RCC1-201ENST00000373831 FAM135BQ49AJ0 1406 aa20.26■□□□□ 0.83
RCC1-201ENST00000373831 TULP4Q9NRJ4 1543 aa20.26■□□□□ 0.83
RCC1-201ENST00000373831 WAPLQ7Z5K2 1190 aa20.25■□□□□ 0.83
RCC1-201ENST00000373831 TMF1P82094 1093 aa20.25■□□□□ 0.83
RCC1-201ENST00000373831 SAFB2Q14151 953 aaKnown RBP eCLIP20.25■□□□□ 0.83
RCC1-201ENST00000373831 AMOTL2Q9Y2J4 779 aa20.25■□□□□ 0.83
RCC1-201ENST00000373831 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.24■□□□□ 0.83
RCC1-201ENST00000373831 DDX10Q13206 875 aaKnown RBP20.24■□□□□ 0.83
RCC1-201ENST00000373831 SIRT1Q96EB6 747 aa20.24■□□□□ 0.83
RCC1-201ENST00000373831 MYOM1P52179 1685 aa20.24■□□□□ 0.83
RCC1-201ENST00000373831 PTCH1Q13635 1447 aa20.23■□□□□ 0.83
RCC1-201ENST00000373831 NWD1Q149M9 1564 aa20.23■□□□□ 0.83
RCC1-201ENST00000373831 POGKQ9P215 609 aa20.23■□□□□ 0.83
RCC1-201ENST00000373831 DIEXFQ68CQ4 756 aaKnown RBP20.21■□□□□ 0.83
RCC1-201ENST00000373831 MINK1Q8N4C8 1332 aaPredicted RBP20.2■□□□□ 0.82
RCC1-201ENST00000373831 KCNA6P17658 529 aa20.2■□□□□ 0.82
RCC1-201ENST00000373831 POLR3GLQ9BT43 218 aa20.2■□□□□ 0.82
RCC1-201ENST00000373831 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
RCC1-201ENST00000373831 SLC24A1O60721 1099 aa20.18■□□□□ 0.82
RCC1-201ENST00000373831 ADGRB2O60241 1585 aa20.18■□□□□ 0.82
RCC1-201ENST00000373831 TMEM94Q12767 1356 aa20.17■□□□□ 0.82
RCC1-201ENST00000373831 RBM33Q96EV2 1170 aaKnown RBP20.17■□□□□ 0.82
RCC1-201ENST00000373831 PROSER2Q86WR7 435 aaPredicted RBP20.15■□□□□ 0.82
RCC1-201ENST00000373831 NALCNQ8IZF0 1738 aa20.15■□□□□ 0.82
RCC1-201ENST00000373831 EVC2Q86UK5 1308 aa20.14■□□□□ 0.82
RCC1-201ENST00000373831 CDCA8Q53HL2 280 aa20.14■□□□□ 0.81
RCC1-201ENST00000373831 XIRP1Q702N8 1843 aaKnown RBP20.14■□□□□ 0.81
RCC1-201ENST00000373831 CABP2Q9NPB3 220 aa20.11■□□□□ 0.81
RCC1-201ENST00000373831 NKTRP30414 1462 aaKnown RBP20.1■□□□□ 0.81
RCC1-201ENST00000373831 PUS7Q96PZ0 661 aaKnown RBP20.1■□□□□ 0.81
RCC1-201ENST00000373831 CDK19Q9BWU1 502 aa20.1■□□□□ 0.81
RCC1-201ENST00000373831 WASLO00401 505 aaPredicted RBP20.08■□□□□ 0.81
RCC1-201ENST00000373831 RGPD8O14715 1765 aaPredicted RBP20.08■□□□□ 0.8
RCC1-201ENST00000373831 USP32Q8NFA0 1604 aa20.07■□□□□ 0.8
RCC1-201ENST00000373831 SRPK2P78362 688 aaKnown RBP20.07■□□□□ 0.8
RCC1-201ENST00000373831 TOPAZ1Q8N9V7 1692 aa20.06■□□□□ 0.8
RCC1-201ENST00000373831 FMN2Q9NZ56 1722 aa20.06■□□□□ 0.8
RCC1-201ENST00000373831 CDC42BPGQ6DT37 1551 aa20.05■□□□□ 0.8
RCC1-201ENST00000373831 PANK3Q9H999 370 aa20.04■□□□□ 0.8
RCC1-201ENST00000373831 RGS17Q9UGC6 210 aaPredicted RBP20.04■□□□□ 0.8
RCC1-201ENST00000373831 MSH6P52701 1360 aa20.03■□□□□ 0.8
RCC1-201ENST00000373831 ATAD2Q6PL18 1390 aa20.03■□□□□ 0.8
RCC1-201ENST00000373831 ADGRL3Q9HAR2 1447 aa20.03■□□□□ 0.8
RCC1-201ENST00000373831 ATP7BP35670 1465 aa20.03■□□□□ 0.8
RCC1-201ENST00000373831 SLC12A5Q9H2X9 1139 aa20.03■□□□□ 0.8
RCC1-201ENST00000373831 PRR36Q9H6K5 1346 aa20.02■□□□□ 0.8
RCC1-201ENST00000373831 PER1O15534 1290 aaPredicted RBP20.01■□□□□ 0.79
RCC1-201ENST00000373831 ITSN1Q15811 1721 aa20.01■□□□□ 0.79
RCC1-201ENST00000373831 CD163L1Q9NR16 1453 aa20.01■□□□□ 0.79
RCC1-201ENST00000373831 MIER1Q8N108 512 aa20■□□□□ 0.79
RCC1-201ENST00000373831 TMC1Q8TDI8 760 aa20■□□□□ 0.79
RCC1-201ENST00000373831 SLAIN2Q9P270 581 aa20■□□□□ 0.79
RCC1-201ENST00000373831 ROBO1Q9Y6N7 1651 aa20■□□□□ 0.79
RCC1-201ENST00000373831 NINLQ9Y2I6 1382 aa19.99■□□□□ 0.79
RCC1-201ENST00000373831 NUDT16Q96DE0 195 aaKnown RBP19.99■□□□□ 0.79
RCC1-201ENST00000373831 AKAP12Q02952 1782 aa19.99■□□□□ 0.79
RCC1-201ENST00000373831 CARD14Q9BXL6 1004 aa19.97■□□□□ 0.79
RCC1-201ENST00000373831 PPIP5K1Q6PFW1 1433 aa19.97■□□□□ 0.79
RCC1-201ENST00000373831 CABP1Q9NZU7 370 aa19.96■□□□□ 0.79
RCC1-201ENST00000373831 ANKRD36BQ8N2N9 1353 aa19.96■□□□□ 0.79
RCC1-201ENST00000373831 NUTM2FA1L443 756 aa19.95■□□□□ 0.78
RCC1-201ENST00000373831 MON2Q7Z3U7 1717 aa19.95■□□□□ 0.78
RCC1-201ENST00000373831 C14orf37Q86TY3 774 aa19.95■□□□□ 0.78
RCC1-201ENST00000373831 NCOA3Q9Y6Q9 1424 aa19.95■□□□□ 0.78
RCC1-201ENST00000373831 A0A1W2PP64 1363 aa19.95■□□□□ 0.78
RCC1-201ENST00000373831 ANKARQ7Z5J8 1434 aa19.95■□□□□ 0.78
RCC1-201ENST00000373831 CCDC61Q9Y6R9 512 aa19.95■□□□□ 0.78
RCC1-201ENST00000373831 POTEAQ6S8J7 498 aa19.92■□□□□ 0.78
RCC1-201ENST00000373831 CPSF1Q10570 1443 aaKnown RBP19.92■□□□□ 0.78
RCC1-201ENST00000373831 ANP32CO43423 234 aa19.91■□□□□ 0.78
RCC1-201ENST00000373831 C19orf44Q9H6X5 657 aa19.91■□□□□ 0.78
RCC1-201ENST00000373831 NSD3Q9BZ95 1437 aa19.91■□□□□ 0.78
RCC1-201ENST00000373831 AMER1Q5JTC6 1135 aaPredicted RBP19.91■□□□□ 0.78
RCC1-201ENST00000373831 PRKRIP1Q9H875 184 aaPredicted RBP19.9■□□□□ 0.78
RCC1-201ENST00000373831 KIF20BQ96Q89 1820 aa19.89■□□□□ 0.77
RCC1-201ENST00000373831 PLEKHG3A1L390 1219 aa19.89■□□□□ 0.77
RCC1-201ENST00000373831 KNSTRNQ9Y448 316 aa19.89■□□□□ 0.77
RCC1-201ENST00000373831 DCCP43146 1447 aa19.89■□□□□ 0.77
RCC1-201ENST00000373831 NRKQ7Z2Y5 1582 aa19.89■□□□□ 0.77
RCC1-201ENST00000373831 JCADQ9P266 1359 aa19.88■□□□□ 0.77
RCC1-201ENST00000373831 CADPS2Q86UW7 1296 aa19.88■□□□□ 0.77
RCC1-201ENST00000373831 TERF2IPQ9NYB0 399 aa19.88■□□□□ 0.77
RCC1-201ENST00000373831 ATF3P18847 181 aa19.87■□□□□ 0.77
RCC1-201ENST00000373831 CNGB1Q14028 1251 aaPredicted RBP19.87■□□□□ 0.77
RCC1-201ENST00000373831 PHLPP1O60346 1717 aa19.87■□□□□ 0.77
RCC1-201ENST00000373831 NPC1L1Q9UHC9 1359 aa19.86■□□□□ 0.77
RCC1-201ENST00000373831 ANKRD26Q9UPS8 1709 aa19.86■□□□□ 0.77
RCC1-201ENST00000373831 CC2D1BQ5T0F9 858 aaKnown RBP19.86■□□□□ 0.77
RCC1-201ENST00000373831 HDGFL2Q7Z4V5 671 aaPredicted RBP19.86■□□□□ 0.77
RCC1-201ENST00000373831 MST1RQ04912 1400 aa19.85■□□□□ 0.77
RCC1-201ENST00000373831 ACEP12821 1306 aa19.85■□□□□ 0.77
RCC1-201ENST00000373831 POLR3AO14802 1390 aaPredicted RBP19.85■□□□□ 0.77
RCC1-201ENST00000373831 KTN1Q86UP2 1357 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms