RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 SIRT1Q96EB6 747 aa23.25■■□□□ 1.31
HDAC8-208ENST00000373583 STK26Q9P289 416 aa23.25■■□□□ 1.31
HDAC8-208ENST00000373583 JCADQ9P266 1359 aa23.23■■□□□ 1.31
HDAC8-208ENST00000373583 PLEKHH1Q9ULM0 1364 aa23.23■■□□□ 1.31
HDAC8-208ENST00000373583 ADGRB2O60241 1585 aa23.23■■□□□ 1.31
HDAC8-208ENST00000373583 ARHGEF28Q8N1W1 1705 aaKnown RBP23.22■■□□□ 1.31
HDAC8-208ENST00000373583 KDM2AQ9Y2K7 1162 aa23.21■■□□□ 1.31
HDAC8-208ENST00000373583 WAPLQ7Z5K2 1190 aa23.19■■□□□ 1.3
HDAC8-208ENST00000373583 KIF1AQ12756 1690 aa23.17■■□□□ 1.3
HDAC8-208ENST00000373583 RGPD8O14715 1765 aaPredicted RBP23.15■■□□□ 1.3
HDAC8-208ENST00000373583 SPATA31A6Q5VVP1 1343 aa23.12■■□□□ 1.29
HDAC8-208ENST00000373583 PRAM1Q96QH2 718 aa23.12■■□□□ 1.29
HDAC8-208ENST00000373583 TRPM1Q7Z4N2 1603 aa23.11■■□□□ 1.29
HDAC8-208ENST00000373583 USP32Q8NFA0 1604 aa23.11■■□□□ 1.29
HDAC8-208ENST00000373583 ORAI2Q96SN7 254 aa23.1■■□□□ 1.29
HDAC8-208ENST00000373583 LRP6O75581 1613 aa23.09■■□□□ 1.29
HDAC8-208ENST00000373583 ILDR2Q71H61 639 aa23.09■■□□□ 1.29
HDAC8-208ENST00000373583 PHF23Q9BUL5 403 aaPredicted RBP23.09■■□□□ 1.29
HDAC8-208ENST00000373583 TRAK1Q9UPV9 953 aa23.08■■□□□ 1.29
HDAC8-208ENST00000373583 COL22A1Q8NFW1 1626 aaPredicted RBP23.08■■□□□ 1.28
HDAC8-208ENST00000373583 SOS2Q07890 1332 aaPredicted RBP23.08■■□□□ 1.28
HDAC8-208ENST00000373583 PXDNQ92626 1479 aa23.07■■□□□ 1.28
HDAC8-208ENST00000373583 LRRC59Q96AG4 307 aaKnown RBP23.07■■□□□ 1.28
HDAC8-208ENST00000373583 SIN3AQ96ST3 1273 aa23.07■■□□□ 1.28
HDAC8-208ENST00000373583 POGKQ9P215 609 aa23.07■■□□□ 1.28
HDAC8-208ENST00000373583 ANKARQ7Z5J8 1434 aa23.07■■□□□ 1.28
HDAC8-208ENST00000373583 DDX17Q92841 729 aaKnown RBP23.06■■□□□ 1.28
HDAC8-208ENST00000373583 L3MBTL2Q969R5 705 aa23.06■■□□□ 1.28
HDAC8-208ENST00000373583 PNPLA6Q8IY17 1366 aa23.05■■□□□ 1.28
HDAC8-208ENST00000373583 NPHP3Q7Z494 1330 aa23.05■■□□□ 1.28
HDAC8-208ENST00000373583 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
HDAC8-208ENST00000373583 TULP4Q9NRJ4 1543 aa23.04■■□□□ 1.28
HDAC8-208ENST00000373583 SAFB2Q14151 953 aaKnown RBP eCLIP23.04■■□□□ 1.28
HDAC8-208ENST00000373583 ESCO1Q5FWF5 840 aa23.04■■□□□ 1.28
HDAC8-208ENST00000373583 EIF3AQ14152 1382 aaKnown RBP23.03■■□□□ 1.28
HDAC8-208ENST00000373583 QRICH2Q9H0J4 1663 aa23■■□□□ 1.27
HDAC8-208ENST00000373583 NUTM2FA1L443 756 aa23■■□□□ 1.27
HDAC8-208ENST00000373583 NEUROD1Q13562 356 aa23■■□□□ 1.27
HDAC8-208ENST00000373583 RGS17Q9UGC6 210 aaPredicted RBP22.99■■□□□ 1.27
HDAC8-208ENST00000373583 TOPAZ1Q8N9V7 1692 aa22.98■■□□□ 1.27
HDAC8-208ENST00000373583 NBPF1Q3BBV0 1214 aa22.98■■□□□ 1.27
HDAC8-208ENST00000373583 MINK1Q8N4C8 1332 aaPredicted RBP22.98■■□□□ 1.27
HDAC8-208ENST00000373583 MARF1Q9Y4F3 1742 aaKnown RBP22.97■■□□□ 1.27
HDAC8-208ENST00000373583 FOXO3O43524 673 aa22.96■■□□□ 1.27
HDAC8-208ENST00000373583 ATP7BP35670 1465 aa22.95■■□□□ 1.26
HDAC8-208ENST00000373583 HIRIP3Q9BW71 556 aaPredicted RBP22.95■■□□□ 1.26
HDAC8-208ENST00000373583 TRPM3Q9HCF6 1732 aaPredicted RBP22.94■■□□□ 1.26
HDAC8-208ENST00000373583 WASLO00401 505 aaPredicted RBP22.94■■□□□ 1.26
HDAC8-208ENST00000373583 PHF8Q9UPP1 1060 aa22.94■■□□□ 1.26
HDAC8-208ENST00000373583 TONSLQ96HA7 1378 aa22.92■■□□□ 1.26
HDAC8-208ENST00000373583 MEX3CQ5U5Q3 659 aaKnown RBP22.92■■□□□ 1.26
HDAC8-208ENST00000373583 ABCA3Q99758 1704 aa22.91■■□□□ 1.26
HDAC8-208ENST00000373583 GPRASP1Q5JY77 1395 aa22.91■■□□□ 1.26
HDAC8-208ENST00000373583 PRR36Q9H6K5 1346 aa22.91■■□□□ 1.26
HDAC8-208ENST00000373583 NUTM2BA6NNL0 878 aaPredicted RBP22.9■■□□□ 1.26
HDAC8-208ENST00000373583 NUTM2EB1AL46 878 aaPredicted RBP22.9■■□□□ 1.26
HDAC8-208ENST00000373583 NUTM2AQ8IVF1 878 aaPredicted RBP22.9■■□□□ 1.26
HDAC8-208ENST00000373583 ALS2Q96Q42 1657 aa22.9■■□□□ 1.26
HDAC8-208ENST00000373583 TNS3Q68CZ2 1445 aa22.9■■□□□ 1.26
HDAC8-208ENST00000373583 ROCK2O75116 1388 aaKnown RBP22.89■■□□□ 1.26
HDAC8-208ENST00000373583 CENPJQ9HC77 1338 aaPredicted RBP22.89■■□□□ 1.26
HDAC8-208ENST00000373583 SOCS7O14512 581 aa22.89■■□□□ 1.25
HDAC8-208ENST00000373583 XPCQ01831 940 aaPredicted RBP22.89■■□□□ 1.25
HDAC8-208ENST00000373583 RALGAPBQ86X10 1494 aa22.89■■□□□ 1.25
HDAC8-208ENST00000373583 SBNO1A3KN83 1393 aa22.89■■□□□ 1.25
HDAC8-208ENST00000373583 SPATA31A3Q5VYP0 1347 aa22.88■■□□□ 1.25
HDAC8-208ENST00000373583 POTEAQ6S8J7 498 aa22.87■■□□□ 1.25
HDAC8-208ENST00000373583 KRT28Q7Z3Y7 464 aa22.86■■□□□ 1.25
HDAC8-208ENST00000373583 NBPF8Q3BBV2 869 aa22.85■■□□□ 1.25
HDAC8-208ENST00000373583 ZNF772Q68DY9 489 aaPredicted RBP22.85■■□□□ 1.25
HDAC8-208ENST00000373583 PSME1Q06323 249 aa22.84■■□□□ 1.25
HDAC8-208ENST00000373583 CRYBG1Q9Y4K1 1723 aa22.83■■□□□ 1.25
HDAC8-208ENST00000373583 ARHGEF10O15013 1369 aa22.82■■□□□ 1.24
HDAC8-208ENST00000373583 PMFBP1Q8TBY8 1022 aa22.82■■□□□ 1.24
HDAC8-208ENST00000373583 CDK19Q9BWU1 502 aa22.82■■□□□ 1.24
HDAC8-208ENST00000373583 AFF2P51816 1311 aa22.82■■□□□ 1.24
HDAC8-208ENST00000373583 NUDT16Q96DE0 195 aaKnown RBP22.81■■□□□ 1.24
HDAC8-208ENST00000373583 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.81■■□□□ 1.24
HDAC8-208ENST00000373583 CLSPNQ9HAW4 1339 aa22.8■■□□□ 1.24
HDAC8-208ENST00000373583 POLR3AO14802 1390 aaPredicted RBP22.79■■□□□ 1.24
HDAC8-208ENST00000373583 C8orf37Q96NL8 207 aa22.79■■□□□ 1.24
HDAC8-208ENST00000373583 SBNO2Q9Y2G9 1366 aa22.78■■□□□ 1.24
HDAC8-208ENST00000373583 ADAMTS2O95450 1211 aa22.78■■□□□ 1.24
HDAC8-208ENST00000373583 PCGF6Q9BYE7 350 aa22.77■■□□□ 1.24
HDAC8-208ENST00000373583 CCDC61Q9Y6R9 512 aa22.77■■□□□ 1.24
HDAC8-208ENST00000373583 CDK12Q9NYV4 1490 aaPredicted RBP22.76■■□□□ 1.23
HDAC8-208ENST00000373583 PLCH1Q4KWH8 1693 aa22.75■■□□□ 1.23
HDAC8-208ENST00000373583 NWD2Q9ULI1 1742 aa22.75■■□□□ 1.23
HDAC8-208ENST00000373583 NGDNQ8NEJ9 315 aaKnown RBP22.75■■□□□ 1.23
HDAC8-208ENST00000373583 PPIP5K1Q6PFW1 1433 aa22.74■■□□□ 1.23
HDAC8-208ENST00000373583 PLEKHG3A1L390 1219 aa22.74■■□□□ 1.23
HDAC8-208ENST00000373583 NGLY1Q96IV0 654 aa22.74■■□□□ 1.23
HDAC8-208ENST00000373583 PHRF1Q9P1Y6 1649 aaKnown RBP22.73■■□□□ 1.23
HDAC8-208ENST00000373583 SRPK2P78362 688 aaKnown RBP22.73■■□□□ 1.23
HDAC8-208ENST00000373583 FNBP4Q8N3X1 1017 aaPredicted RBP22.73■■□□□ 1.23
HDAC8-208ENST00000373583 CARD11Q9BXL7 1154 aa22.73■■□□□ 1.23
HDAC8-208ENST00000373583 EVC2Q86UK5 1308 aa22.73■■□□□ 1.23
HDAC8-208ENST00000373583 AKAP12Q02952 1782 aa22.72■■□□□ 1.23
HDAC8-208ENST00000373583 SLIT2O94813 1529 aa22.71■■□□□ 1.23
HDAC8-208ENST00000373583 CABP2Q9NPB3 220 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms