RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 DHX57Q6P158 1386 aaKnown RBP26.52■■□□□ 1.84
TRAPPC3-202ENST00000373162 SIRT1Q96EB6 747 aa26.52■■□□□ 1.84
TRAPPC3-202ENST00000373162 FMN2Q9NZ56 1722 aa26.51■■□□□ 1.83
TRAPPC3-202ENST00000373162 DLC1Q96QB1 1528 aa26.51■■□□□ 1.83
TRAPPC3-202ENST00000373162 CFAP70Q5T0N1 1121 aa26.51■■□□□ 1.83
TRAPPC3-202ENST00000373162 WAPLQ7Z5K2 1190 aa26.49■■□□□ 1.83
TRAPPC3-202ENST00000373162 DDX17Q92841 729 aaKnown RBP26.48■■□□□ 1.83
TRAPPC3-202ENST00000373162 ORAI2Q96SN7 254 aa26.48■■□□□ 1.83
TRAPPC3-202ENST00000373162 STK26Q9P289 416 aa26.48■■□□□ 1.83
TRAPPC3-202ENST00000373162 PNPLA6Q8IY17 1366 aa26.46■■□□□ 1.83
TRAPPC3-202ENST00000373162 SOS2Q07890 1332 aaPredicted RBP26.46■■□□□ 1.83
TRAPPC3-202ENST00000373162 POTEAQ6S8J7 498 aa26.46■■□□□ 1.83
TRAPPC3-202ENST00000373162 ADGRB2O60241 1585 aa26.43■■□□□ 1.82
TRAPPC3-202ENST00000373162 PXDNQ92626 1479 aa26.42■■□□□ 1.82
TRAPPC3-202ENST00000373162 LRRC59Q96AG4 307 aaKnown RBP26.42■■□□□ 1.82
TRAPPC3-202ENST00000373162 STAC3Q96MF2 364 aa26.42■■□□□ 1.82
TRAPPC3-202ENST00000373162 COL22A1Q8NFW1 1626 aaPredicted RBP26.42■■□□□ 1.82
TRAPPC3-202ENST00000373162 KIF1AQ12756 1690 aa26.38■■□□□ 1.81
TRAPPC3-202ENST00000373162 USP32Q8NFA0 1604 aa26.37■■□□□ 1.81
TRAPPC3-202ENST00000373162 DCAF11Q8TEB1 546 aa26.37■■□□□ 1.81
TRAPPC3-202ENST00000373162 KIAA1210Q9ULL0 1709 aa26.36■■□□□ 1.81
TRAPPC3-202ENST00000373162 RGPD8O14715 1765 aaPredicted RBP26.35■■□□□ 1.81
TRAPPC3-202ENST00000373162 ARHGEF28Q8N1W1 1705 aaKnown RBP26.34■■□□□ 1.81
TRAPPC3-202ENST00000373162 PRAM1Q96QH2 718 aa26.33■■□□□ 1.81
TRAPPC3-202ENST00000373162 NPHP3Q7Z494 1330 aa26.32■■□□□ 1.8
TRAPPC3-202ENST00000373162 ESCO1Q5FWF5 840 aa26.31■■□□□ 1.8
TRAPPC3-202ENST00000373162 KDM2AQ9Y2K7 1162 aa26.31■■□□□ 1.8
TRAPPC3-202ENST00000373162 ANKARQ7Z5J8 1434 aa26.29■■□□□ 1.8
TRAPPC3-202ENST00000373162 NUTM2BA6NNL0 878 aaPredicted RBP26.27■■□□□ 1.8
TRAPPC3-202ENST00000373162 NUTM2EB1AL46 878 aaPredicted RBP26.27■■□□□ 1.8
TRAPPC3-202ENST00000373162 NUTM2AQ8IVF1 878 aaPredicted RBP26.27■■□□□ 1.8
TRAPPC3-202ENST00000373162 NUTM2FA1L443 756 aa26.26■■□□□ 1.79
TRAPPC3-202ENST00000373162 FOXO3O43524 673 aa26.26■■□□□ 1.79
TRAPPC3-202ENST00000373162 MEX3CQ5U5Q3 659 aaKnown RBP26.24■■□□□ 1.79
TRAPPC3-202ENST00000373162 ZNF772Q68DY9 489 aaPredicted RBP26.24■■□□□ 1.79
TRAPPC3-202ENST00000373162 TRAK1Q9UPV9 953 aa26.24■■□□□ 1.79
TRAPPC3-202ENST00000373162 MARF1Q9Y4F3 1742 aaKnown RBP26.23■■□□□ 1.79
TRAPPC3-202ENST00000373162 TULP4Q9NRJ4 1543 aa26.23■■□□□ 1.79
TRAPPC3-202ENST00000373162 AFF2P51816 1311 aa26.22■■□□□ 1.79
TRAPPC3-202ENST00000373162 SAFB2Q14151 953 aaKnown RBP eCLIP26.22■■□□□ 1.79
TRAPPC3-202ENST00000373162 CDK12Q9NYV4 1490 aaPredicted RBP26.21■■□□□ 1.79
TRAPPC3-202ENST00000373162 PRR36Q9H6K5 1346 aa26.2■■□□□ 1.79
TRAPPC3-202ENST00000373162 XPCQ01831 940 aaPredicted RBP26.2■■□□□ 1.78
TRAPPC3-202ENST00000373162 TRPM3Q9HCF6 1732 aaPredicted RBP26.19■■□□□ 1.78
TRAPPC3-202ENST00000373162 SPATA31A3Q5VYP0 1347 aa26.19■■□□□ 1.78
TRAPPC3-202ENST00000373162 POGKQ9P215 609 aa26.19■■□□□ 1.78
TRAPPC3-202ENST00000373162 PHF8Q9UPP1 1060 aa26.18■■□□□ 1.78
TRAPPC3-202ENST00000373162 ABCA3Q99758 1704 aa26.17■■□□□ 1.78
TRAPPC3-202ENST00000373162 ATP7BP35670 1465 aa26.16■■□□□ 1.78
TRAPPC3-202ENST00000373162 TNS3Q68CZ2 1445 aa26.15■■□□□ 1.78
TRAPPC3-202ENST00000373162 C8orf37Q96NL8 207 aa26.15■■□□□ 1.78
TRAPPC3-202ENST00000373162 SBNO1A3KN83 1393 aa26.15■■□□□ 1.78
TRAPPC3-202ENST00000373162 MINK1Q8N4C8 1332 aaPredicted RBP26.14■■□□□ 1.78
TRAPPC3-202ENST00000373162 HIRIP3Q9BW71 556 aaPredicted RBP26.14■■□□□ 1.78
TRAPPC3-202ENST00000373162 EIF3AQ14152 1382 aaKnown RBP26.14■■□□□ 1.78
TRAPPC3-202ENST00000373162 TOPAZ1Q8N9V7 1692 aa26.13■■□□□ 1.77
TRAPPC3-202ENST00000373162 ALS2Q96Q42 1657 aa26.13■■□□□ 1.77
TRAPPC3-202ENST00000373162 WASLO00401 505 aaPredicted RBP26.13■■□□□ 1.77
TRAPPC3-202ENST00000373162 NBPF1Q3BBV0 1214 aa26.13■■□□□ 1.77
TRAPPC3-202ENST00000373162 KRT28Q7Z3Y7 464 aa26.13■■□□□ 1.77
TRAPPC3-202ENST00000373162 FNBP4Q8N3X1 1017 aaPredicted RBP26.13■■□□□ 1.77
TRAPPC3-202ENST00000373162 TRPM1Q7Z4N2 1603 aa26.13■■□□□ 1.77
TRAPPC3-202ENST00000373162 ADAMTS2O95450 1211 aa26.12■■□□□ 1.77
TRAPPC3-202ENST00000373162 L3MBTL2Q969R5 705 aa26.11■■□□□ 1.77
TRAPPC3-202ENST00000373162 SIN3AQ96ST3 1273 aa26.11■■□□□ 1.77
TRAPPC3-202ENST00000373162 ITSN1Q15811 1721 aa26.11■■□□□ 1.77
TRAPPC3-202ENST00000373162 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.1■■□□□ 1.77
TRAPPC3-202ENST00000373162 BCL9LQ86UU0 1499 aa26.1■■□□□ 1.77
TRAPPC3-202ENST00000373162 ATRNO75882 1429 aa26.09■■□□□ 1.77
TRAPPC3-202ENST00000373162 CRYBG1Q9Y4K1 1723 aa26.08■■□□□ 1.77
TRAPPC3-202ENST00000373162 RGS12O14924 1447 aa26.08■■□□□ 1.77
TRAPPC3-202ENST00000373162 RXRBP28702 533 aa26.07■■□□□ 1.76
TRAPPC3-202ENST00000373162 SLIT2O94813 1529 aa26.07■■□□□ 1.76
TRAPPC3-202ENST00000373162 NGLY1Q96IV0 654 aa26.06■■□□□ 1.76
TRAPPC3-202ENST00000373162 PMFBP1Q8TBY8 1022 aa26.05■■□□□ 1.76
TRAPPC3-202ENST00000373162 QTRT2Q9H974 415 aaKnown RBP26.04■■□□□ 1.76
TRAPPC3-202ENST00000373162 RBM6P78332 1123 aaKnown RBP26.03■■□□□ 1.76
TRAPPC3-202ENST00000373162 PSME1Q06323 249 aa26.03■■□□□ 1.76
TRAPPC3-202ENST00000373162 ARHGEF10O15013 1369 aa26.03■■□□□ 1.76
TRAPPC3-202ENST00000373162 QRICH2Q9H0J4 1663 aa26.03■■□□□ 1.76
TRAPPC3-202ENST00000373162 USP21Q9UK80 565 aa26.01■■□□□ 1.75
TRAPPC3-202ENST00000373162 PLCH1Q4KWH8 1693 aa25.99■■□□□ 1.75
TRAPPC3-202ENST00000373162 POLR3AO14802 1390 aaPredicted RBP25.99■■□□□ 1.75
TRAPPC3-202ENST00000373162 NUDT16Q96DE0 195 aaKnown RBP25.99■■□□□ 1.75
TRAPPC3-202ENST00000373162 GPRASP1Q5JY77 1395 aa25.98■■□□□ 1.75
TRAPPC3-202ENST00000373162 NWD2Q9ULI1 1742 aa25.98■■□□□ 1.75
TRAPPC3-202ENST00000373162 UPF1Q92900 1129 aaKnown RBP eCLIP25.98■■□□□ 1.75
TRAPPC3-202ENST00000373162 CDK19Q9BWU1 502 aa25.97■■□□□ 1.75
TRAPPC3-202ENST00000373162 TRPC5Q9UL62 973 aaPredicted RBP25.97■■□□□ 1.75
TRAPPC3-202ENST00000373162 CENPJQ9HC77 1338 aaPredicted RBP25.96■■□□□ 1.75
TRAPPC3-202ENST00000373162 GLI3P10071 1580 aa25.96■■□□□ 1.75
TRAPPC3-202ENST00000373162 TRIM26Q12899 539 aaPredicted RBP25.95■■□□□ 1.74
TRAPPC3-202ENST00000373162 CABLES1Q8TDN4 633 aa25.95■■□□□ 1.74
TRAPPC3-202ENST00000373162 NRAPQ86VF7 1730 aa25.94■■□□□ 1.74
TRAPPC3-202ENST00000373162 PLEKHG3A1L390 1219 aa25.93■■□□□ 1.74
TRAPPC3-202ENST00000373162 NEUROD1Q13562 356 aa25.93■■□□□ 1.74
TRAPPC3-202ENST00000373162 NBPF8Q3BBV2 869 aa25.93■■□□□ 1.74
TRAPPC3-202ENST00000373162 CCDC61Q9Y6R9 512 aa25.91■■□□□ 1.74
TRAPPC3-202ENST00000373162 PHRF1Q9P1Y6 1649 aaKnown RBP25.91■■□□□ 1.74
TRAPPC3-202ENST00000373162 UNC5CLQ8IV45 518 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms