RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 EVC2Q86UK5 1308 aa20.85■□□□□ 0.93
YIPF3-202ENST00000372422 NWD1Q149M9 1564 aa20.85■□□□□ 0.93
YIPF3-202ENST00000372422 DISP3Q9P2K9 1392 aa20.85■□□□□ 0.93
YIPF3-202ENST00000372422 PLEKHH1Q9ULM0 1364 aa20.85■□□□□ 0.93
YIPF3-202ENST00000372422 MINK1Q8N4C8 1332 aaPredicted RBP20.84■□□□□ 0.93
YIPF3-202ENST00000372422 POLR3GLQ9BT43 218 aa20.84■□□□□ 0.93
YIPF3-202ENST00000372422 NKTRP30414 1462 aaKnown RBP20.82■□□□□ 0.92
YIPF3-202ENST00000372422 PUS7Q96PZ0 661 aaKnown RBP20.8■□□□□ 0.92
YIPF3-202ENST00000372422 DIEXFQ68CQ4 756 aaKnown RBP20.79■□□□□ 0.92
YIPF3-202ENST00000372422 TULP4Q9NRJ4 1543 aa20.78■□□□□ 0.92
YIPF3-202ENST00000372422 SRPK2P78362 688 aaKnown RBP20.77■□□□□ 0.92
YIPF3-202ENST00000372422 DDX10Q13206 875 aaKnown RBP20.77■□□□□ 0.92
YIPF3-202ENST00000372422 PROSER2Q86WR7 435 aaPredicted RBP20.76■□□□□ 0.91
YIPF3-202ENST00000372422 ADGRB2O60241 1585 aa20.76■□□□□ 0.91
YIPF3-202ENST00000372422 WASLO00401 505 aaPredicted RBP20.76■□□□□ 0.91
YIPF3-202ENST00000372422 CDK19Q9BWU1 502 aa20.75■□□□□ 0.91
YIPF3-202ENST00000372422 ATAD2Q6PL18 1390 aa20.74■□□□□ 0.91
YIPF3-202ENST00000372422 C14orf37Q86TY3 774 aa20.74■□□□□ 0.91
YIPF3-202ENST00000372422 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.74■□□□□ 0.91
YIPF3-202ENST00000372422 CABP2Q9NPB3 220 aa20.72■□□□□ 0.91
YIPF3-202ENST00000372422 NCOA3Q9Y6Q9 1424 aa20.72■□□□□ 0.91
YIPF3-202ENST00000372422 ZNF335Q9H4Z2 1342 aaPredicted RBP20.71■□□□□ 0.91
YIPF3-202ENST00000372422 ADGRL3Q9HAR2 1447 aa20.71■□□□□ 0.91
YIPF3-202ENST00000372422 NINLQ9Y2I6 1382 aa20.7■□□□□ 0.9
YIPF3-202ENST00000372422 STRCP1A6NGW2 1772 aa20.7■□□□□ 0.9
YIPF3-202ENST00000372422 TMEM94Q12767 1356 aa20.69■□□□□ 0.9
YIPF3-202ENST00000372422 TMC1Q8TDI8 760 aa20.68■□□□□ 0.9
YIPF3-202ENST00000372422 CDC42BPGQ6DT37 1551 aa20.68■□□□□ 0.9
YIPF3-202ENST00000372422 RBM33Q96EV2 1170 aaKnown RBP20.68■□□□□ 0.9
YIPF3-202ENST00000372422 NALCNQ8IZF0 1738 aa20.67■□□□□ 0.9
YIPF3-202ENST00000372422 C19orf44Q9H6X5 657 aa20.66■□□□□ 0.9
YIPF3-202ENST00000372422 NUDT16Q96DE0 195 aaKnown RBP20.65■□□□□ 0.9
YIPF3-202ENST00000372422 CCDC61Q9Y6R9 512 aa20.64■□□□□ 0.9
YIPF3-202ENST00000372422 MYOM1P52179 1685 aa20.64■□□□□ 0.89
YIPF3-202ENST00000372422 LRRC7Q96NW7 1537 aa20.64■□□□□ 0.89
YIPF3-202ENST00000372422 ANKARQ7Z5J8 1434 aa20.64■□□□□ 0.89
YIPF3-202ENST00000372422 PANK3Q9H999 370 aa20.63■□□□□ 0.89
YIPF3-202ENST00000372422 DCCP43146 1447 aa20.63■□□□□ 0.89
YIPF3-202ENST00000372422 MSH6P52701 1360 aa20.63■□□□□ 0.89
YIPF3-202ENST00000372422 ATP7BP35670 1465 aa20.62■□□□□ 0.89
YIPF3-202ENST00000372422 SLC12A5Q9H2X9 1139 aa20.62■□□□□ 0.89
YIPF3-202ENST00000372422 ATF3P18847 181 aa20.61■□□□□ 0.89
YIPF3-202ENST00000372422 TERF2IPQ9NYB0 399 aa20.61■□□□□ 0.89
YIPF3-202ENST00000372422 FMN2Q9NZ56 1722 aa20.61■□□□□ 0.89
YIPF3-202ENST00000372422 PPIP5K1Q6PFW1 1433 aa20.61■□□□□ 0.89
YIPF3-202ENST00000372422 CABP1Q9NZU7 370 aa20.6■□□□□ 0.89
YIPF3-202ENST00000372422 ANKRD36BQ8N2N9 1353 aa20.6■□□□□ 0.89
YIPF3-202ENST00000372422 NUTM2FA1L443 756 aa20.59■□□□□ 0.89
YIPF3-202ENST00000372422 HDGFL2Q7Z4V5 671 aaPredicted RBP20.59■□□□□ 0.89
YIPF3-202ENST00000372422 CADPS2Q86UW7 1296 aa20.59■□□□□ 0.89
YIPF3-202ENST00000372422 PRR36Q9H6K5 1346 aa20.59■□□□□ 0.89
YIPF3-202ENST00000372422 ITSN1Q15811 1721 aa20.57■□□□□ 0.88
YIPF3-202ENST00000372422 KNSTRNQ9Y448 316 aa20.57■□□□□ 0.88
YIPF3-202ENST00000372422 TOPAZ1Q8N9V7 1692 aa20.56■□□□□ 0.88
YIPF3-202ENST00000372422 PLEKHG3A1L390 1219 aa20.55■□□□□ 0.88
YIPF3-202ENST00000372422 ANP32CO43423 234 aa20.55■□□□□ 0.88
YIPF3-202ENST00000372422 USP32Q8NFA0 1604 aa20.55■□□□□ 0.88
YIPF3-202ENST00000372422 LTBP4Q8N2S1 1624 aa20.54■□□□□ 0.88
YIPF3-202ENST00000372422 A0A1W2PP64 1363 aa20.54■□□□□ 0.88
YIPF3-202ENST00000372422 PER1O15534 1290 aaPredicted RBP20.54■□□□□ 0.88
YIPF3-202ENST00000372422 ZNF692Q9BU19 519 aaPredicted RBP20.54■□□□□ 0.88
YIPF3-202ENST00000372422 XIRP1Q702N8 1843 aaKnown RBP20.54■□□□□ 0.88
YIPF3-202ENST00000372422 NSD3Q9BZ95 1437 aa20.51■□□□□ 0.87
YIPF3-202ENST00000372422 CD163L1Q9NR16 1453 aa20.51■□□□□ 0.87
YIPF3-202ENST00000372422 CPSF1Q10570 1443 aaKnown RBP20.51■□□□□ 0.87
YIPF3-202ENST00000372422 ESCO1Q5FWF5 840 aa20.51■□□□□ 0.87
YIPF3-202ENST00000372422 NGDNQ8NEJ9 315 aaKnown RBP20.51■□□□□ 0.87
YIPF3-202ENST00000372422 CARD14Q9BXL6 1004 aa20.51■□□□□ 0.87
YIPF3-202ENST00000372422 C1orf167Q5SNV9 1468 aa20.5■□□□□ 0.87
YIPF3-202ENST00000372422 KTN1Q86UP2 1357 aaKnown RBP20.5■□□□□ 0.87
YIPF3-202ENST00000372422 MST1RQ04912 1400 aa20.5■□□□□ 0.87
YIPF3-202ENST00000372422 PHF8Q9UPP1 1060 aa20.5■□□□□ 0.87
YIPF3-202ENST00000372422 ACEP12821 1306 aa20.49■□□□□ 0.87
YIPF3-202ENST00000372422 PMFBP1Q8TBY8 1022 aa20.49■□□□□ 0.87
YIPF3-202ENST00000372422 POLR3AO14802 1390 aaPredicted RBP20.49■□□□□ 0.87
YIPF3-202ENST00000372422 RGPD8O14715 1765 aaPredicted RBP20.48■□□□□ 0.87
YIPF3-202ENST00000372422 CGNL1Q0VF96 1302 aa20.48■□□□□ 0.87
YIPF3-202ENST00000372422 NPC1L1Q9UHC9 1359 aa20.47■□□□□ 0.87
YIPF3-202ENST00000372422 EDC4Q6P2E9 1401 aaKnown RBP20.46■□□□□ 0.87
YIPF3-202ENST00000372422 AKAP12Q02952 1782 aa20.45■□□□□ 0.86
YIPF3-202ENST00000372422 CENPBP07199 599 aaPredicted RBP20.45■□□□□ 0.86
YIPF3-202ENST00000372422 AMER1Q5JTC6 1135 aaPredicted RBP20.45■□□□□ 0.86
YIPF3-202ENST00000372422 KIF1AQ12756 1690 aa20.45■□□□□ 0.86
YIPF3-202ENST00000372422 ORAI2Q96SN7 254 aa20.44■□□□□ 0.86
YIPF3-202ENST00000372422 SLAIN2Q9P270 581 aa20.44■□□□□ 0.86
YIPF3-202ENST00000372422 NSD2O96028 1365 aa20.44■□□□□ 0.86
YIPF3-202ENST00000372422 USP6P35125 1406 aa20.44■□□□□ 0.86
YIPF3-202ENST00000372422 MON2Q7Z3U7 1717 aa20.43■□□□□ 0.86
YIPF3-202ENST00000372422 RALBP1Q15311 655 aa20.43■□□□□ 0.86
YIPF3-202ENST00000372422 CC2D1BQ5T0F9 858 aaKnown RBP20.43■□□□□ 0.86
YIPF3-202ENST00000372422 PRKRIP1Q9H875 184 aaPredicted RBP20.43■□□□□ 0.86
YIPF3-202ENST00000372422 BRD4O60885 1362 aaPredicted RBP20.43■□□□□ 0.86
YIPF3-202ENST00000372422 CNGB1Q14028 1251 aaPredicted RBP20.42■□□□□ 0.86
YIPF3-202ENST00000372422 MIER1Q8N108 512 aa20.42■□□□□ 0.86
YIPF3-202ENST00000372422 PSME1Q06323 249 aa20.41■□□□□ 0.86
YIPF3-202ENST00000372422 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.4■□□□□ 0.86
YIPF3-202ENST00000372422 TTC21AQ8NDW8 1320 aa20.39■□□□□ 0.86
YIPF3-202ENST00000372422 TTC21BQ7Z4L5 1316 aa20.39■□□□□ 0.85
YIPF3-202ENST00000372422 IQSEC2Q5JU85 1478 aa20.38■□□□□ 0.85
YIPF3-202ENST00000372422 PARD3Q8TEW0 1356 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms