RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 PROSER2Q86WR7 435 aaPredicted RBP28.94■■■□□ 2.22
TSC22D3-205ENST00000372390 LTBP4Q8N2S1 1624 aa28.94■■■□□ 2.22
TSC22D3-205ENST00000372390 KIF7Q2M1P5 1343 aa28.91■■■□□ 2.22
TSC22D3-205ENST00000372390 LRRC7Q96NW7 1537 aa28.91■■■□□ 2.22
TSC22D3-205ENST00000372390 CCDC7Q96M83 1385 aa28.91■■■□□ 2.22
TSC22D3-205ENST00000372390 TMEM94Q12767 1356 aa28.9■■■□□ 2.22
TSC22D3-205ENST00000372390 SBNO2Q9Y2G9 1366 aa28.89■■■□□ 2.22
TSC22D3-205ENST00000372390 NCOA3Q9Y6Q9 1424 aa28.89■■■□□ 2.21
TSC22D3-205ENST00000372390 MINK1Q8N4C8 1332 aaPredicted RBP28.88■■■□□ 2.21
TSC22D3-205ENST00000372390 TMF1P82094 1093 aa28.87■■■□□ 2.21
TSC22D3-205ENST00000372390 POLR3GLQ9BT43 218 aa28.87■■■□□ 2.21
TSC22D3-205ENST00000372390 C14orf37Q86TY3 774 aa28.86■■■□□ 2.21
TSC22D3-205ENST00000372390 TULP4Q9NRJ4 1543 aa28.85■■■□□ 2.21
TSC22D3-205ENST00000372390 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.85■■■□□ 2.21
TSC22D3-205ENST00000372390 ADGRL3Q9HAR2 1447 aa28.85■■■□□ 2.21
TSC22D3-205ENST00000372390 NALCNQ8IZF0 1738 aa28.83■■■□□ 2.21
TSC22D3-205ENST00000372390 RBM33Q96EV2 1170 aaKnown RBP28.83■■■□□ 2.21
TSC22D3-205ENST00000372390 XIRP1Q702N8 1843 aaKnown RBP28.82■■■□□ 2.2
TSC22D3-205ENST00000372390 ADGRB2O60241 1585 aa28.82■■■□□ 2.2
TSC22D3-205ENST00000372390 DDX10Q13206 875 aaKnown RBP28.8■■■□□ 2.2
TSC22D3-205ENST00000372390 MSH6P52701 1360 aa28.79■■■□□ 2.2
TSC22D3-205ENST00000372390 CDC42BPGQ6DT37 1551 aa28.78■■■□□ 2.2
TSC22D3-205ENST00000372390 SLC24A1O60721 1099 aa28.77■■■□□ 2.2
TSC22D3-205ENST00000372390 DCCP43146 1447 aa28.76■■■□□ 2.19
TSC22D3-205ENST00000372390 C19orf44Q9H6X5 657 aa28.76■■■□□ 2.19
TSC22D3-205ENST00000372390 EVC2Q86UK5 1308 aa28.75■■■□□ 2.19
TSC22D3-205ENST00000372390 IQSEC2Q5JU85 1478 aa28.74■■■□□ 2.19
TSC22D3-205ENST00000372390 CABP2Q9NPB3 220 aa28.73■■■□□ 2.19
TSC22D3-205ENST00000372390 MYOM1P52179 1685 aa28.72■■■□□ 2.19
TSC22D3-205ENST00000372390 CDK19Q9BWU1 502 aa28.72■■■□□ 2.19
TSC22D3-205ENST00000372390 CDCA8Q53HL2 280 aa28.71■■■□□ 2.19
TSC22D3-205ENST00000372390 ATF3P18847 181 aa28.69■■■□□ 2.18
TSC22D3-205ENST00000372390 SRPK2P78362 688 aaKnown RBP28.69■■■□□ 2.18
TSC22D3-205ENST00000372390 WASLO00401 505 aaPredicted RBP28.69■■■□□ 2.18
TSC22D3-205ENST00000372390 CADPS2Q86UW7 1296 aa28.69■■■□□ 2.18
TSC22D3-205ENST00000372390 DIEXFQ68CQ4 756 aaKnown RBP28.67■■■□□ 2.18
TSC22D3-205ENST00000372390 CERKQ8TCT0 537 aa28.67■■■□□ 2.18
TSC22D3-205ENST00000372390 FMN2Q9NZ56 1722 aa28.67■■■□□ 2.18
TSC22D3-205ENST00000372390 ANKARQ7Z5J8 1434 aa28.62■■■□□ 2.17
TSC22D3-205ENST00000372390 PUS7Q96PZ0 661 aaKnown RBP28.62■■■□□ 2.17
TSC22D3-205ENST00000372390 NUTM2FA1L443 756 aa28.61■■■□□ 2.17
TSC22D3-205ENST00000372390 PRR36Q9H6K5 1346 aa28.6■■■□□ 2.17
TSC22D3-205ENST00000372390 MST1RQ04912 1400 aa28.6■■■□□ 2.17
TSC22D3-205ENST00000372390 SLC12A5Q9H2X9 1139 aa28.59■■■□□ 2.17
TSC22D3-205ENST00000372390 USP32Q8NFA0 1604 aa28.59■■■□□ 2.17
TSC22D3-205ENST00000372390 ATP7BP35670 1465 aa28.59■■■□□ 2.17
TSC22D3-205ENST00000372390 TMC1Q8TDI8 760 aa28.59■■■□□ 2.17
TSC22D3-205ENST00000372390 ATAD2Q6PL18 1390 aa28.58■■■□□ 2.17
TSC22D3-205ENST00000372390 RGPD8O14715 1765 aaPredicted RBP28.58■■■□□ 2.17
TSC22D3-205ENST00000372390 NUDT16Q96DE0 195 aaKnown RBP28.57■■■□□ 2.16
TSC22D3-205ENST00000372390 ITSN1Q15811 1721 aa28.56■■■□□ 2.16
TSC22D3-205ENST00000372390 PANK3Q9H999 370 aa28.56■■■□□ 2.16
TSC22D3-205ENST00000372390 C1orf167Q5SNV9 1468 aa28.56■■■□□ 2.16
TSC22D3-205ENST00000372390 TOM1O60784 492 aa28.55■■■□□ 2.16
TSC22D3-205ENST00000372390 TOPAZ1Q8N9V7 1692 aa28.53■■■□□ 2.16
TSC22D3-205ENST00000372390 SLAIN2Q9P270 581 aa28.53■■■□□ 2.16
TSC22D3-205ENST00000372390 CABP1Q9NZU7 370 aa28.52■■■□□ 2.16
TSC22D3-205ENST00000372390 CCDC61Q9Y6R9 512 aa28.51■■■□□ 2.15
TSC22D3-205ENST00000372390 PPIP5K1Q6PFW1 1433 aa28.51■■■□□ 2.15
TSC22D3-205ENST00000372390 UBAP1LF5GYI3 381 aa28.5■■■□□ 2.15
TSC22D3-205ENST00000372390 NINLQ9Y2I6 1382 aa28.49■■■□□ 2.15
TSC22D3-205ENST00000372390 CD163L1Q9NR16 1453 aa28.49■■■□□ 2.15
TSC22D3-205ENST00000372390 KIF1AQ12756 1690 aa28.47■■■□□ 2.15
TSC22D3-205ENST00000372390 PER1O15534 1290 aaPredicted RBP28.47■■■□□ 2.15
TSC22D3-205ENST00000372390 ESCO1Q5FWF5 840 aa28.47■■■□□ 2.15
TSC22D3-205ENST00000372390 CARD14Q9BXL6 1004 aa28.47■■■□□ 2.15
TSC22D3-205ENST00000372390 A0A1W2PP64 1363 aa28.45■■■□□ 2.15
TSC22D3-205ENST00000372390 ANKRD36BQ8N2N9 1353 aa28.45■■■□□ 2.14
TSC22D3-205ENST00000372390 ORAI2Q96SN7 254 aa28.43■■■□□ 2.14
TSC22D3-205ENST00000372390 PHF8Q9UPP1 1060 aa28.43■■■□□ 2.14
TSC22D3-205ENST00000372390 CNGB1Q14028 1251 aaPredicted RBP28.43■■■□□ 2.14
TSC22D3-205ENST00000372390 ROBO1Q9Y6N7 1651 aa28.42■■■□□ 2.14
TSC22D3-205ENST00000372390 BRINP3Q76B58 766 aa28.41■■■□□ 2.14
TSC22D3-205ENST00000372390 PMFBP1Q8TBY8 1022 aa28.41■■■□□ 2.14
TSC22D3-205ENST00000372390 AKAP12Q02952 1782 aa28.4■■■□□ 2.14
TSC22D3-205ENST00000372390 PLEKHG3A1L390 1219 aa28.4■■■□□ 2.14
TSC22D3-205ENST00000372390 NSD3Q9BZ95 1437 aa28.4■■■□□ 2.14
TSC22D3-205ENST00000372390 SCAF1Q9H7N4 1312 aaKnown RBP28.4■■■□□ 2.14
TSC22D3-205ENST00000372390 PIP4K2BP78356 416 aa28.39■■■□□ 2.14
TSC22D3-205ENST00000372390 CPSF1Q10570 1443 aaKnown RBP28.39■■■□□ 2.13
TSC22D3-205ENST00000372390 TERF2IPQ9NYB0 399 aa28.39■■■□□ 2.13
TSC22D3-205ENST00000372390 MIER1Q8N108 512 aa28.38■■■□□ 2.13
TSC22D3-205ENST00000372390 NGDNQ8NEJ9 315 aaKnown RBP28.37■■■□□ 2.13
TSC22D3-205ENST00000372390 ACEP12821 1306 aa28.37■■■□□ 2.13
TSC22D3-205ENST00000372390 POLR3AO14802 1390 aaPredicted RBP28.37■■■□□ 2.13
TSC22D3-205ENST00000372390 MON2Q7Z3U7 1717 aa28.36■■■□□ 2.13
TSC22D3-205ENST00000372390 HDGFL2Q7Z4V5 671 aaPredicted RBP28.36■■■□□ 2.13
TSC22D3-205ENST00000372390 KNSTRNQ9Y448 316 aa28.36■■■□□ 2.13
TSC22D3-205ENST00000372390 NPHP3Q7Z494 1330 aa28.34■■■□□ 2.13
TSC22D3-205ENST00000372390 AMER1Q5JTC6 1135 aaPredicted RBP28.34■■■□□ 2.13
TSC22D3-205ENST00000372390 KTN1Q86UP2 1357 aaKnown RBP28.34■■■□□ 2.13
TSC22D3-205ENST00000372390 NHSL1Q5SYE7 1610 aa28.33■■■□□ 2.13
TSC22D3-205ENST00000372390 FOXO3O43524 673 aa28.32■■■□□ 2.12
TSC22D3-205ENST00000372390 ANP32CO43423 234 aa28.32■■■□□ 2.12
TSC22D3-205ENST00000372390 CC2D1BQ5T0F9 858 aaKnown RBP28.32■■■□□ 2.12
TSC22D3-205ENST00000372390 ZNF692Q9BU19 519 aaPredicted RBP28.3■■■□□ 2.12
TSC22D3-205ENST00000372390 AHDC1Q5TGY3 1603 aaPredicted RBP28.3■■■□□ 2.12
TSC22D3-205ENST00000372390 NRKQ7Z2Y5 1582 aa28.29■■■□□ 2.12
TSC22D3-205ENST00000372390 PSME1Q06323 249 aa28.29■■■□□ 2.12
TSC22D3-205ENST00000372390 PRKRIP1Q9H875 184 aaPredicted RBP28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms