RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 DDX11L8A8MPP1 907 aa23.23■■□□□ 1.31
MMP9-201ENST00000372330 ZNF518AQ6AHZ1 1483 aa23.23■■□□□ 1.31
MMP9-201ENST00000372330 NEURL4Q96JN8 1562 aa23.23■■□□□ 1.31
MMP9-201ENST00000372330 GOLGA2Q08379 1002 aa23.22■■□□□ 1.31
MMP9-201ENST00000372330 CDCA8Q53HL2 280 aa23.21■■□□□ 1.31
MMP9-201ENST00000372330 UGGT1Q9NYU2 1555 aa23.21■■□□□ 1.31
MMP9-201ENST00000372330 RBM10P98175 930 aaKnown RBP23.21■■□□□ 1.31
MMP9-201ENST00000372330 CFAP74Q9C0B2 1584 aa23.2■■□□□ 1.3
MMP9-201ENST00000372330 KIAA1211Q6ZU35 1233 aa23.19■■□□□ 1.3
MMP9-201ENST00000372330 ZNF521Q96K83 1311 aa23.19■■□□□ 1.3
MMP9-201ENST00000372330 CYB5RLQ6IPT4 315 aa23.17■■□□□ 1.3
MMP9-201ENST00000372330 CGNL1Q0VF96 1302 aa23.17■■□□□ 1.3
MMP9-201ENST00000372330 KNSTRNQ9Y448 316 aa23.17■■□□□ 1.3
MMP9-201ENST00000372330 KIAA1210Q9ULL0 1709 aa23.17■■□□□ 1.3
MMP9-201ENST00000372330 SYNMO15061 1565 aa23.16■■□□□ 1.3
MMP9-201ENST00000372330 POGZQ7Z3K3 1410 aa23.16■■□□□ 1.3
MMP9-201ENST00000372330 IGHDP01880 384 aa23.16■■□□□ 1.3
MMP9-201ENST00000372330 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.3
MMP9-201ENST00000372330 MYOM2P54296 1465 aa23.14■■□□□ 1.29
MMP9-201ENST00000372330 OFD1O75665 1012 aa23.14■■□□□ 1.29
MMP9-201ENST00000372330 AAMPQ13685 434 aa23.14■■□□□ 1.29
MMP9-201ENST00000372330 ADAMTS8Q9UP79 889 aa23.14■■□□□ 1.29
MMP9-201ENST00000372330 PLEKHH1Q9ULM0 1364 aa23.13■■□□□ 1.29
MMP9-201ENST00000372330 NINLQ9Y2I6 1382 aa23.13■■□□□ 1.29
MMP9-201ENST00000372330 SLFN5Q08AF3 891 aa23.13■■□□□ 1.29
MMP9-201ENST00000372330 PDE3AQ14432 1141 aa23.13■■□□□ 1.29
MMP9-201ENST00000372330 AMER1Q5JTC6 1135 aaPredicted RBP23.13■■□□□ 1.29
MMP9-201ENST00000372330 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.13■■□□□ 1.29
MMP9-201ENST00000372330 TRMT2AQ8IZ69 625 aaKnown RBP23.13■■□□□ 1.29
MMP9-201ENST00000372330 MTERF4Q7Z6M4 381 aaKnown RBP23.12■■□□□ 1.29
MMP9-201ENST00000372330 MAP3K4Q9Y6R4 1608 aa23.12■■□□□ 1.29
MMP9-201ENST00000372330 PTMSP20962 102 aa23.11■■□□□ 1.29
MMP9-201ENST00000372330 PPRC1Q5VV67 1664 aaKnown RBP23.1■■□□□ 1.29
MMP9-201ENST00000372330 LMTK2Q8IWU2 1503 aa23.1■■□□□ 1.29
MMP9-201ENST00000372330 PPP2R1AP30153 589 aa23.1■■□□□ 1.29
MMP9-201ENST00000372330 CCDC173Q0VFZ6 552 aa23.1■■□□□ 1.29
MMP9-201ENST00000372330 SKOR2Q2VWA4 1001 aaPredicted RBP23.1■■□□□ 1.29
MMP9-201ENST00000372330 SMAP1Q8IYB5 467 aaPredicted RBP23.1■■□□□ 1.29
MMP9-201ENST00000372330 MLH3Q9UHC1 1453 aa23.09■■□□□ 1.29
MMP9-201ENST00000372330 ZSCAN30Q86W11 494 aa23.09■■□□□ 1.29
MMP9-201ENST00000372330 HECW2Q9P2P5 1572 aa23.09■■□□□ 1.29
MMP9-201ENST00000372330 SLC24A1O60721 1099 aa23.09■■□□□ 1.29
MMP9-201ENST00000372330 RAPGEF3O95398 923 aa23.09■■□□□ 1.29
MMP9-201ENST00000372330 CFAP70Q5T0N1 1121 aa23.09■■□□□ 1.29
MMP9-201ENST00000372330 CLUAP1Q96AJ1 413 aa23.09■■□□□ 1.29
MMP9-201ENST00000372330 ASXL1Q8IXJ9 1541 aa23.08■■□□□ 1.29
MMP9-201ENST00000372330 KIF1BO60333 1816 aa23.08■■□□□ 1.29
MMP9-201ENST00000372330 ADGRF5Q8IZF2 1346 aa23.08■■□□□ 1.29
MMP9-201ENST00000372330 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.28
MMP9-201ENST00000372330 PPP1R9BQ96SB3 815 aa23.08■■□□□ 1.28
MMP9-201ENST00000372330 NKTRP30414 1462 aaKnown RBP23.08■■□□□ 1.28
MMP9-201ENST00000372330 RIMBP3CA6NJZ7 1639 aa23.08■■□□□ 1.28
MMP9-201ENST00000372330 RIMBP3BA6NNM3 1639 aa23.08■■□□□ 1.28
MMP9-201ENST00000372330 RIMBP3Q9UFD9 1639 aa23.08■■□□□ 1.28
MMP9-201ENST00000372330 MROH2AA6NES4 1674 aa23.08■■□□□ 1.28
MMP9-201ENST00000372330 MYOM1P52179 1685 aa23.08■■□□□ 1.28
MMP9-201ENST00000372330 ABCA6Q8N139 1617 aa23.07■■□□□ 1.28
MMP9-201ENST00000372330 NEO1Q92859 1461 aa23.07■■□□□ 1.28
MMP9-201ENST00000372330 NPC1L1Q9UHC9 1359 aa23.07■■□□□ 1.28
MMP9-201ENST00000372330 FRMPD1Q5SYB0 1578 aa23.07■■□□□ 1.28
MMP9-201ENST00000372330 PMFBP1Q8TBY8 1022 aa23.05■■□□□ 1.28
MMP9-201ENST00000372330 IFT172Q9UG01 1749 aa23.05■■□□□ 1.28
MMP9-201ENST00000372330 KDM5AP29375 1690 aaKnown RBP23.05■■□□□ 1.28
MMP9-201ENST00000372330 RIPK4P57078 832 aa23.04■■□□□ 1.28
MMP9-201ENST00000372330 NRXN1Q9ULB1 1477 aa23.04■■□□□ 1.28
MMP9-201ENST00000372330 FGD1P98174 961 aa23.04■■□□□ 1.28
MMP9-201ENST00000372330 ANP32BQ92688 251 aaKnown RBP23.04■■□□□ 1.28
MMP9-201ENST00000372330 PIK3C2GO75747 1445 aa23.03■■□□□ 1.28
MMP9-201ENST00000372330 MSNP26038 577 aaKnown RBP23.03■■□□□ 1.28
MMP9-201ENST00000372330 GGT6Q6P531 493 aa23.02■■□□□ 1.28
MMP9-201ENST00000372330 ERVK-7P63135 1459 aa23.02■■□□□ 1.28
MMP9-201ENST00000372330 A0A0U1RQG5 324 aaPredicted RBP23.01■■□□□ 1.27
MMP9-201ENST00000372330 HS1BP3Q53T59 392 aa23■■□□□ 1.27
MMP9-201ENST00000372330 SPRYD3Q8NCJ5 442 aa23■■□□□ 1.27
MMP9-201ENST00000372330 GBP4Q96PP9 640 aa23■■□□□ 1.27
MMP9-201ENST00000372330 ADGRB3O60242 1522 aa23■■□□□ 1.27
MMP9-201ENST00000372330 CFAP65Q6ZU64 1925 aaKnown RBP23■■□□□ 1.27
MMP9-201ENST00000372330 NGEFQ8N5V2 710 aa22.99■■□□□ 1.27
MMP9-201ENST00000372330 E9PSI1 815 aa22.99■■□□□ 1.27
MMP9-201ENST00000372330 BCAR3O75815 825 aa22.99■■□□□ 1.27
MMP9-201ENST00000372330 GAS2L3Q86XJ1 694 aa22.99■■□□□ 1.27
MMP9-201ENST00000372330 CIZ1Q9ULV3 898 aaPredicted RBP22.99■■□□□ 1.27
MMP9-201ENST00000372330 SBNO2Q9Y2G9 1366 aa22.98■■□□□ 1.27
MMP9-201ENST00000372330 NPATQ14207 1427 aa22.98■■□□□ 1.27
MMP9-201ENST00000372330 ZNF692Q9BU19 519 aaPredicted RBP22.98■■□□□ 1.27
MMP9-201ENST00000372330 HSCBQ8IWL3 235 aa22.97■■□□□ 1.27
MMP9-201ENST00000372330 C22orf23Q9BZE7 217 aa22.97■■□□□ 1.27
MMP9-201ENST00000372330 RICTORQ6R327 1708 aa22.97■■□□□ 1.27
MMP9-201ENST00000372330 NOS1P29475 1434 aa22.97■■□□□ 1.27
MMP9-201ENST00000372330 FAM13BQ9NYF5 915 aa22.97■■□□□ 1.27
MMP9-201ENST00000372330 MYO3AQ8NEV4 1616 aa22.96■■□□□ 1.27
MMP9-201ENST00000372330 NCOA3Q9Y6Q9 1424 aa22.96■■□□□ 1.27
MMP9-201ENST00000372330 DDIT3P35638 169 aa22.96■■□□□ 1.27
MMP9-201ENST00000372330 GLI2P10070 1586 aa22.95■■□□□ 1.26
MMP9-201ENST00000372330 SETBP1Q9Y6X0 1596 aa22.95■■□□□ 1.26
MMP9-201ENST00000372330 UTP14CQ5TAP6 766 aaKnown RBP22.94■■□□□ 1.26
MMP9-201ENST00000372330 NCLP19338 710 aaKnown RBP22.94■■□□□ 1.26
MMP9-201ENST00000372330 IBTKQ9P2D0 1353 aaPredicted RBP22.94■■□□□ 1.26
MMP9-201ENST00000372330 DIP2CQ9Y2E4 1556 aa22.94■■□□□ 1.26
MMP9-201ENST00000372330 CHGAP10645 457 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms