RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 TMEM132EQ6IEE7 984 aa21.1■□□□□ 0.97
EDF1-202ENST00000371648 WAPLQ7Z5K2 1190 aa21.1■□□□□ 0.97
EDF1-202ENST00000371648 ADAMTS2O95450 1211 aa21.09■□□□□ 0.97
EDF1-202ENST00000371648 SOS2Q07890 1332 aaPredicted RBP21.08■□□□□ 0.97
EDF1-202ENST00000371648 ESCO1Q5FWF5 840 aa21.08■□□□□ 0.97
EDF1-202ENST00000371648 NUTM2FA1L443 756 aa21.06■□□□□ 0.96
EDF1-202ENST00000371648 LRPPRCP42704 1394 aaKnown RBP21.06■□□□□ 0.96
EDF1-202ENST00000371648 NGLY1Q96IV0 654 aa21.05■□□□□ 0.96
EDF1-202ENST00000371648 QTRT2Q9H974 415 aaKnown RBP21.04■□□□□ 0.96
EDF1-202ENST00000371648 ABCC11Q96J66 1382 aa21.03■□□□□ 0.96
EDF1-202ENST00000371648 PLEKHH1Q9ULM0 1364 aa21.03■□□□□ 0.96
EDF1-202ENST00000371648 PIK3C2GO75747 1445 aa21.03■□□□□ 0.96
EDF1-202ENST00000371648 FOXO3O43524 673 aa21.02■□□□□ 0.96
EDF1-202ENST00000371648 XPCQ01831 940 aaPredicted RBP21.02■□□□□ 0.96
EDF1-202ENST00000371648 UPF1Q92900 1129 aaKnown RBP eCLIP21.02■□□□□ 0.96
EDF1-202ENST00000371648 TECPR2O15040 1411 aa21.02■□□□□ 0.96
EDF1-202ENST00000371648 NPHP3Q7Z494 1330 aa21.02■□□□□ 0.95
EDF1-202ENST00000371648 LAMC1P11047 1609 aa21.01■□□□□ 0.95
EDF1-202ENST00000371648 IFT172Q9UG01 1749 aa21.01■□□□□ 0.95
EDF1-202ENST00000371648 C14orf93Q9H972 538 aaKnown RBP21■□□□□ 0.95
EDF1-202ENST00000371648 KDM2AQ9Y2K7 1162 aa21■□□□□ 0.95
EDF1-202ENST00000371648 CDC42BPGQ6DT37 1551 aa21■□□□□ 0.95
EDF1-202ENST00000371648 YTHDC2Q9H6S0 1430 aaKnown RBP20.99■□□□□ 0.95
EDF1-202ENST00000371648 RBM6P78332 1123 aaKnown RBP20.99■□□□□ 0.95
EDF1-202ENST00000371648 CFAP70Q5T0N1 1121 aa20.99■□□□□ 0.95
EDF1-202ENST00000371648 DCAF11Q8TEB1 546 aa20.98■□□□□ 0.95
EDF1-202ENST00000371648 CDK12Q9NYV4 1490 aaPredicted RBP20.97■□□□□ 0.95
EDF1-202ENST00000371648 USP21Q9UK80 565 aa20.97■□□□□ 0.95
EDF1-202ENST00000371648 SIRT1Q96EB6 747 aa20.95■□□□□ 0.94
EDF1-202ENST00000371648 DHX57Q6P158 1386 aaKnown RBP20.94■□□□□ 0.94
EDF1-202ENST00000371648 PXDNQ92626 1479 aa20.94■□□□□ 0.94
EDF1-202ENST00000371648 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
EDF1-202ENST00000371648 FNBP4Q8N3X1 1017 aaPredicted RBP20.93■□□□□ 0.94
EDF1-202ENST00000371648 PCGF6Q9BYE7 350 aa20.93■□□□□ 0.94
EDF1-202ENST00000371648 RGS12O14924 1447 aa20.93■□□□□ 0.94
EDF1-202ENST00000371648 KNDC1Q76NI1 1749 aa20.92■□□□□ 0.94
EDF1-202ENST00000371648 NEUROD1Q13562 356 aa20.92■□□□□ 0.94
EDF1-202ENST00000371648 NRXN1Q9ULB1 1477 aa20.92■□□□□ 0.94
EDF1-202ENST00000371648 MYOM2P54296 1465 aa20.91■□□□□ 0.94
EDF1-202ENST00000371648 PRAM1Q96QH2 718 aa20.91■□□□□ 0.94
EDF1-202ENST00000371648 TRPC5Q9UL62 973 aaPredicted RBP20.91■□□□□ 0.94
EDF1-202ENST00000371648 STAC3Q96MF2 364 aa20.9■□□□□ 0.94
EDF1-202ENST00000371648 SIN3AQ96ST3 1273 aa20.9■□□□□ 0.94
EDF1-202ENST00000371648 COL22A1Q8NFW1 1626 aaPredicted RBP20.89■□□□□ 0.94
EDF1-202ENST00000371648 KRT28Q7Z3Y7 464 aa20.89■□□□□ 0.93
EDF1-202ENST00000371648 POGKQ9P215 609 aa20.89■□□□□ 0.93
EDF1-202ENST00000371648 PHF8Q9UPP1 1060 aa20.88■□□□□ 0.93
EDF1-202ENST00000371648 FMN2Q9NZ56 1722 aa20.87■□□□□ 0.93
EDF1-202ENST00000371648 SPATA31A3Q5VYP0 1347 aa20.87■□□□□ 0.93
EDF1-202ENST00000371648 TRAK1Q9UPV9 953 aa20.85■□□□□ 0.93
EDF1-202ENST00000371648 PLEKHG5O94827 1062 aa20.84■□□□□ 0.93
EDF1-202ENST00000371648 ATRNO75882 1429 aa20.84■□□□□ 0.93
EDF1-202ENST00000371648 PSME1Q06323 249 aa20.83■□□□□ 0.93
EDF1-202ENST00000371648 BCL9LQ86UU0 1499 aa20.82■□□□□ 0.92
EDF1-202ENST00000371648 KIF1AQ12756 1690 aa20.81■□□□□ 0.92
EDF1-202ENST00000371648 HAP1P54257 671 aaPredicted RBP20.81■□□□□ 0.92
EDF1-202ENST00000371648 LMOD2Q6P5Q4 547 aa20.81■□□□□ 0.92
EDF1-202ENST00000371648 PMFBP1Q8TBY8 1022 aa20.81■□□□□ 0.92
EDF1-202ENST00000371648 HIRIP3Q9BW71 556 aaPredicted RBP20.81■□□□□ 0.92
EDF1-202ENST00000371648 CABLES1Q8TDN4 633 aa20.8■□□□□ 0.92
EDF1-202ENST00000371648 MINK1Q8N4C8 1332 aaPredicted RBP20.79■□□□□ 0.92
EDF1-202ENST00000371648 DLC1Q96QB1 1528 aa20.79■□□□□ 0.92
EDF1-202ENST00000371648 L3MBTL2Q969R5 705 aa20.79■□□□□ 0.92
EDF1-202ENST00000371648 GJD4Q96KN9 370 aaPredicted RBP20.79■□□□□ 0.92
EDF1-202ENST00000371648 ATAD2Q6PL18 1390 aa20.79■□□□□ 0.92
EDF1-202ENST00000371648 RGPD8O14715 1765 aaPredicted RBP20.78■□□□□ 0.92
EDF1-202ENST00000371648 ADGRB1O14514 1584 aa20.78■□□□□ 0.92
EDF1-202ENST00000371648 UNC5CLQ8IV45 518 aa20.77■□□□□ 0.92
EDF1-202ENST00000371648 TNS3Q68CZ2 1445 aa20.77■□□□□ 0.91
EDF1-202ENST00000371648 MARF1Q9Y4F3 1742 aaKnown RBP20.75■□□□□ 0.91
EDF1-202ENST00000371648 SBNO1A3KN83 1393 aa20.75■□□□□ 0.91
EDF1-202ENST00000371648 ANKARQ7Z5J8 1434 aa20.75■□□□□ 0.91
EDF1-202ENST00000371648 WASLO00401 505 aaPredicted RBP20.73■□□□□ 0.91
EDF1-202ENST00000371648 SLIT2O94813 1529 aa20.73■□□□□ 0.91
EDF1-202ENST00000371648 PRR36Q9H6K5 1346 aa20.72■□□□□ 0.91
EDF1-202ENST00000371648 ARHGEF10O15013 1369 aa20.72■□□□□ 0.91
EDF1-202ENST00000371648 USP32Q8NFA0 1604 aa20.71■□□□□ 0.91
EDF1-202ENST00000371648 RALGAPBQ86X10 1494 aa20.7■□□□□ 0.9
EDF1-202ENST00000371648 ADGRB2O60241 1585 aa20.7■□□□□ 0.9
EDF1-202ENST00000371648 EIF3AQ14152 1382 aaKnown RBP20.7■□□□□ 0.9
EDF1-202ENST00000371648 TONSLQ96HA7 1378 aa20.7■□□□□ 0.9
EDF1-202ENST00000371648 CCDC9Q9Y3X0 531 aaKnown RBP20.69■□□□□ 0.9
EDF1-202ENST00000371648 GPRASP1Q5JY77 1395 aa20.69■□□□□ 0.9
EDF1-202ENST00000371648 FAM83GA6ND36 823 aa20.68■□□□□ 0.9
EDF1-202ENST00000371648 NBPF1Q3BBV0 1214 aa20.68■□□□□ 0.9
EDF1-202ENST00000371648 NGDNQ8NEJ9 315 aaKnown RBP20.68■□□□□ 0.9
EDF1-202ENST00000371648 VPS72Q15906 364 aa20.67■□□□□ 0.9
EDF1-202ENST00000371648 TULP4Q9NRJ4 1543 aa20.66■□□□□ 0.9
EDF1-202ENST00000371648 GLI3P10071 1580 aa20.66■□□□□ 0.9
EDF1-202ENST00000371648 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.66■□□□□ 0.9
EDF1-202ENST00000371648 PAK3O75914 559 aaPredicted RBP20.65■□□□□ 0.9
EDF1-202ENST00000371648 CCDC125Q86Z20 511 aa20.64■□□□□ 0.89
EDF1-202ENST00000371648 SEPT12Q8IYM1 358 aa20.64■□□□□ 0.89
EDF1-202ENST00000371648 NUDT16Q96DE0 195 aaKnown RBP20.64■□□□□ 0.89
EDF1-202ENST00000371648 KIAA1210Q9ULL0 1709 aa20.64■□□□□ 0.89
EDF1-202ENST00000371648 EP400Q96L91 3159 aa20.63■□□□□ 0.89
EDF1-202ENST00000371648 CCER1Q8TC90 406 aaPredicted RBP20.63■□□□□ 0.89
EDF1-202ENST00000371648 CDK19Q9BWU1 502 aa20.62■□□□□ 0.89
EDF1-202ENST00000371648 BTG4Q9NY30 223 aa20.61■□□□□ 0.89
EDF1-202ENST00000371648 TRPM3Q9HCF6 1732 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms