RNA–Protein interactions for RNA: ENST00000371459.5

SUPT3H-202, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUPT3H, Length 2,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-202ENST00000371459 HMX1Q9NP08 348 aaPredicted RBP9.53□□□□□ -0.88
SUPT3H-202ENST00000371459 FUT2Q10981 343 aa9.52□□□□□ -0.88
SUPT3H-202ENST00000371459 OTUD5Q96G74 571 aa9.52□□□□□ -0.88
SUPT3H-202ENST00000371459 CFAP99D6REC4 459 aa9.52□□□□□ -0.89
SUPT3H-202ENST00000371459 GPR37L1O60883 481 aa9.52□□□□□ -0.89
SUPT3H-202ENST00000371459 CFHP08603 1231 aa9.52□□□□□ -0.89
SUPT3H-202ENST00000371459 SAMD7Q7Z3H4 446 aa9.52□□□□□ -0.89
SUPT3H-202ENST00000371459 ATP6V1AP38606 617 aa9.51□□□□□ -0.89
SUPT3H-202ENST00000371459 NECTIN2Q92692 538 aa9.51□□□□□ -0.89
SUPT3H-202ENST00000371459 C6orf229H3BNL8 230 aa9.5□□□□□ -0.89
SUPT3H-202ENST00000371459 AXIN2Q9Y2T1 843 aa9.5□□□□□ -0.89
SUPT3H-202ENST00000371459 LRRN4Q8WUT4 740 aa9.49□□□□□ -0.89
SUPT3H-202ENST00000371459 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
SUPT3H-202ENST00000371459 BHMG1C9JSJ3 638 aaPredicted RBP9.48□□□□□ -0.89
SUPT3H-202ENST00000371459 KMT5BQ4FZB7 885 aa9.48□□□□□ -0.89
SUPT3H-202ENST00000371459 HDGFL1Q5TGJ6 251 aa9.48□□□□□ -0.89
SUPT3H-202ENST00000371459 RETREG2Q8NC44 543 aa9.48□□□□□ -0.89
SUPT3H-202ENST00000371459 ZNF687Q8N1G0 1237 aa9.47□□□□□ -0.89
SUPT3H-202ENST00000371459 ADAMTS19Q8TE59 1207 aa9.47□□□□□ -0.89
SUPT3H-202ENST00000371459 TSC1Q92574 1164 aa9.47□□□□□ -0.89
SUPT3H-202ENST00000371459 KCTD17Q8N5Z5 321 aa9.47□□□□□ -0.89
SUPT3H-202ENST00000371459 PRR7Q8TB68 274 aa9.46□□□□□ -0.89
SUPT3H-202ENST00000371459 TK2O00142 265 aa9.46□□□□□ -0.9
SUPT3H-202ENST00000371459 MORN1Q5T089 497 aa9.45□□□□□ -0.9
SUPT3H-202ENST00000371459 ZFRQ96KR1 1074 aaKnown RBP9.45□□□□□ -0.9
SUPT3H-202ENST00000371459 ACTN4O43707 911 aaKnown RBP9.44□□□□□ -0.9
SUPT3H-202ENST00000371459 RETREG3Q86VR2 466 aa9.44□□□□□ -0.9
SUPT3H-202ENST00000371459 SYMPKQ92797 1274 aaKnown RBP9.44□□□□□ -0.9
SUPT3H-202ENST00000371459 ACIN1Q9UKV3 1341 aaKnown RBP9.44□□□□□ -0.9
SUPT3H-202ENST00000371459 VAC14Q08AM6 782 aa9.44□□□□□ -0.9
SUPT3H-202ENST00000371459 EPS8L1Q8TE68 723 aa9.44□□□□□ -0.9
SUPT3H-202ENST00000371459 ALG2Q9H553 416 aa9.44□□□□□ -0.9
SUPT3H-202ENST00000371459 RNF40O75150 1001 aa9.43□□□□□ -0.9
SUPT3H-202ENST00000371459 EMP3P54852 163 aa9.43□□□□□ -0.9
SUPT3H-202ENST00000371459 DESI1Q6ICB0 168 aa9.43□□□□□ -0.9
SUPT3H-202ENST00000371459 ST18O60284 1047 aa9.43□□□□□ -0.9
SUPT3H-202ENST00000371459 SOX11P35716 441 aa9.43□□□□□ -0.9
SUPT3H-202ENST00000371459 PDE4CQ08493 712 aa9.43□□□□□ -0.9
SUPT3H-202ENST00000371459 Q3C1V9 767 aa9.43□□□□□ -0.9
SUPT3H-202ENST00000371459 PBXIP1Q96AQ6 731 aa9.43□□□□□ -0.9
SUPT3H-202ENST00000371459 CFAP70Q5T0N1 1121 aa9.41□□□□□ -0.9
SUPT3H-202ENST00000371459 NR6A1Q15406 480 aa9.41□□□□□ -0.9
SUPT3H-202ENST00000371459 SLC27A5Q9Y2P5 690 aa9.41□□□□□ -0.9
SUPT3H-202ENST00000371459 PER1O15534 1290 aaPredicted RBP9.4□□□□□ -0.9
SUPT3H-202ENST00000371459 MRPL50Q8N5N7 158 aaKnown RBP9.4□□□□□ -0.9
SUPT3H-202ENST00000371459 LRCH3Q96II8 777 aa9.4□□□□□ -0.9
SUPT3H-202ENST00000371459 PRR14Q9BWN1 585 aa9.4□□□□□ -0.9
SUPT3H-202ENST00000371459 PPP1R12CQ9BZL4 782 aa9.4□□□□□ -0.9
SUPT3H-202ENST00000371459 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.91
SUPT3H-202ENST00000371459 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.39□□□□□ -0.91
SUPT3H-202ENST00000371459 CCDC9Q9Y3X0 531 aaKnown RBP9.39□□□□□ -0.91
SUPT3H-202ENST00000371459 FAM205CA6NFA0 338 aa9.38□□□□□ -0.91
SUPT3H-202ENST00000371459 PUS10Q3MIT2 529 aaKnown RBP9.38□□□□□ -0.91
SUPT3H-202ENST00000371459 LYPD8Q6UX82 237 aa9.38□□□□□ -0.91
SUPT3H-202ENST00000371459 PNMA1Q8ND90 353 aa9.38□□□□□ -0.91
SUPT3H-202ENST00000371459 MARVELD3Q96A59 401 aa9.38□□□□□ -0.91
SUPT3H-202ENST00000371459 SALL2Q9Y467 1007 aaPredicted RBP9.38□□□□□ -0.91
SUPT3H-202ENST00000371459 AEBP1Q8IUX7 1158 aa9.36□□□□□ -0.91
SUPT3H-202ENST00000371459 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.36□□□□□ -0.91
SUPT3H-202ENST00000371459 PALM3A6NDB9 673 aaPredicted RBP9.36□□□□□ -0.91
SUPT3H-202ENST00000371459 RFX1P22670 979 aa9.36□□□□□ -0.91
SUPT3H-202ENST00000371459 ADGRD1Q6QNK2 874 aa9.36□□□□□ -0.91
SUPT3H-202ENST00000371459 UCN2Q96RP3 112 aa9.36□□□□□ -0.91
SUPT3H-202ENST00000371459 USTQ9Y2C2 406 aa9.35□□□□□ -0.91
SUPT3H-202ENST00000371459 HRO43593 1189 aa9.35□□□□□ -0.91
SUPT3H-202ENST00000371459 LHX8Q68G74 356 aa9.35□□□□□ -0.91
SUPT3H-202ENST00000371459 RNF19BQ6ZMZ0 732 aa9.35□□□□□ -0.91
SUPT3H-202ENST00000371459 SEMA3FQ13275 785 aa9.34□□□□□ -0.91
SUPT3H-202ENST00000371459 BRICD5Q6PL45 260 aa9.34□□□□□ -0.91
SUPT3H-202ENST00000371459 HS3ST6Q96QI5 342 aa9.34□□□□□ -0.91
SUPT3H-202ENST00000371459 USB1Q9BQ65 265 aaKnown RBP9.34□□□□□ -0.91
SUPT3H-202ENST00000371459 LSM11P83369 360 aaKnown RBP eCLIP9.33□□□□□ -0.929e-7■■■□□ 16.4
SUPT3H-202ENST00000371459 BLOC1S3Q6QNY0 202 aa9.33□□□□□ -0.92
SUPT3H-202ENST00000371459 POTEB3A0JP26 581 aa9.33□□□□□ -0.92
SUPT3H-202ENST00000371459 EIF4G2P78344 907 aaKnown RBP eCLIP9.33□□□□□ -0.92
SUPT3H-202ENST00000371459 NR1H3Q13133 447 aa9.33□□□□□ -0.92
SUPT3H-202ENST00000371459 POTEBQ6S5H4 581 aa9.33□□□□□ -0.92
SUPT3H-202ENST00000371459 ANKK1Q8NFD2 765 aa9.33□□□□□ -0.92
SUPT3H-202ENST00000371459 TFIP11Q9UBB9 837 aaKnown RBP9.33□□□□□ -0.92
SUPT3H-202ENST00000371459 CSB-PGBD3P0DP91 1061 aa9.32□□□□□ -0.92
SUPT3H-202ENST00000371459 LMOD1P29536 600 aaPredicted RBP9.32□□□□□ -0.92
SUPT3H-202ENST00000371459 SOWAHBA6NEL2 793 aa9.32□□□□□ -0.92
SUPT3H-202ENST00000371459 PPP4CP60510 307 aa9.32□□□□□ -0.92
SUPT3H-202ENST00000371459 THAP11Q96EK4 314 aa9.32□□□□□ -0.92
SUPT3H-202ENST00000371459 F12P00748 615 aaPredicted RBP9.31□□□□□ -0.92
SUPT3H-202ENST00000371459 ZC3H4Q9UPT8 1303 aaKnown RBP9.31□□□□□ -0.92
SUPT3H-202ENST00000371459 PATL2C9JE40 543 aaKnown RBP9.3□□□□□ -0.92
SUPT3H-202ENST00000371459 FMNL1O95466 1100 aaPredicted RBP9.3□□□□□ -0.92
SUPT3H-202ENST00000371459 MAFBQ9Y5Q3 323 aaPredicted RBP9.3□□□□□ -0.92
SUPT3H-202ENST00000371459 NR1I2O75469 434 aa9.3□□□□□ -0.92
SUPT3H-202ENST00000371459 JUNDP17535 347 aa9.3□□□□□ -0.92
SUPT3H-202ENST00000371459 APLP1P51693 650 aa9.3□□□□□ -0.92
SUPT3H-202ENST00000371459 SCUBE3Q8IX30 993 aa9.3□□□□□ -0.92
SUPT3H-202ENST00000371459 FKBPLQ9UIM3 349 aa9.3□□□□□ -0.92
SUPT3H-202ENST00000371459 TSR3Q9UJK0 312 aaKnown RBP9.3□□□□□ -0.92
SUPT3H-202ENST00000371459 HPS5Q9UPZ3 1129 aa9.3□□□□□ -0.92
SUPT3H-202ENST00000371459 ATG7O95352 703 aa9.29□□□□□ -0.92
SUPT3H-202ENST00000371459 RANGAP1P46060 587 aaPredicted RBP9.29□□□□□ -0.92
SUPT3H-202ENST00000371459 PTPRNQ16849 979 aa9.29□□□□□ -0.92
SUPT3H-202ENST00000371459 GOLGA8CPA6NN73 597 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms