RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 ATF3P18847 181 aa22.66■■□□□ 1.22
PFDN4-201ENST00000371419 FBXO41Q8TF61 875 aa22.66■■□□□ 1.22
PFDN4-201ENST00000371419 NALCNQ8IZF0 1738 aa22.66■■□□□ 1.22
PFDN4-201ENST00000371419 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.66■■□□□ 1.22
PFDN4-201ENST00000371419 CADPS2Q86UW7 1296 aa22.65■■□□□ 1.22
PFDN4-201ENST00000371419 DCCP43146 1447 aa22.65■■□□□ 1.22
PFDN4-201ENST00000371419 CARD11Q9BXL7 1154 aa22.64■■□□□ 1.21
PFDN4-201ENST00000371419 ARHGEF28Q8N1W1 1705 aaKnown RBP22.64■■□□□ 1.21
PFDN4-201ENST00000371419 SAFB2Q14151 953 aaKnown RBP eCLIP22.63■■□□□ 1.21
PFDN4-201ENST00000371419 PIP4K2BP78356 416 aa22.59■■□□□ 1.21
PFDN4-201ENST00000371419 SLAIN2Q9P270 581 aa22.59■■□□□ 1.21
PFDN4-201ENST00000371419 CDC42BPGQ6DT37 1551 aa22.58■■□□□ 1.21
PFDN4-201ENST00000371419 EIF3AQ14152 1382 aaKnown RBP22.58■■□□□ 1.21
PFDN4-201ENST00000371419 CENPJQ9HC77 1338 aaPredicted RBP22.57■■□□□ 1.2
PFDN4-201ENST00000371419 MINK1Q8N4C8 1332 aaPredicted RBP22.57■■□□□ 1.2
PFDN4-201ENST00000371419 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
PFDN4-201ENST00000371419 MST1RQ04912 1400 aa22.55■■□□□ 1.2
PFDN4-201ENST00000371419 HIRIP3Q9BW71 556 aaPredicted RBP22.54■■□□□ 1.2
PFDN4-201ENST00000371419 ADGRB2O60241 1585 aa22.54■■□□□ 1.2
PFDN4-201ENST00000371419 QRICH2Q9H0J4 1663 aa22.5■■□□□ 1.19
PFDN4-201ENST00000371419 C1orf167Q5SNV9 1468 aa22.5■■□□□ 1.19
PFDN4-201ENST00000371419 WASLO00401 505 aaPredicted RBP22.49■■□□□ 1.19
PFDN4-201ENST00000371419 FMN2Q9NZ56 1722 aa22.49■■□□□ 1.19
PFDN4-201ENST00000371419 ILDR1Q86SU0 546 aaPredicted RBP22.48■■□□□ 1.19
PFDN4-201ENST00000371419 ROBO1Q9Y6N7 1651 aa22.48■■□□□ 1.19
PFDN4-201ENST00000371419 USP47Q96K76 1375 aa22.48■■□□□ 1.19
PFDN4-201ENST00000371419 NUTM2FA1L443 756 aa22.47■■□□□ 1.19
PFDN4-201ENST00000371419 BRINP3Q76B58 766 aa22.46■■□□□ 1.19
PFDN4-201ENST00000371419 CDK19Q9BWU1 502 aa22.45■■□□□ 1.18
PFDN4-201ENST00000371419 SBNO2Q9Y2G9 1366 aa22.44■■□□□ 1.18
PFDN4-201ENST00000371419 ST20-MTHFSA0A0A6YYL1 179 aa22.44■■□□□ 1.18
PFDN4-201ENST00000371419 ORAI2Q96SN7 254 aa22.44■■□□□ 1.18
PFDN4-201ENST00000371419 ANKARQ7Z5J8 1434 aa22.44■■□□□ 1.18
PFDN4-201ENST00000371419 ESCO1Q5FWF5 840 aa22.43■■□□□ 1.18
PFDN4-201ENST00000371419 TULP4Q9NRJ4 1543 aa22.43■■□□□ 1.18
PFDN4-201ENST00000371419 EVC2Q86UK5 1308 aa22.42■■□□□ 1.18
PFDN4-201ENST00000371419 HSPA1LP34931 641 aa22.4■■□□□ 1.18
PFDN4-201ENST00000371419 SRPK2P78362 688 aaKnown RBP22.4■■□□□ 1.18
PFDN4-201ENST00000371419 USP32Q8NFA0 1604 aa22.4■■□□□ 1.18
PFDN4-201ENST00000371419 PRR36Q9H6K5 1346 aa22.39■■□□□ 1.18
PFDN4-201ENST00000371419 SLC24A1O60721 1099 aa22.39■■□□□ 1.17
PFDN4-201ENST00000371419 NUDT16Q96DE0 195 aaKnown RBP22.39■■□□□ 1.17
PFDN4-201ENST00000371419 TESK2Q96S53 571 aa22.39■■□□□ 1.17
PFDN4-201ENST00000371419 EIF4G2P78344 907 aaKnown RBP eCLIP22.38■■□□□ 1.17
PFDN4-201ENST00000371419 RGPD8O14715 1765 aaPredicted RBP22.38■■□□□ 1.17
PFDN4-201ENST00000371419 ATP7BP35670 1465 aa22.37■■□□□ 1.17
PFDN4-201ENST00000371419 CABP2Q9NPB3 220 aa22.37■■□□□ 1.17
PFDN4-201ENST00000371419 PHF8Q9UPP1 1060 aa22.36■■□□□ 1.17
PFDN4-201ENST00000371419 AHDC1Q5TGY3 1603 aaPredicted RBP22.36■■□□□ 1.17
PFDN4-201ENST00000371419 KIF1AQ12756 1690 aa22.35■■□□□ 1.17
PFDN4-201ENST00000371419 CCDC61Q9Y6R9 512 aa22.34■■□□□ 1.17
PFDN4-201ENST00000371419 NHSL1Q5SYE7 1610 aa22.33■■□□□ 1.17
PFDN4-201ENST00000371419 PHLPP1O60346 1717 aa22.33■■□□□ 1.17
PFDN4-201ENST00000371419 FOXO3O43524 673 aa22.33■■□□□ 1.16
PFDN4-201ENST00000371419 HSPA5P11021 654 aaKnown RBP22.33■■□□□ 1.16
PFDN4-201ENST00000371419 DDX17Q92841 729 aaKnown RBP22.33■■□□□ 1.16
PFDN4-201ENST00000371419 NPHP3Q7Z494 1330 aa22.33■■□□□ 1.16
PFDN4-201ENST00000371419 ITSN1Q15811 1721 aa22.32■■□□□ 1.16
PFDN4-201ENST00000371419 PMFBP1Q8TBY8 1022 aa22.32■■□□□ 1.16
PFDN4-201ENST00000371419 TMF1P82094 1093 aa22.3■■□□□ 1.16
PFDN4-201ENST00000371419 TOPAZ1Q8N9V7 1692 aa22.3■■□□□ 1.16
PFDN4-201ENST00000371419 PUS7Q96PZ0 661 aaKnown RBP22.29■■□□□ 1.16
PFDN4-201ENST00000371419 ATAD2Q6PL18 1390 aa22.29■■□□□ 1.16
PFDN4-201ENST00000371419 COL16A1Q07092 1604 aaPredicted RBP22.29■■□□□ 1.16
PFDN4-201ENST00000371419 PLEKHG3A1L390 1219 aa22.28■■□□□ 1.16
PFDN4-201ENST00000371419 SOS2Q07890 1332 aaPredicted RBP22.28■■□□□ 1.16
PFDN4-201ENST00000371419 PPIP5K1Q6PFW1 1433 aa22.28■■□□□ 1.16
PFDN4-201ENST00000371419 NGDNQ8NEJ9 315 aaKnown RBP22.28■■□□□ 1.16
PFDN4-201ENST00000371419 DISP3Q9P2K9 1392 aa22.27■■□□□ 1.16
PFDN4-201ENST00000371419 XPCQ01831 940 aaPredicted RBP22.26■■□□□ 1.15
PFDN4-201ENST00000371419 PSME1Q06323 249 aa22.26■■□□□ 1.15
PFDN4-201ENST00000371419 CABP1Q9NZU7 370 aa22.26■■□□□ 1.15
PFDN4-201ENST00000371419 PXDNQ92626 1479 aa22.25■■□□□ 1.15
PFDN4-201ENST00000371419 CDCA8Q53HL2 280 aa22.25■■□□□ 1.15
PFDN4-201ENST00000371419 KRT28Q7Z3Y7 464 aa22.25■■□□□ 1.15
PFDN4-201ENST00000371419 LRRC59Q96AG4 307 aaKnown RBP22.25■■□□□ 1.15
PFDN4-201ENST00000371419 ACEP12821 1306 aa22.24■■□□□ 1.15
PFDN4-201ENST00000371419 POLR3AO14802 1390 aaPredicted RBP22.23■■□□□ 1.15
PFDN4-201ENST00000371419 JCADQ9P266 1359 aa22.22■■□□□ 1.15
PFDN4-201ENST00000371419 TMC1Q8TDI8 760 aa22.21■■□□□ 1.15
PFDN4-201ENST00000371419 SBNO1A3KN83 1393 aa22.19■■□□□ 1.14
PFDN4-201ENST00000371419 NINLQ9Y2I6 1382 aa22.18■■□□□ 1.14
PFDN4-201ENST00000371419 SPATA31A3Q5VYP0 1347 aa22.18■■□□□ 1.14
PFDN4-201ENST00000371419 SLC12A5Q9H2X9 1139 aa22.17■■□□□ 1.14
PFDN4-201ENST00000371419 ZNF692Q9BU19 519 aaPredicted RBP22.16■■□□□ 1.14
PFDN4-201ENST00000371419 PNPLA6Q8IY17 1366 aa22.15■■□□□ 1.14
PFDN4-201ENST00000371419 SHPRHQ149N8 1683 aa22.15■■□□□ 1.14
PFDN4-201ENST00000371419 TNS3Q68CZ2 1445 aa22.15■■□□□ 1.14
PFDN4-201ENST00000371419 TRPM3Q9HCF6 1732 aaPredicted RBP22.14■■□□□ 1.14
PFDN4-201ENST00000371419 CPSF1Q10570 1443 aaKnown RBP22.14■■□□□ 1.14
PFDN4-201ENST00000371419 BRD4O60885 1362 aaPredicted RBP22.14■■□□□ 1.13
PFDN4-201ENST00000371419 PAK3O75914 559 aaPredicted RBP22.14■■□□□ 1.13
PFDN4-201ENST00000371419 TERF2IPQ9NYB0 399 aa22.14■■□□□ 1.13
PFDN4-201ENST00000371419 USP6P35125 1406 aa22.14■■□□□ 1.13
PFDN4-201ENST00000371419 HDGFL2Q7Z4V5 671 aaPredicted RBP22.13■■□□□ 1.13
PFDN4-201ENST00000371419 SPATA31A6Q5VVP1 1343 aa22.13■■□□□ 1.13
PFDN4-201ENST00000371419 ARHGEF10O15013 1369 aa22.12■■□□□ 1.13
PFDN4-201ENST00000371419 C11orf95C9JLR9 678 aaPredicted RBP22.12■■□□□ 1.13
PFDN4-201ENST00000371419 LMOD2Q6P5Q4 547 aa22.12■■□□□ 1.13
PFDN4-201ENST00000371419 POLR3GLQ9BT43 218 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms