RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ABCC5O15440 1437 aa14.5□□□□□ -0.09
DEPDC1-201ENST00000370966 TULP1O00294 542 aaPredicted RBP14.5□□□□□ -0.09
DEPDC1-201ENST00000370966 EXOSC9Q06265 439 aaKnown RBP14.5□□□□□ -0.09
DEPDC1-201ENST00000370966 FOXD4L5Q5VV16 416 aaPredicted RBP14.5□□□□□ -0.09
DEPDC1-201ENST00000370966 FOXD4L4Q8WXT5 416 aaPredicted RBP14.5□□□□□ -0.09
DEPDC1-201ENST00000370966 MAGI1Q96QZ7 1491 aaPredicted RBP14.5□□□□□ -0.09
DEPDC1-201ENST00000370966 FAM184AQ8NB25 1140 aa14.5□□□□□ -0.09
DEPDC1-201ENST00000370966 ANO2Q9NQ90 1003 aa14.5□□□□□ -0.09
DEPDC1-201ENST00000370966 H3BQV1 296 aa14.49□□□□□ -0.09
DEPDC1-201ENST00000370966 CDC45O75419 566 aa14.49□□□□□ -0.09
DEPDC1-201ENST00000370966 IFFO2Q5TF58 517 aa14.49□□□□□ -0.09
DEPDC1-201ENST00000370966 NLRP6P59044 892 aa14.49□□□□□ -0.09
DEPDC1-201ENST00000370966 GAS2L2Q8NHY3 880 aa14.49□□□□□ -0.09
DEPDC1-201ENST00000370966 CCDC9Q9Y3X0 531 aaKnown RBP14.49□□□□□ -0.09
DEPDC1-201ENST00000370966 PTPN23Q9H3S7 1636 aa14.49□□□□□ -0.09
DEPDC1-201ENST00000370966 G3BP1Q13283 466 aaKnown RBP eCLIP14.49□□□□□ -0.09
DEPDC1-201ENST00000370966 RNF20Q5VTR2 975 aa14.49□□□□□ -0.09
DEPDC1-201ENST00000370966 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
DEPDC1-201ENST00000370966 GNAI3P08754 354 aa14.48□□□□□ -0.09
DEPDC1-201ENST00000370966 GTF2E1P29083 439 aaPredicted RBP14.48□□□□□ -0.09
DEPDC1-201ENST00000370966 NECTIN2Q92692 538 aa14.48□□□□□ -0.09
DEPDC1-201ENST00000370966 ERC2O15083 957 aa14.48□□□□□ -0.09
DEPDC1-201ENST00000370966 CPLX2Q6PUV4 134 aaKnown RBP14.48□□□□□ -0.09
DEPDC1-201ENST00000370966 RAPGEF4Q8WZA2 1011 aa14.47□□□□□ -0.09
DEPDC1-201ENST00000370966 NCOA1Q15788 1441 aa14.47□□□□□ -0.09
DEPDC1-201ENST00000370966 NFKBIBQ15653 356 aa14.47□□□□□ -0.09
DEPDC1-201ENST00000370966 TMX4Q9H1E5 349 aaPredicted RBP14.47□□□□□ -0.09
DEPDC1-201ENST00000370966 ANO8Q9HCE9 1232 aaPredicted RBP14.47□□□□□ -0.09
DEPDC1-201ENST00000370966 TOMM22Q9NS69 142 aa14.47□□□□□ -0.09
DEPDC1-201ENST00000370966 ATAD2Q6PL18 1390 aa14.47□□□□□ -0.09
DEPDC1-201ENST00000370966 GCC1Q96CN9 775 aa14.46□□□□□ -0.09
DEPDC1-201ENST00000370966 CAMSAP2Q08AD1 1489 aa14.46□□□□□ -0.09
DEPDC1-201ENST00000370966 PDZRN3Q9UPQ7 1066 aa14.46□□□□□ -0.09
DEPDC1-201ENST00000370966 BACH2Q9BYV9 841 aa14.46□□□□□ -0.09
DEPDC1-201ENST00000370966 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.1
DEPDC1-201ENST00000370966 TWISTNBQ3B726 338 aaPredicted RBP14.46□□□□□ -0.1
DEPDC1-201ENST00000370966 ZNF428Q96B54 188 aa14.46□□□□□ -0.1
DEPDC1-201ENST00000370966 UBTFL1P0CB47 393 aaPredicted RBP14.45□□□□□ -0.1
DEPDC1-201ENST00000370966 EVA1CP58658 441 aa14.45□□□□□ -0.1
DEPDC1-201ENST00000370966 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
DEPDC1-201ENST00000370966 FRAT2O75474 233 aaPredicted RBP14.45□□□□□ -0.1
DEPDC1-201ENST00000370966 BCAR3O75815 825 aa14.45□□□□□ -0.1
DEPDC1-201ENST00000370966 CCDC30Q5VVM6 783 aa14.44□□□□□ -0.1
DEPDC1-201ENST00000370966 TXNDC2Q86VQ3 553 aa14.44□□□□□ -0.1
DEPDC1-201ENST00000370966 CDK19Q9BWU1 502 aa14.44□□□□□ -0.1
DEPDC1-201ENST00000370966 CABP1Q9NZU7 370 aa14.44□□□□□ -0.1
DEPDC1-201ENST00000370966 RPRD2Q5VT52 1461 aaKnown RBP14.43□□□□□ -0.1
DEPDC1-201ENST00000370966 PLB1Q6P1J6 1458 aa14.43□□□□□ -0.1
DEPDC1-201ENST00000370966 C11orf95C9JLR9 678 aaPredicted RBP14.43□□□□□ -0.1
DEPDC1-201ENST00000370966 GRIN2AQ12879 1464 aa14.43□□□□□ -0.1
DEPDC1-201ENST00000370966 ATF7IPQ6VMQ6 1270 aa14.43□□□□□ -0.1
DEPDC1-201ENST00000370966 GOLGA6L19H0YKK7 550 aa14.42□□□□□ -0.1
DEPDC1-201ENST00000370966 RSPH6AQ9H0K4 717 aa14.42□□□□□ -0.1
DEPDC1-201ENST00000370966 BECN2A8MW95 431 aa14.41□□□□□ -0.1
DEPDC1-201ENST00000370966 SLFN5Q08AF3 891 aa14.41□□□□□ -0.1
DEPDC1-201ENST00000370966 TSR2Q969E8 191 aaKnown RBP14.41□□□□□ -0.1
DEPDC1-201ENST00000370966 FOXD4L6Q3SYB3 417 aaPredicted RBP14.41□□□□□ -0.1
DEPDC1-201ENST00000370966 FOXD4L3Q6VB84 417 aaPredicted RBP14.41□□□□□ -0.1
DEPDC1-201ENST00000370966 SYNE3Q6ZMZ3 975 aa14.41□□□□□ -0.1
DEPDC1-201ENST00000370966 RASSF8Q8NHQ8 419 aa14.41□□□□□ -0.1
DEPDC1-201ENST00000370966 SMC3Q9UQE7 1217 aa14.41□□□□□ -0.1
DEPDC1-201ENST00000370966 GPRASP1Q5JY77 1395 aa14.41□□□□□ -0.1
DEPDC1-201ENST00000370966 FCHSD2O94868 740 aa14.41□□□□□ -0.1
DEPDC1-201ENST00000370966 CLASRPQ8N2M8 674 aaKnown RBP14.41□□□□□ -0.1
DEPDC1-201ENST00000370966 MVPQ14764 893 aaKnown RBP14.4□□□□□ -0.1
DEPDC1-201ENST00000370966 NOB1Q9ULX3 412 aaKnown RBP14.4□□□□□ -0.1
DEPDC1-201ENST00000370966 ABTB2Q8N961 1025 aa14.4□□□□□ -0.1
DEPDC1-201ENST00000370966 RAPGEF3O95398 923 aa14.39□□□□□ -0.11
DEPDC1-201ENST00000370966 ATF3P18847 181 aa14.39□□□□□ -0.11
DEPDC1-201ENST00000370966 MCM2P49736 904 aa14.39□□□□□ -0.11
DEPDC1-201ENST00000370966 AKAP17AQ02040 695 aaKnown RBP14.39□□□□□ -0.11
DEPDC1-201ENST00000370966 RIC3Q7Z5B4 369 aa14.39□□□□□ -0.11
DEPDC1-201ENST00000370966 RTEL1-TNFRSF6BF6WH68 1400 aa14.39□□□□□ -0.11
DEPDC1-201ENST00000370966 SULT6B1Q6IMI4 303 aa14.39□□□□□ -0.11
DEPDC1-201ENST00000370966 WWC1Q8IX03 1113 aa14.39□□□□□ -0.11
DEPDC1-201ENST00000370966 THEMISQ8N1K5 641 aaPredicted RBP14.39□□□□□ -0.11
DEPDC1-201ENST00000370966 NLRP2Q9NX02 1062 aa14.38□□□□□ -0.11
DEPDC1-201ENST00000370966 CPLX1O14810 134 aa14.38□□□□□ -0.11
DEPDC1-201ENST00000370966 PLEKHO1Q53GL0 409 aaPredicted RBP14.38□□□□□ -0.11
DEPDC1-201ENST00000370966 MCTP1Q6DN14 999 aa14.38□□□□□ -0.11
DEPDC1-201ENST00000370966 TRDNQ13061 729 aa14.38□□□□□ -0.11
DEPDC1-201ENST00000370966 RABEP1Q15276 862 aa14.38□□□□□ -0.11
DEPDC1-201ENST00000370966 KIF14Q15058 1648 aa14.37□□□□□ -0.11
DEPDC1-201ENST00000370966 SURF6O75683 361 aaKnown RBP14.37□□□□□ -0.11
DEPDC1-201ENST00000370966 URB2Q14146 1524 aaKnown RBP14.37□□□□□ -0.11
DEPDC1-201ENST00000370966 VSIG10Q8N0Z9 540 aa14.37□□□□□ -0.11
DEPDC1-201ENST00000370966 GNAI2P04899 355 aa14.37□□□□□ -0.11
DEPDC1-201ENST00000370966 CNTROBQ8N137 903 aa14.37□□□□□ -0.11
DEPDC1-201ENST00000370966 NSD3Q9BZ95 1437 aa14.37□□□□□ -0.11
DEPDC1-201ENST00000370966 CCT4P50991 539 aaKnown RBP14.37□□□□□ -0.11
DEPDC1-201ENST00000370966 NUTM2GQ5VZR2 741 aa14.37□□□□□ -0.11
DEPDC1-201ENST00000370966 MRE11P49959 708 aa14.36□□□□□ -0.11
DEPDC1-201ENST00000370966 CCDC61Q9Y6R9 512 aa14.36□□□□□ -0.11
DEPDC1-201ENST00000370966 VPS37CA5D8V6 355 aaPredicted RBP14.36□□□□□ -0.11
DEPDC1-201ENST00000370966 TRIM29Q14134 588 aa14.36□□□□□ -0.11
DEPDC1-201ENST00000370966 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
DEPDC1-201ENST00000370966 TMPOP42166 694 aaKnown RBP14.35□□□□□ -0.11
DEPDC1-201ENST00000370966 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.34□□□□□ -0.11
DEPDC1-201ENST00000370966 G3V3G9 751 aa14.34□□□□□ -0.11
DEPDC1-201ENST00000370966 PSMA5P28066 241 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms