RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 SOS2Q07890 1332 aaPredicted RBP23.83■■□□□ 1.4
VMA21-202ENST00000370361 SIRT1Q96EB6 747 aa23.82■■□□□ 1.4
VMA21-202ENST00000370361 YTHDC2Q9H6S0 1430 aaKnown RBP23.8■■□□□ 1.4
VMA21-202ENST00000370361 C14orf93Q9H972 538 aaKnown RBP23.79■■□□□ 1.4
VMA21-202ENST00000370361 NPHP3Q7Z494 1330 aa23.79■■□□□ 1.4
VMA21-202ENST00000370361 NUTM2BA6NNL0 878 aaPredicted RBP23.78■■□□□ 1.4
VMA21-202ENST00000370361 NUTM2EB1AL46 878 aaPredicted RBP23.78■■□□□ 1.4
VMA21-202ENST00000370361 NUTM2AQ8IVF1 878 aaPredicted RBP23.78■■□□□ 1.4
VMA21-202ENST00000370361 STAC3Q96MF2 364 aa23.78■■□□□ 1.4
VMA21-202ENST00000370361 CDK12Q9NYV4 1490 aaPredicted RBP23.77■■□□□ 1.4
VMA21-202ENST00000370361 ORAI2Q96SN7 254 aa23.77■■□□□ 1.4
VMA21-202ENST00000370361 DHX57Q6P158 1386 aaKnown RBP23.77■■□□□ 1.4
VMA21-202ENST00000370361 STK26Q9P289 416 aa23.76■■□□□ 1.39
VMA21-202ENST00000370361 DDX17Q92841 729 aaKnown RBP23.74■■□□□ 1.39
VMA21-202ENST00000370361 COL22A1Q8NFW1 1626 aaPredicted RBP23.73■■□□□ 1.39
VMA21-202ENST00000370361 RXRBP28702 533 aa23.73■■□□□ 1.39
VMA21-202ENST00000370361 ESCO1Q5FWF5 840 aa23.73■■□□□ 1.39
VMA21-202ENST00000370361 AFF2P51816 1311 aa23.73■■□□□ 1.39
VMA21-202ENST00000370361 TMEM132EQ6IEE7 984 aa23.72■■□□□ 1.39
VMA21-202ENST00000370361 KIF1AQ12756 1690 aa23.71■■□□□ 1.39
VMA21-202ENST00000370361 WAPLQ7Z5K2 1190 aa23.71■■□□□ 1.39
VMA21-202ENST00000370361 FMN2Q9NZ56 1722 aa23.7■■□□□ 1.39
VMA21-202ENST00000370361 DLC1Q96QB1 1528 aa23.7■■□□□ 1.38
VMA21-202ENST00000370361 PXDNQ92626 1479 aa23.68■■□□□ 1.38
VMA21-202ENST00000370361 C8orf37Q96NL8 207 aa23.68■■□□□ 1.38
VMA21-202ENST00000370361 PLEKHH1Q9ULM0 1364 aa23.67■■□□□ 1.38
VMA21-202ENST00000370361 CFAP70Q5T0N1 1121 aa23.67■■□□□ 1.38
VMA21-202ENST00000370361 FOXO3O43524 673 aa23.64■■□□□ 1.37
VMA21-202ENST00000370361 RBM6P78332 1123 aaKnown RBP23.64■■□□□ 1.37
VMA21-202ENST00000370361 NGLY1Q96IV0 654 aa23.64■■□□□ 1.37
VMA21-202ENST00000370361 ADGRB2O60241 1585 aa23.62■■□□□ 1.37
VMA21-202ENST00000370361 ADAMTS2O95450 1211 aa23.62■■□□□ 1.37
VMA21-202ENST00000370361 QTRT2Q9H974 415 aaKnown RBP23.62■■□□□ 1.37
VMA21-202ENST00000370361 EIF3AQ14152 1382 aaKnown RBP23.62■■□□□ 1.37
VMA21-202ENST00000370361 ADGRB1O14514 1584 aa23.61■■□□□ 1.37
VMA21-202ENST00000370361 ANKARQ7Z5J8 1434 aa23.61■■□□□ 1.37
VMA21-202ENST00000370361 FNBP4Q8N3X1 1017 aaPredicted RBP23.6■■□□□ 1.37
VMA21-202ENST00000370361 PRAM1Q96QH2 718 aa23.6■■□□□ 1.37
VMA21-202ENST00000370361 POGKQ9P215 609 aa23.59■■□□□ 1.37
VMA21-202ENST00000370361 PSME1Q06323 249 aa23.58■■□□□ 1.37
VMA21-202ENST00000370361 DCAF11Q8TEB1 546 aa23.58■■□□□ 1.37
VMA21-202ENST00000370361 TRPC5Q9UL62 973 aaPredicted RBP23.58■■□□□ 1.37
VMA21-202ENST00000370361 MARF1Q9Y4F3 1742 aaKnown RBP23.58■■□□□ 1.37
VMA21-202ENST00000370361 NUTM2FA1L443 756 aa23.57■■□□□ 1.36
VMA21-202ENST00000370361 USP21Q9UK80 565 aa23.57■■□□□ 1.36
VMA21-202ENST00000370361 SPATA31A3Q5VYP0 1347 aa23.57■■□□□ 1.36
VMA21-202ENST00000370361 PHF8Q9UPP1 1060 aa23.56■■□□□ 1.36
VMA21-202ENST00000370361 SBNO1A3KN83 1393 aa23.54■■□□□ 1.36
VMA21-202ENST00000370361 UPF1Q92900 1129 aaKnown RBP eCLIP23.54■■□□□ 1.36
VMA21-202ENST00000370361 RGS12O14924 1447 aa23.53■■□□□ 1.36
VMA21-202ENST00000370361 KRT28Q7Z3Y7 464 aa23.53■■□□□ 1.36
VMA21-202ENST00000370361 ATRNO75882 1429 aa23.52■■□□□ 1.36
VMA21-202ENST00000370361 TNS3Q68CZ2 1445 aa23.52■■□□□ 1.36
VMA21-202ENST00000370361 XPCQ01831 940 aaPredicted RBP23.52■■□□□ 1.36
VMA21-202ENST00000370361 KDM2AQ9Y2K7 1162 aa23.52■■□□□ 1.36
VMA21-202ENST00000370361 ARHGEF10O15013 1369 aa23.52■■□□□ 1.36
VMA21-202ENST00000370361 RGPD8O14715 1765 aaPredicted RBP23.51■■□□□ 1.35
VMA21-202ENST00000370361 TRAK1Q9UPV9 953 aa23.5■■□□□ 1.35
VMA21-202ENST00000370361 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.5■■□□□ 1.35
VMA21-202ENST00000370361 SAFB2Q14151 953 aaKnown RBP eCLIP23.49■■□□□ 1.35
VMA21-202ENST00000370361 TULP4Q9NRJ4 1543 aa23.49■■□□□ 1.35
VMA21-202ENST00000370361 KIAA1210Q9ULL0 1709 aa23.48■■□□□ 1.35
VMA21-202ENST00000370361 USP32Q8NFA0 1604 aa23.48■■□□□ 1.35
VMA21-202ENST00000370361 BCL9LQ86UU0 1499 aa23.47■■□□□ 1.35
VMA21-202ENST00000370361 GPRASP1Q5JY77 1395 aa23.45■■□□□ 1.34
VMA21-202ENST00000370361 ATAD2Q6PL18 1390 aa23.45■■□□□ 1.34
VMA21-202ENST00000370361 ARHGEF28Q8N1W1 1705 aaKnown RBP23.45■■□□□ 1.34
VMA21-202ENST00000370361 SLIT2O94813 1529 aa23.44■■□□□ 1.34
VMA21-202ENST00000370361 WASLO00401 505 aaPredicted RBP23.44■■□□□ 1.34
VMA21-202ENST00000370361 HAP1P54257 671 aaPredicted RBP23.43■■□□□ 1.34
VMA21-202ENST00000370361 MINK1Q8N4C8 1332 aaPredicted RBP23.42■■□□□ 1.34
VMA21-202ENST00000370361 UNC5CLQ8IV45 518 aa23.42■■□□□ 1.34
VMA21-202ENST00000370361 ITSN1Q15811 1721 aa23.42■■□□□ 1.34
VMA21-202ENST00000370361 NWD2Q9ULI1 1742 aa23.4■■□□□ 1.34
VMA21-202ENST00000370361 GJD4Q96KN9 370 aaPredicted RBP23.4■■□□□ 1.34
VMA21-202ENST00000370361 HIRIP3Q9BW71 556 aaPredicted RBP23.4■■□□□ 1.34
VMA21-202ENST00000370361 ABCA3Q99758 1704 aa23.39■■□□□ 1.33
VMA21-202ENST00000370361 TRPM3Q9HCF6 1732 aaPredicted RBP23.39■■□□□ 1.33
VMA21-202ENST00000370361 PMFBP1Q8TBY8 1022 aa23.38■■□□□ 1.33
VMA21-202ENST00000370361 LMOD2Q6P5Q4 547 aa23.36■■□□□ 1.33
VMA21-202ENST00000370361 PRR36Q9H6K5 1346 aa23.35■■□□□ 1.33
VMA21-202ENST00000370361 ALS2Q96Q42 1657 aa23.35■■□□□ 1.33
VMA21-202ENST00000370361 CCDC125Q86Z20 511 aa23.34■■□□□ 1.33
VMA21-202ENST00000370361 NGDNQ8NEJ9 315 aaKnown RBP23.34■■□□□ 1.33
VMA21-202ENST00000370361 ATP7BP35670 1465 aa23.34■■□□□ 1.33
VMA21-202ENST00000370361 PLCH1Q4KWH8 1693 aa23.33■■□□□ 1.33
VMA21-202ENST00000370361 RALGAPBQ86X10 1494 aa23.33■■□□□ 1.33
VMA21-202ENST00000370361 VPS72Q15906 364 aa23.32■■□□□ 1.32
VMA21-202ENST00000370361 NUDT16Q96DE0 195 aaKnown RBP23.31■■□□□ 1.32
VMA21-202ENST00000370361 GLI3P10071 1580 aa23.31■■□□□ 1.32
VMA21-202ENST00000370361 CABLES1Q8TDN4 633 aa23.3■■□□□ 1.32
VMA21-202ENST00000370361 COL14A1Q05707 1796 aaKnown RBP23.28■■□□□ 1.32
VMA21-202ENST00000370361 CCDC61Q9Y6R9 512 aa23.28■■□□□ 1.32
VMA21-202ENST00000370361 TOPAZ1Q8N9V7 1692 aa23.28■■□□□ 1.32
VMA21-202ENST00000370361 POLR3AO14802 1390 aaPredicted RBP23.27■■□□□ 1.32
VMA21-202ENST00000370361 CDK19Q9BWU1 502 aa23.27■■□□□ 1.32
VMA21-202ENST00000370361 ONECUT3O60422 494 aaPredicted RBP23.25■■□□□ 1.31
VMA21-202ENST00000370361 CENPJQ9HC77 1338 aaPredicted RBP23.25■■□□□ 1.31
VMA21-202ENST00000370361 CRYBG1Q9Y4K1 1723 aa23.25■■□□□ 1.31
VMA21-202ENST00000370361 PLEKHG3A1L390 1219 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms