RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 NEK4P51957 841 aa21.75■■□□□ 1.07
CHRNA4-201ENST00000370263 K7ELQ4 463 aaPredicted RBP21.74■■□□□ 1.07
CHRNA4-201ENST00000370263 ZSCAN30Q86W11 494 aa21.74■■□□□ 1.07
CHRNA4-201ENST00000370263 NGDNQ8NEJ9 315 aaKnown RBP21.74■■□□□ 1.07
CHRNA4-201ENST00000370263 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.74■■□□□ 1.07
CHRNA4-201ENST00000370263 NINLQ9Y2I6 1382 aa21.73■■□□□ 1.07
CHRNA4-201ENST00000370263 PATL2C9JE40 543 aaKnown RBP21.73■■□□□ 1.07
CHRNA4-201ENST00000370263 C9orf78Q9NZ63 289 aaPredicted RBP21.73■■□□□ 1.07
CHRNA4-201ENST00000370263 CCDC9Q9Y3X0 531 aaKnown RBP21.73■■□□□ 1.07
CHRNA4-201ENST00000370263 PCMTD1Q96MG8 357 aaPredicted RBP21.73■■□□□ 1.07
CHRNA4-201ENST00000370263 CUX1P39880 1505 aa21.73■■□□□ 1.07
CHRNA4-201ENST00000370263 HSP90AB4PQ58FF6 505 aa21.73■■□□□ 1.07
CHRNA4-201ENST00000370263 LTV1Q96GA3 475 aaPredicted RBP21.73■■□□□ 1.07
CHRNA4-201ENST00000370263 ERC2O15083 957 aa21.72■■□□□ 1.07
CHRNA4-201ENST00000370263 PPP2R1AP30153 589 aa21.72■■□□□ 1.07
CHRNA4-201ENST00000370263 GCC1Q96CN9 775 aa21.72■■□□□ 1.07
CHRNA4-201ENST00000370263 ERCC4Q92889 916 aaPredicted RBP21.72■■□□□ 1.07
CHRNA4-201ENST00000370263 FKBP5Q13451 457 aaPredicted RBP21.71■■□□□ 1.07
CHRNA4-201ENST00000370263 TCP11L2Q8N4U5 519 aa21.71■■□□□ 1.07
CHRNA4-201ENST00000370263 BCAR3O75815 825 aa21.71■■□□□ 1.07
CHRNA4-201ENST00000370263 SDF4Q9BRK5 362 aa21.71■■□□□ 1.07
CHRNA4-201ENST00000370263 MARCH6O60337 910 aa21.7■■□□□ 1.06
CHRNA4-201ENST00000370263 CCDC184Q52MB2 194 aa21.7■■□□□ 1.06
CHRNA4-201ENST00000370263 CCP110O43303 1012 aa21.7■■□□□ 1.06
CHRNA4-201ENST00000370263 VGFO15240 615 aaPredicted RBP21.7■■□□□ 1.06
CHRNA4-201ENST00000370263 CCDC27Q2M243 656 aa21.7■■□□□ 1.06
CHRNA4-201ENST00000370263 CCDC112Q8NEF3 446 aa21.7■■□□□ 1.06
CHRNA4-201ENST00000370263 CDR1P51861 262 aa21.69■■□□□ 1.06
CHRNA4-201ENST00000370263 STAC3Q96MF2 364 aa21.69■■□□□ 1.06
CHRNA4-201ENST00000370263 SPC24Q8NBT2 197 aa21.69■■□□□ 1.06
CHRNA4-201ENST00000370263 CCDC47Q96A33 483 aaKnown RBP21.68■■□□□ 1.06
CHRNA4-201ENST00000370263 NEXNQ0ZGT2 675 aa21.68■■□□□ 1.06
CHRNA4-201ENST00000370263 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
CHRNA4-201ENST00000370263 OLFM4Q6UX06 510 aa21.67■■□□□ 1.06
CHRNA4-201ENST00000370263 LEKR1Q6ZMV7 388 aa21.67■■□□□ 1.06
CHRNA4-201ENST00000370263 G3BP1Q13283 466 aaKnown RBP eCLIP21.67■■□□□ 1.06
CHRNA4-201ENST00000370263 H0YHG0 523 aa21.67■■□□□ 1.06
CHRNA4-201ENST00000370263 PDCP20941 246 aa21.67■■□□□ 1.06
CHRNA4-201ENST00000370263 PSMA5P28066 241 aa21.67■■□□□ 1.06
CHRNA4-201ENST00000370263 FIBPO43427 364 aa21.66■■□□□ 1.06
CHRNA4-201ENST00000370263 CCDC192P0DO97 292 aa21.66■■□□□ 1.06
CHRNA4-201ENST00000370263 EIF2S2P20042 333 aaKnown RBP21.66■■□□□ 1.06
CHRNA4-201ENST00000370263 PDILTQ8N807 584 aa21.65■■□□□ 1.06
CHRNA4-201ENST00000370263 UBE2Q2Q8WVN8 375 aa21.65■■□□□ 1.06
CHRNA4-201ENST00000370263 TEFQ10587 303 aa21.65■■□□□ 1.06
CHRNA4-201ENST00000370263 TRDNQ13061 729 aa21.65■■□□□ 1.06
CHRNA4-201ENST00000370263 KINO60870 393 aaKnown RBP21.64■■□□□ 1.06
CHRNA4-201ENST00000370263 FOSBP53539 338 aa21.64■■□□□ 1.06
CHRNA4-201ENST00000370263 TAF3Q5VWG9 929 aa21.64■■□□□ 1.05
CHRNA4-201ENST00000370263 SMC2O95347 1197 aa21.63■■□□□ 1.05
CHRNA4-201ENST00000370263 NCBP3Q53F19 620 aaKnown RBP21.63■■□□□ 1.05
CHRNA4-201ENST00000370263 MINK1Q8N4C8 1332 aaPredicted RBP21.63■■□□□ 1.05
CHRNA4-201ENST00000370263 WDR33Q9C0J8 1336 aaKnown RBP21.63■■□□□ 1.05
CHRNA4-201ENST00000370263 APPP05067 770 aa21.63■■□□□ 1.05
CHRNA4-201ENST00000370263 EXOSC9Q06265 439 aaKnown RBP21.63■■□□□ 1.05
CHRNA4-201ENST00000370263 PDCL3Q9H2J4 239 aa21.63■■□□□ 1.05
CHRNA4-201ENST00000370263 NECTIN2Q92692 538 aa21.63■■□□□ 1.05
CHRNA4-201ENST00000370263 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
CHRNA4-201ENST00000370263 CALRP27797 417 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-201ENST00000370263 CNTROBQ8N137 903 aa21.62■■□□□ 1.05
CHRNA4-201ENST00000370263 DHX8Q14562 1220 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-201ENST00000370263 MPNDQ8N594 471 aa21.62■■□□□ 1.05
CHRNA4-201ENST00000370263 RDXP35241 583 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-201ENST00000370263 MTHFSP49914 203 aa21.61■■□□□ 1.05
CHRNA4-201ENST00000370263 PDCL2Q8N4E4 241 aa21.61■■□□□ 1.05
CHRNA4-201ENST00000370263 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
CHRNA4-201ENST00000370263 SAFBQ15424 915 aaKnown RBP eCLIP21.6■■□□□ 1.05
CHRNA4-201ENST00000370263 NUTM2FA1L443 756 aa21.6■■□□□ 1.05
CHRNA4-201ENST00000370263 C1orf141Q5JVX7 400 aa21.6■■□□□ 1.05
CHRNA4-201ENST00000370263 MVPQ14764 893 aaKnown RBP21.59■■□□□ 1.05
CHRNA4-201ENST00000370263 TSPYL4Q9UJ04 414 aa21.59■■□□□ 1.05
CHRNA4-201ENST00000370263 NBPF8Q3BBV2 869 aa21.58■■□□□ 1.05
CHRNA4-201ENST00000370263 NOB1Q9ULX3 412 aaKnown RBP21.58■■□□□ 1.05
CHRNA4-201ENST00000370263 DDX58O95786 925 aaKnown RBP21.58■■□□□ 1.04
CHRNA4-201ENST00000370263 HMOX1P09601 288 aa21.58■■□□□ 1.04
CHRNA4-201ENST00000370263 UBTFL1P0CB47 393 aaPredicted RBP21.58■■□□□ 1.04
CHRNA4-201ENST00000370263 IGF1RP08069 1367 aa21.58■■□□□ 1.04
CHRNA4-201ENST00000370263 CT47B1P0C2W7 299 aaPredicted RBP21.57■■□□□ 1.04
CHRNA4-201ENST00000370263 CAGE1Q8TC20 777 aa21.57■■□□□ 1.04
CHRNA4-201ENST00000370263 NFXL1Q6ZNB6 911 aa21.57■■□□□ 1.04
CHRNA4-201ENST00000370263 GNAI3P08754 354 aa21.56■■□□□ 1.04
CHRNA4-201ENST00000370263 ANKRD50Q9ULJ7 1429 aa21.56■■□□□ 1.04
CHRNA4-201ENST00000370263 C1orf115Q9H7X2 142 aa21.56■■□□□ 1.04
CHRNA4-201ENST00000370263 ZNF644Q9H582 1327 aaPredicted RBP21.56■■□□□ 1.04
CHRNA4-201ENST00000370263 AEBP1Q8IUX7 1158 aa21.56■■□□□ 1.04
CHRNA4-201ENST00000370263 JPH4Q96JJ6 628 aa21.56■■□□□ 1.04
CHRNA4-201ENST00000370263 TNMDQ9H2S6 317 aa21.56■■□□□ 1.04
CHRNA4-201ENST00000370263 NCOA2Q15596 1464 aa21.56■■□□□ 1.04
CHRNA4-201ENST00000370263 NAP1L1P55209 391 aaKnown RBP21.56■■□□□ 1.04
CHRNA4-201ENST00000370263 FYCO1Q9BQS8 1478 aa21.56■■□□□ 1.04
CHRNA4-201ENST00000370263 DCTN1Q14203 1278 aa21.55■■□□□ 1.04
CHRNA4-201ENST00000370263 CHD1LQ86WJ1 897 aa21.55■■□□□ 1.04
CHRNA4-201ENST00000370263 FMNL2Q96PY5 1086 aa21.55■■□□□ 1.04
CHRNA4-201ENST00000370263 WDR63Q8IWG1 891 aa21.55■■□□□ 1.04
CHRNA4-201ENST00000370263 RRP12Q5JTH9 1297 aaKnown RBP21.54■■□□□ 1.04
CHRNA4-201ENST00000370263 VPS53Q5VIR6 699 aa21.54■■□□□ 1.04
CHRNA4-201ENST00000370263 GGNBP2Q9H3C7 697 aa21.54■■□□□ 1.04
CHRNA4-201ENST00000370263 SMARCA4P51532 1647 aa21.54■■□□□ 1.04
CHRNA4-201ENST00000370263 RALYLQ86SE5 291 aaKnown RBP21.54■■□□□ 1.04
CHRNA4-201ENST00000370263 ATF7IPQ6VMQ6 1270 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms