RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 C14orf93Q9H972 538 aaKnown RBP29.91■■■□□ 2.38
CUEDC2-201ENST00000369937 LRP6O75581 1613 aa29.9■■■□□ 2.38
CUEDC2-201ENST00000369937 MYOM2P54296 1465 aa29.9■■■□□ 2.38
CUEDC2-201ENST00000369937 YTHDC2Q9H6S0 1430 aaKnown RBP29.89■■■□□ 2.38
CUEDC2-201ENST00000369937 DHX57Q6P158 1386 aaKnown RBP29.89■■■□□ 2.37
CUEDC2-201ENST00000369937 CFAP70Q5T0N1 1121 aa29.88■■■□□ 2.37
CUEDC2-201ENST00000369937 ZNF772Q68DY9 489 aaPredicted RBP29.88■■■□□ 2.37
CUEDC2-201ENST00000369937 ESCO1Q5FWF5 840 aa29.87■■■□□ 2.37
CUEDC2-201ENST00000369937 CDC42BPGQ6DT37 1551 aa29.86■■■□□ 2.37
CUEDC2-201ENST00000369937 NRXN1Q9ULB1 1477 aa29.86■■■□□ 2.37
CUEDC2-201ENST00000369937 LAMC1P11047 1609 aa29.85■■■□□ 2.37
CUEDC2-201ENST00000369937 KNDC1Q76NI1 1749 aa29.85■■■□□ 2.37
CUEDC2-201ENST00000369937 DCAF11Q8TEB1 546 aa29.83■■■□□ 2.37
CUEDC2-201ENST00000369937 SIRT1Q96EB6 747 aa29.83■■■□□ 2.37
CUEDC2-201ENST00000369937 PLEKHH1Q9ULM0 1364 aa29.82■■■□□ 2.36
CUEDC2-201ENST00000369937 NUTM2FA1L443 756 aa29.82■■■□□ 2.36
CUEDC2-201ENST00000369937 KDM2AQ9Y2K7 1162 aa29.82■■■□□ 2.36
CUEDC2-201ENST00000369937 PNPLA6Q8IY17 1366 aa29.81■■■□□ 2.36
CUEDC2-201ENST00000369937 SOS2Q07890 1332 aaPredicted RBP29.8■■■□□ 2.36
CUEDC2-201ENST00000369937 NPHP3Q7Z494 1330 aa29.79■■■□□ 2.36
CUEDC2-201ENST00000369937 STAC3Q96MF2 364 aa29.79■■■□□ 2.36
CUEDC2-201ENST00000369937 POGKQ9P215 609 aa29.77■■■□□ 2.36
CUEDC2-201ENST00000369937 FOXO3O43524 673 aa29.75■■■□□ 2.35
CUEDC2-201ENST00000369937 C8orf37Q96NL8 207 aa29.75■■■□□ 2.35
CUEDC2-201ENST00000369937 PRAM1Q96QH2 718 aa29.75■■■□□ 2.35
CUEDC2-201ENST00000369937 SAFB2Q14151 953 aaKnown RBP eCLIP29.73■■■□□ 2.35
CUEDC2-201ENST00000369937 AFF2P51816 1311 aa29.72■■■□□ 2.35
CUEDC2-201ENST00000369937 ADAMTS2O95450 1211 aa29.71■■■□□ 2.35
CUEDC2-201ENST00000369937 RXRBP28702 533 aa29.7■■■□□ 2.35
CUEDC2-201ENST00000369937 XPCQ01831 940 aaPredicted RBP29.69■■■□□ 2.34
CUEDC2-201ENST00000369937 NGLY1Q96IV0 654 aa29.69■■■□□ 2.34
CUEDC2-201ENST00000369937 TRAK1Q9UPV9 953 aa29.69■■■□□ 2.34
CUEDC2-201ENST00000369937 FMN2Q9NZ56 1722 aa29.68■■■□□ 2.34
CUEDC2-201ENST00000369937 DLC1Q96QB1 1528 aa29.67■■■□□ 2.34
CUEDC2-201ENST00000369937 PXDNQ92626 1479 aa29.64■■■□□ 2.34
CUEDC2-201ENST00000369937 ADGRB1O14514 1584 aa29.64■■■□□ 2.33
CUEDC2-201ENST00000369937 KIF1AQ12756 1690 aa29.63■■■□□ 2.33
CUEDC2-201ENST00000369937 PHF8Q9UPP1 1060 aa29.62■■■□□ 2.33
CUEDC2-201ENST00000369937 QTRT2Q9H974 415 aaKnown RBP29.61■■■□□ 2.33
CUEDC2-201ENST00000369937 PSME1Q06323 249 aa29.6■■■□□ 2.33
CUEDC2-201ENST00000369937 KRT28Q7Z3Y7 464 aa29.6■■■□□ 2.33
CUEDC2-201ENST00000369937 COL22A1Q8NFW1 1626 aaPredicted RBP29.59■■■□□ 2.33
CUEDC2-201ENST00000369937 MINK1Q8N4C8 1332 aaPredicted RBP29.58■■■□□ 2.33
CUEDC2-201ENST00000369937 HIRIP3Q9BW71 556 aaPredicted RBP29.58■■■□□ 2.33
CUEDC2-201ENST00000369937 USP21Q9UK80 565 aa29.56■■■□□ 2.32
CUEDC2-201ENST00000369937 EIF3AQ14152 1382 aaKnown RBP29.55■■■□□ 2.32
CUEDC2-201ENST00000369937 SPATA31A3Q5VYP0 1347 aa29.55■■■□□ 2.32
CUEDC2-201ENST00000369937 RBM6P78332 1123 aaKnown RBP29.55■■■□□ 2.32
CUEDC2-201ENST00000369937 ANKARQ7Z5J8 1434 aa29.54■■■□□ 2.32
CUEDC2-201ENST00000369937 RGPD8O14715 1765 aaPredicted RBP29.53■■■□□ 2.32
CUEDC2-201ENST00000369937 ADGRB2O60241 1585 aa29.52■■■□□ 2.32
CUEDC2-201ENST00000369937 HAP1P54257 671 aaPredicted RBP29.52■■■□□ 2.32
CUEDC2-201ENST00000369937 PMFBP1Q8TBY8 1022 aa29.52■■■□□ 2.32
CUEDC2-201ENST00000369937 CDK12Q9NYV4 1490 aaPredicted RBP29.52■■■□□ 2.32
CUEDC2-201ENST00000369937 LMOD2Q6P5Q4 547 aa29.5■■■□□ 2.31
CUEDC2-201ENST00000369937 FNBP4Q8N3X1 1017 aaPredicted RBP29.5■■■□□ 2.31
CUEDC2-201ENST00000369937 TRPC5Q9UL62 973 aaPredicted RBP29.5■■■□□ 2.31
CUEDC2-201ENST00000369937 WASLO00401 505 aaPredicted RBP29.49■■■□□ 2.31
CUEDC2-201ENST00000369937 TNS3Q68CZ2 1445 aa29.46■■■□□ 2.31
CUEDC2-201ENST00000369937 SBNO1A3KN83 1393 aa29.45■■■□□ 2.31
CUEDC2-201ENST00000369937 GPRASP1Q5JY77 1395 aa29.44■■■□□ 2.3
CUEDC2-201ENST00000369937 PLEKHG5O94827 1062 aa29.44■■■□□ 2.3
CUEDC2-201ENST00000369937 USP32Q8NFA0 1604 aa29.44■■■□□ 2.3
CUEDC2-201ENST00000369937 TULP4Q9NRJ4 1543 aa29.44■■■□□ 2.3
CUEDC2-201ENST00000369937 ARHGEF10O15013 1369 aa29.43■■■□□ 2.3
CUEDC2-201ENST00000369937 ARHGEF28Q8N1W1 1705 aaKnown RBP29.42■■■□□ 2.3
CUEDC2-201ENST00000369937 KIAA1210Q9ULL0 1709 aa29.42■■■□□ 2.3
CUEDC2-201ENST00000369937 NGDNQ8NEJ9 315 aaKnown RBP29.41■■■□□ 2.3
CUEDC2-201ENST00000369937 MARF1Q9Y4F3 1742 aaKnown RBP29.41■■■□□ 2.3
CUEDC2-201ENST00000369937 RGS12O14924 1447 aa29.4■■■□□ 2.3
CUEDC2-201ENST00000369937 PRR36Q9H6K5 1346 aa29.4■■■□□ 2.3
CUEDC2-201ENST00000369937 UPF1Q92900 1129 aaKnown RBP eCLIP29.39■■■□□ 2.3
CUEDC2-201ENST00000369937 NEUROD1Q13562 356 aa29.38■■■□□ 2.29
CUEDC2-201ENST00000369937 NBPF1Q3BBV0 1214 aa29.38■■■□□ 2.29
CUEDC2-201ENST00000369937 CABLES1Q8TDN4 633 aa29.38■■■□□ 2.29
CUEDC2-201ENST00000369937 L3MBTL2Q969R5 705 aa29.37■■■□□ 2.29
CUEDC2-201ENST00000369937 ATRNO75882 1429 aa29.37■■■□□ 2.29
CUEDC2-201ENST00000369937 NUDT16Q96DE0 195 aaKnown RBP29.36■■■□□ 2.29
CUEDC2-201ENST00000369937 SIN3AQ96ST3 1273 aa29.36■■■□□ 2.29
CUEDC2-201ENST00000369937 CDK19Q9BWU1 502 aa29.36■■■□□ 2.29
CUEDC2-201ENST00000369937 BCL9LQ86UU0 1499 aa29.36■■■□□ 2.29
CUEDC2-201ENST00000369937 PAK3O75914 559 aaPredicted RBP29.34■■■□□ 2.29
CUEDC2-201ENST00000369937 UNC5CLQ8IV45 518 aa29.33■■■□□ 2.29
CUEDC2-201ENST00000369937 GJD4Q96KN9 370 aaPredicted RBP29.32■■■□□ 2.28
CUEDC2-201ENST00000369937 ITSN1Q15811 1721 aa29.31■■■□□ 2.28
CUEDC2-201ENST00000369937 CENPJQ9HC77 1338 aaPredicted RBP29.29■■■□□ 2.28
CUEDC2-201ENST00000369937 SLIT2O94813 1529 aa29.29■■■□□ 2.28
CUEDC2-201ENST00000369937 ATP7BP35670 1465 aa29.29■■■□□ 2.28
CUEDC2-201ENST00000369937 CCDC61Q9Y6R9 512 aa29.27■■■□□ 2.28
CUEDC2-201ENST00000369937 ATAD2Q6PL18 1390 aa29.26■■■□□ 2.28
CUEDC2-201ENST00000369937 TRPM3Q9HCF6 1732 aaPredicted RBP29.26■■■□□ 2.27
CUEDC2-201ENST00000369937 SRPK2P78362 688 aaKnown RBP29.26■■■□□ 2.27
CUEDC2-201ENST00000369937 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.25■■■□□ 2.27
CUEDC2-201ENST00000369937 CCDC9Q9Y3X0 531 aaKnown RBP29.24■■■□□ 2.27
CUEDC2-201ENST00000369937 ABCA3Q99758 1704 aa29.22■■■□□ 2.27
CUEDC2-201ENST00000369937 ALS2Q96Q42 1657 aa29.21■■■□□ 2.27
CUEDC2-201ENST00000369937 FAM83GA6ND36 823 aa29.21■■■□□ 2.27
CUEDC2-201ENST00000369937 ACEP12821 1306 aa29.2■■■□□ 2.27
CUEDC2-201ENST00000369937 RALGAPBQ86X10 1494 aa29.2■■■□□ 2.26
CUEDC2-201ENST00000369937 ROCK2O75116 1388 aaKnown RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms