RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 QRICH2Q9H0J4 1663 aa15.23■□□□□ 0.03
BRCC3-204ENST00000369462 KNDC1Q76NI1 1749 aa15.23■□□□□ 0.03
BRCC3-204ENST00000369462 CHD2O14647 1828 aaKnown RBP15.23■□□□□ 0.03
BRCC3-204ENST00000369462 PTCH1Q13635 1447 aa15.22■□□□□ 0.03
BRCC3-204ENST00000369462 DDX10Q13206 875 aaKnown RBP15.22■□□□□ 0.03
BRCC3-204ENST00000369462 XRN1Q8IZH2 1706 aaKnown RBP15.22■□□□□ 0.03
BRCC3-204ENST00000369462 RTN4Q9NQC3 1192 aaKnown RBP15.21■□□□□ 0.03
BRCC3-204ENST00000369462 RBM33Q96EV2 1170 aaKnown RBP15.21■□□□□ 0.03
BRCC3-204ENST00000369462 EVC2Q86UK5 1308 aa15.21■□□□□ 0.03
BRCC3-204ENST00000369462 CDCA8Q53HL2 280 aa15.21■□□□□ 0.02
BRCC3-204ENST00000369462 SRPK2P78362 688 aaKnown RBP15.18■□□□□ 0.02
BRCC3-204ENST00000369462 PROSER2Q86WR7 435 aaPredicted RBP15.18■□□□□ 0.02
BRCC3-204ENST00000369462 ZNF335Q9H4Z2 1342 aaPredicted RBP15.18■□□□□ 0.02
BRCC3-204ENST00000369462 CABP2Q9NPB3 220 aa15.18■□□□□ 0.02
BRCC3-204ENST00000369462 CDK19Q9BWU1 502 aa15.17■□□□□ 0.02
BRCC3-204ENST00000369462 TULP4Q9NRJ4 1543 aa15.17■□□□□ 0.02
BRCC3-204ENST00000369462 NWD1Q149M9 1564 aa15.17■□□□□ 0.02
BRCC3-204ENST00000369462 WASLO00401 505 aaPredicted RBP15.16■□□□□ 0.02
BRCC3-204ENST00000369462 DIEXFQ68CQ4 756 aaKnown RBP15.16■□□□□ 0.02
BRCC3-204ENST00000369462 C14orf37Q86TY3 774 aa15.16■□□□□ 0.02
BRCC3-204ENST00000369462 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.15■□□□□ 0.02
BRCC3-204ENST00000369462 NKTRP30414 1462 aaKnown RBP15.14■□□□□ 0.02
BRCC3-204ENST00000369462 STRCP1A6NGW2 1772 aa15.13■□□□□ 0.01
BRCC3-204ENST00000369462 TMC1Q8TDI8 760 aa15.13■□□□□ 0.01
BRCC3-204ENST00000369462 PUS7Q96PZ0 661 aaKnown RBP15.13■□□□□ 0.01
BRCC3-204ENST00000369462 NUTM2FA1L443 756 aa15.12■□□□□ 0.01
BRCC3-204ENST00000369462 TMEM94Q12767 1356 aa15.12■□□□□ 0.01
BRCC3-204ENST00000369462 SLC12A5Q9H2X9 1139 aa15.11■□□□□ 0.01
BRCC3-204ENST00000369462 ATAD2Q6PL18 1390 aa15.1■□□□□ 0.01
BRCC3-204ENST00000369462 ADGRL3Q9HAR2 1447 aa15.1■□□□□ 0.01
BRCC3-204ENST00000369462 NUDT16Q96DE0 195 aaKnown RBP15.1■□□□□ 0.01
BRCC3-204ENST00000369462 ADGRB2O60241 1585 aa15.1■□□□□ 0.01
BRCC3-204ENST00000369462 PANK3Q9H999 370 aa15.09■□□□□ 0.01
BRCC3-204ENST00000369462 C19orf44Q9H6X5 657 aa15.09■□□□□ 0.01
BRCC3-204ENST00000369462 PRR36Q9H6K5 1346 aa15.08■□□□□ 0.01
BRCC3-204ENST00000369462 CABP1Q9NZU7 370 aa15.08■□□□□ 0
BRCC3-204ENST00000369462 CCDC61Q9Y6R9 512 aa15.08■□□□□ 0
BRCC3-204ENST00000369462 NALCNQ8IZF0 1738 aa15.08■□□□□ 0
BRCC3-204ENST00000369462 LRRC7Q96NW7 1537 aa15.07■□□□□ 0
BRCC3-204ENST00000369462 NCOA3Q9Y6Q9 1424 aa15.06■□□□□ 0
BRCC3-204ENST00000369462 ATP7BP35670 1465 aa15.05■□□□□ 0
BRCC3-204ENST00000369462 MYOM1P52179 1685 aa15.05■□□□□ -0
BRCC3-204ENST00000369462 CDC42BPGQ6DT37 1551 aa15.05■□□□□ -0
BRCC3-204ENST00000369462 ATF3P18847 181 aa15.04■□□□□ -0
BRCC3-204ENST00000369462 PPIP5K1Q6PFW1 1433 aa15.04■□□□□ -0
BRCC3-204ENST00000369462 NINLQ9Y2I6 1382 aa15.04■□□□□ -0
BRCC3-204ENST00000369462 MSH6P52701 1360 aa15.04■□□□□ -0
BRCC3-204ENST00000369462 PER1O15534 1290 aaPredicted RBP15.03■□□□□ -0
BRCC3-204ENST00000369462 CNGB1Q14028 1251 aaPredicted RBP15.03■□□□□ -0
BRCC3-204ENST00000369462 TERF2IPQ9NYB0 399 aa15.02■□□□□ -0
BRCC3-204ENST00000369462 CARD14Q9BXL6 1004 aa15.02■□□□□ -0
BRCC3-204ENST00000369462 CADPS2Q86UW7 1296 aa15.02□□□□□ -0.01
BRCC3-204ENST00000369462 PMFBP1Q8TBY8 1022 aa15.02□□□□□ -0.01
BRCC3-204ENST00000369462 KNSTRNQ9Y448 316 aa15.02□□□□□ -0.01
BRCC3-204ENST00000369462 ANKRD36BQ8N2N9 1353 aa15.01□□□□□ -0.01
BRCC3-204ENST00000369462 ANKARQ7Z5J8 1434 aa15.01□□□□□ -0.01
BRCC3-204ENST00000369462 FMN2Q9NZ56 1722 aa15.01□□□□□ -0.01
BRCC3-204ENST00000369462 A0A1W2PP64 1363 aa15.01□□□□□ -0.01
BRCC3-204ENST00000369462 HDGFL2Q7Z4V5 671 aaPredicted RBP15.01□□□□□ -0.01
BRCC3-204ENST00000369462 USP32Q8NFA0 1604 aa15□□□□□ -0.01
BRCC3-204ENST00000369462 XIRP1Q702N8 1843 aaKnown RBP15□□□□□ -0.01
BRCC3-204ENST00000369462 PLEKHG3A1L390 1219 aa15□□□□□ -0.01
BRCC3-204ENST00000369462 DCCP43146 1447 aa15□□□□□ -0.01
BRCC3-204ENST00000369462 ESCO1Q5FWF5 840 aa15□□□□□ -0.01
BRCC3-204ENST00000369462 LTBP4Q8N2S1 1624 aa15□□□□□ -0.01
BRCC3-204ENST00000369462 CD163L1Q9NR16 1453 aa14.99□□□□□ -0.01
BRCC3-204ENST00000369462 ACEP12821 1306 aa14.99□□□□□ -0.01
BRCC3-204ENST00000369462 RGPD8O14715 1765 aaPredicted RBP14.99□□□□□ -0.01
BRCC3-204ENST00000369462 ANP32CO43423 234 aa14.98□□□□□ -0.01
BRCC3-204ENST00000369462 NGDNQ8NEJ9 315 aaKnown RBP14.98□□□□□ -0.01
BRCC3-204ENST00000369462 ORAI2Q96SN7 254 aa14.98□□□□□ -0.01
BRCC3-204ENST00000369462 NSD3Q9BZ95 1437 aa14.98□□□□□ -0.01
BRCC3-204ENST00000369462 MIER1Q8N108 512 aa14.98□□□□□ -0.01
BRCC3-204ENST00000369462 PHF8Q9UPP1 1060 aa14.98□□□□□ -0.01
BRCC3-204ENST00000369462 KTN1Q86UP2 1357 aaKnown RBP14.97□□□□□ -0.01
BRCC3-204ENST00000369462 C1orf167Q5SNV9 1468 aa14.97□□□□□ -0.01
BRCC3-204ENST00000369462 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
BRCC3-204ENST00000369462 MST1RQ04912 1400 aa14.97□□□□□ -0.01
BRCC3-204ENST00000369462 CPSF1Q10570 1443 aaKnown RBP14.97□□□□□ -0.01
BRCC3-204ENST00000369462 CC2D1BQ5T0F9 858 aaKnown RBP14.96□□□□□ -0.01
BRCC3-204ENST00000369462 TOPAZ1Q8N9V7 1692 aa14.96□□□□□ -0.01
BRCC3-204ENST00000369462 AMER1Q5JTC6 1135 aaPredicted RBP14.96□□□□□ -0.02
BRCC3-204ENST00000369462 ITSN1Q15811 1721 aa14.95□□□□□ -0.02
BRCC3-204ENST00000369462 SLAIN2Q9P270 581 aa14.95□□□□□ -0.02
BRCC3-204ENST00000369462 ADRA2BP18089 450 aa14.94□□□□□ -0.02
BRCC3-204ENST00000369462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.94□□□□□ -0.02
BRCC3-204ENST00000369462 PRKRIP1Q9H875 184 aaPredicted RBP14.94□□□□□ -0.02
BRCC3-204ENST00000369462 POLR3AO14802 1390 aaPredicted RBP14.94□□□□□ -0.02
BRCC3-204ENST00000369462 CGNL1Q0VF96 1302 aa14.94□□□□□ -0.02
BRCC3-204ENST00000369462 FOXO3O43524 673 aa14.93□□□□□ -0.02
BRCC3-204ENST00000369462 PSME1Q06323 249 aa14.92□□□□□ -0.02
BRCC3-204ENST00000369462 USP6P35125 1406 aa14.91□□□□□ -0.02
BRCC3-204ENST00000369462 EDC4Q6P2E9 1401 aaKnown RBP14.91□□□□□ -0.02
BRCC3-204ENST00000369462 FYB1O15117 783 aa14.91□□□□□ -0.02
BRCC3-204ENST00000369462 NPC1L1Q9UHC9 1359 aa14.9□□□□□ -0.02
BRCC3-204ENST00000369462 XPCQ01831 940 aaPredicted RBP14.9□□□□□ -0.02
BRCC3-204ENST00000369462 BRINP3Q76B58 766 aa14.9□□□□□ -0.02
BRCC3-204ENST00000369462 GGNBP2Q9H3C7 697 aa14.9□□□□□ -0.02
BRCC3-204ENST00000369462 TTC21BQ7Z4L5 1316 aa14.9□□□□□ -0.02
BRCC3-204ENST00000369462 AKAP12Q02952 1782 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms