RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 SYNE3Q6ZMZ3 975 aa13.29□□□□□ -0.28
PTPRK-205ENST00000368213 MFAP1P55081 439 aaKnown RBP13.29□□□□□ -0.28
PTPRK-205ENST00000368213 FBXO31Q5XUX0 539 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-205ENST00000368213 ZNF530Q6P9A1 599 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-205ENST00000368213 TEX14Q8IWB6 1497 aa13.29□□□□□ -0.28
PTPRK-205ENST00000368213 CCDC141Q6ZP82 1450 aa13.28□□□□□ -0.28
PTPRK-205ENST00000368213 MTHFSP49914 203 aa13.28□□□□□ -0.28
PTPRK-205ENST00000368213 CUL7Q14999 1698 aa13.28□□□□□ -0.28
PTPRK-205ENST00000368213 ANKRD30BQ9BXX2 1392 aa13.28□□□□□ -0.28
PTPRK-205ENST00000368213 NOL8Q76FK4 1167 aaKnown RBP13.28□□□□□ -0.28
PTPRK-205ENST00000368213 DIAPH3Q9NSV4 1193 aa13.27□□□□□ -0.28
PTPRK-205ENST00000368213 ANKRD45Q5TZF3 282 aa13.27□□□□□ -0.28
PTPRK-205ENST00000368213 KIF14Q15058 1648 aa13.27□□□□□ -0.29
PTPRK-205ENST00000368213 DAPK1P53355 1430 aa13.27□□□□□ -0.29
PTPRK-205ENST00000368213 CCDC27Q2M243 656 aa13.27□□□□□ -0.29
PTPRK-205ENST00000368213 AMOTL2Q9Y2J4 779 aa13.27□□□□□ -0.29
PTPRK-205ENST00000368213 NEUROD6Q96NK8 337 aa13.26□□□□□ -0.29
PTPRK-205ENST00000368213 ROCK1Q13464 1354 aa13.26□□□□□ -0.29
PTPRK-205ENST00000368213 FANCAO15360 1455 aa13.26□□□□□ -0.29
PTPRK-205ENST00000368213 KCNH5Q8NCM2 988 aa13.26□□□□□ -0.29
PTPRK-205ENST00000368213 KIAA1107Q9UPP5 1409 aa13.26□□□□□ -0.29
PTPRK-205ENST00000368213 DNTTIP2Q5QJE6 756 aaKnown RBP13.26□□□□□ -0.29
PTPRK-205ENST00000368213 SLC12A5Q9H2X9 1139 aa13.26□□□□□ -0.29
PTPRK-205ENST00000368213 NBPF1Q3BBV0 1214 aa13.26□□□□□ -0.29
PTPRK-205ENST00000368213 NUDT16Q96DE0 195 aaKnown RBP13.26□□□□□ -0.29
PTPRK-205ENST00000368213 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-205ENST00000368213 KIF3AQ9Y496 699 aa13.26□□□□□ -0.29
PTPRK-205ENST00000368213 SUPT6HQ7KZ85 1726 aaKnown RBP13.25□□□□□ -0.29
PTPRK-205ENST00000368213 FYB1O15117 783 aa13.24□□□□□ -0.29
PTPRK-205ENST00000368213 PRKAR2BP31323 418 aa13.24□□□□□ -0.29
PTPRK-205ENST00000368213 SULT6B1Q6IMI4 303 aa13.24□□□□□ -0.29
PTPRK-205ENST00000368213 KIF16BQ96L93 1317 aa13.24□□□□□ -0.29
PTPRK-205ENST00000368213 CCDC30Q5VVM6 783 aa13.24□□□□□ -0.29
PTPRK-205ENST00000368213 FOXO3O43524 673 aa13.23□□□□□ -0.29
PTPRK-205ENST00000368213 LRPPRCP42704 1394 aaKnown RBP13.23□□□□□ -0.29
PTPRK-205ENST00000368213 WAPLQ7Z5K2 1190 aa13.23□□□□□ -0.29
PTPRK-205ENST00000368213 HSP90AB4PQ58FF6 505 aa13.23□□□□□ -0.29
PTPRK-205ENST00000368213 CCAR1Q8IX12 1150 aaKnown RBP13.23□□□□□ -0.29
PTPRK-205ENST00000368213 PHF8Q9UPP1 1060 aa13.23□□□□□ -0.29
PTPRK-205ENST00000368213 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
PTPRK-205ENST00000368213 RUFY2Q8WXA3 655 aa13.23□□□□□ -0.29
PTPRK-205ENST00000368213 ATAD2Q6PL18 1390 aa13.22□□□□□ -0.29
PTPRK-205ENST00000368213 CHAF1AQ13111 956 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-205ENST00000368213 KIAA2012Q0VF49 1180 aa13.22□□□□□ -0.29
PTPRK-205ENST00000368213 UBTFL1P0CB47 393 aaPredicted RBP13.21□□□□□ -0.29
PTPRK-205ENST00000368213 TRDNQ13061 729 aa13.21□□□□□ -0.29
PTPRK-205ENST00000368213 CADPS2Q86UW7 1296 aa13.21□□□□□ -0.29
PTPRK-205ENST00000368213 DRC7Q8IY82 874 aa13.21□□□□□ -0.29
PTPRK-205ENST00000368213 DDX19BQ9UMR2 479 aa13.21□□□□□ -0.29
PTPRK-205ENST00000368213 KIF7Q2M1P5 1343 aa13.21□□□□□ -0.3
PTPRK-205ENST00000368213 BICDL1Q6ZP65 573 aa13.21□□□□□ -0.3
PTPRK-205ENST00000368213 PNISRQ8TF01 805 aaKnown RBP13.21□□□□□ -0.3
PTPRK-205ENST00000368213 CHMP4CQ96CF2 233 aa13.21□□□□□ -0.3
PTPRK-205ENST00000368213 MSH6P52701 1360 aa13.21□□□□□ -0.3
PTPRK-205ENST00000368213 ASXL2Q76L83 1435 aa13.21□□□□□ -0.3
PTPRK-205ENST00000368213 CPLX2Q6PUV4 134 aaKnown RBP13.2□□□□□ -0.3
PTPRK-205ENST00000368213 COG6Q9Y2V7 657 aa13.2□□□□□ -0.3
PTPRK-205ENST00000368213 TNRQ92752 1358 aa13.2□□□□□ -0.3
PTPRK-205ENST00000368213 RRS1Q15050 365 aaKnown RBP13.2□□□□□ -0.3
PTPRK-205ENST00000368213 DZIP1LQ8IYY4 767 aaKnown RBP13.2□□□□□ -0.3
PTPRK-205ENST00000368213 ERICH2A1L162 156 aa13.2□□□□□ -0.3
PTPRK-205ENST00000368213 CNNM1Q9NRU3 951 aa13.19□□□□□ -0.3
PTPRK-205ENST00000368213 WASHC4Q2M389 1173 aa13.19□□□□□ -0.3
PTPRK-205ENST00000368213 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
PTPRK-205ENST00000368213 IDI1Q13907 227 aa13.18□□□□□ -0.3
PTPRK-205ENST00000368213 FAM184AQ8NB25 1140 aa13.18□□□□□ -0.3
PTPRK-205ENST00000368213 CAMSAP2Q08AD1 1489 aa13.18□□□□□ -0.3
PTPRK-205ENST00000368213 H3BQV1 296 aa13.18□□□□□ -0.3
PTPRK-205ENST00000368213 IFFO2Q5TF58 517 aa13.18□□□□□ -0.3
PTPRK-205ENST00000368213 KRT28Q7Z3Y7 464 aa13.18□□□□□ -0.3
PTPRK-205ENST00000368213 CCDC7Q96M83 1385 aa13.18□□□□□ -0.3
PTPRK-205ENST00000368213 ST18O60284 1047 aa13.18□□□□□ -0.3
PTPRK-205ENST00000368213 TMOD3Q9NYL9 352 aa13.18□□□□□ -0.3
PTPRK-205ENST00000368213 IKQ13123 557 aaPredicted RBP13.17□□□□□ -0.3
PTPRK-205ENST00000368213 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
PTPRK-205ENST00000368213 CNTLNQ9NXG0 1405 aa13.17□□□□□ -0.3
PTPRK-205ENST00000368213 MYL6BP14649 208 aa13.17□□□□□ -0.3
PTPRK-205ENST00000368213 HSPA2P54652 639 aa13.17□□□□□ -0.3
PTPRK-205ENST00000368213 CREBRFQ8IUR6 639 aa13.17□□□□□ -0.3
PTPRK-205ENST00000368213 HDGFL1Q5TGJ6 251 aa13.17□□□□□ -0.3
PTPRK-205ENST00000368213 GNL3LQ9NVN8 582 aaKnown RBP13.17□□□□□ -0.3
PTPRK-205ENST00000368213 TIAM1Q13009 1591 aa13.17□□□□□ -0.3
PTPRK-205ENST00000368213 ERC2O15083 957 aa13.16□□□□□ -0.3
PTPRK-205ENST00000368213 STARD3NLO95772 234 aa13.16□□□□□ -0.3
PTPRK-205ENST00000368213 TBC1D2BQ9UPU7 963 aa13.16□□□□□ -0.3
PTPRK-205ENST00000368213 ZPR1O75312 459 aa13.16□□□□□ -0.3
PTPRK-205ENST00000368213 ZKSCAN1P17029 563 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-205ENST00000368213 FAM135AQ9P2D6 1515 aa13.16□□□□□ -0.3
PTPRK-205ENST00000368213 RBM5P52756 815 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTPRK-205ENST00000368213 TRIM29Q14134 588 aa13.15□□□□□ -0.3
PTPRK-205ENST00000368213 EXOC5O00471 708 aa13.15□□□□□ -0.3
PTPRK-205ENST00000368213 TPM4P67936 248 aa13.15□□□□□ -0.3
PTPRK-205ENST00000368213 GBP4Q96PP9 640 aa13.15□□□□□ -0.3
PTPRK-205ENST00000368213 CCDC43Q96MW1 224 aaKnown RBP13.15□□□□□ -0.3
PTPRK-205ENST00000368213 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
PTPRK-205ENST00000368213 CPLX1O14810 134 aa13.15□□□□□ -0.3
PTPRK-205ENST00000368213 TCP11L2Q8N4U5 519 aa13.15□□□□□ -0.3
PTPRK-205ENST00000368213 CSPP1Q1MSJ5 1256 aa13.14□□□□□ -0.31
PTPRK-205ENST00000368213 WWC1Q8IX03 1113 aa13.14□□□□□ -0.31
PTPRK-205ENST00000368213 ERICH6BQ5W0A0 696 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms