RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 PRDM2Q13029 1718 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 FRAT2O75474 233 aaPredicted RBP10.01□□□□□ -0.81
SHPRH-203ENST00000367505 TOMM22Q9NS69 142 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 LTV1Q96GA3 475 aaPredicted RBP10.01□□□□□ -0.81
SHPRH-203ENST00000367505 CLSTN1O94985 981 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 CPLX1O14810 134 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 PDZRN3Q9UPQ7 1066 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 PDCP20941 246 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 G3BP1Q13283 466 aaKnown RBP eCLIP10.01□□□□□ -0.81
SHPRH-203ENST00000367505 WDR63Q8IWG1 891 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 HOMER1Q86YM7 354 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 ZNF592Q92610 1267 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 NAT10Q9H0A0 1025 aaKnown RBP10.01□□□□□ -0.81
SHPRH-203ENST00000367505 TOP2BQ02880 1626 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 VPS37CA5D8V6 355 aaPredicted RBP10□□□□□ -0.81
SHPRH-203ENST00000367505 WDR97A6NE52 1622 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 RAD54L2Q9Y4B4 1467 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 GNAI3P08754 354 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 CFTRP13569 1480 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 PSMA5P28066 241 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 MTHFSP49914 203 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 CCAR2Q8N163 923 aaKnown RBP10□□□□□ -0.81
SHPRH-203ENST00000367505 CEP89Q96ST8 783 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 CREBRFQ8IUR6 639 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 ABCF1Q8NE71 845 aaKnown RBP eCLIP10□□□□□ -0.81
SHPRH-203ENST00000367505 TRDNQ13061 729 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 DHX8Q14562 1220 aaKnown RBP9.99□□□□□ -0.81
SHPRH-203ENST00000367505 CCDC47Q96A33 483 aaKnown RBP9.99□□□□□ -0.81
SHPRH-203ENST00000367505 ACBD3Q9H3P7 528 aa9.99□□□□□ -0.81
SHPRH-203ENST00000367505 ZNF428Q96B54 188 aa9.99□□□□□ -0.81
SHPRH-203ENST00000367505 IFT57Q9NWB7 429 aa9.99□□□□□ -0.81
SHPRH-203ENST00000367505 TSPYL4Q9UJ04 414 aa9.98□□□□□ -0.81
SHPRH-203ENST00000367505 PES1O00541 588 aaKnown RBP9.98□□□□□ -0.81
SHPRH-203ENST00000367505 TMX4Q9H1E5 349 aaPredicted RBP9.98□□□□□ -0.81
SHPRH-203ENST00000367505 R3HCC1Q9Y3T6 440 aaKnown RBP9.98□□□□□ -0.81
SHPRH-203ENST00000367505 SUPT6HQ7KZ85 1726 aaKnown RBP9.98□□□□□ -0.81
SHPRH-203ENST00000367505 PLEKHH2Q8IVE3 1493 aa9.98□□□□□ -0.81
SHPRH-203ENST00000367505 BRPF3Q9ULD4 1205 aa9.98□□□□□ -0.81
SHPRH-203ENST00000367505 NBPF8Q3BBV2 869 aa9.97□□□□□ -0.81
SHPRH-203ENST00000367505 CNTROBQ8N137 903 aa9.97□□□□□ -0.81
SHPRH-203ENST00000367505 CAVIN1Q6NZI2 390 aaKnown RBP9.97□□□□□ -0.81
SHPRH-203ENST00000367505 HIP1O00291 1037 aa9.97□□□□□ -0.81
SHPRH-203ENST00000367505 TTC5Q8N0Z6 440 aa9.97□□□□□ -0.81
SHPRH-203ENST00000367505 MNS1Q8NEH6 495 aa9.97□□□□□ -0.81
SHPRH-203ENST00000367505 TSPY26PQ9H489 355 aa9.97□□□□□ -0.81
SHPRH-203ENST00000367505 UBTFL1P0CB47 393 aaPredicted RBP9.97□□□□□ -0.81
SHPRH-203ENST00000367505 MARCH6O60337 910 aa9.96□□□□□ -0.81
SHPRH-203ENST00000367505 PDIA4P13667 645 aaKnown RBP9.96□□□□□ -0.81
SHPRH-203ENST00000367505 EIF2S2P20042 333 aaKnown RBP9.96□□□□□ -0.81
SHPRH-203ENST00000367505 MAP3K1Q13233 1512 aa9.96□□□□□ -0.81
SHPRH-203ENST00000367505 HECW1Q76N89 1606 aa9.96□□□□□ -0.82
SHPRH-203ENST00000367505 SAFBQ15424 915 aaKnown RBP eCLIP9.96□□□□□ -0.82
SHPRH-203ENST00000367505 CCP110O43303 1012 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 NEK4P51957 841 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 CLASRPQ8N2M8 674 aaKnown RBP9.95□□□□□ -0.82
SHPRH-203ENST00000367505 GRIN2BQ13224 1484 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 K7ELQ4 463 aaPredicted RBP9.95□□□□□ -0.82
SHPRH-203ENST00000367505 C9orf84Q5VXU9 1444 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 NUTM2FA1L443 756 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 GRPEL1Q9HAV7 217 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 MCM4P33991 863 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 EXOSC9Q06265 439 aaKnown RBP9.95□□□□□ -0.82
SHPRH-203ENST00000367505 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
SHPRH-203ENST00000367505 WWC1Q8IX03 1113 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 GGNBP2Q9H3C7 697 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 NOM1Q5C9Z4 860 aaKnown RBP9.95□□□□□ -0.82
SHPRH-203ENST00000367505 ATF7IPQ6VMQ6 1270 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 ERBINQ96RT1 1412 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 SYNJ2O15056 1496 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 CCDC30Q5VVM6 783 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 CCDC66A2RUB6 948 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 HSP90B2PQ58FF3 399 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 NAIPQ13075 1403 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 TROQ12816 1431 aaPredicted RBP9.94□□□□□ -0.82
SHPRH-203ENST00000367505 PRPF40AO75400 957 aaKnown RBP9.94□□□□□ -0.82
SHPRH-203ENST00000367505 HMOX1P09601 288 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 GAS2L2Q8NHY3 880 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 SDF4Q9BRK5 362 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 WDR33Q9C0J8 1336 aaKnown RBP9.93□□□□□ -0.82
SHPRH-203ENST00000367505 RNF214Q8ND24 703 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 ARHGAP5Q13017 1502 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 GTF2E1P29083 439 aaPredicted RBP9.93□□□□□ -0.82
SHPRH-203ENST00000367505 RALYLQ86SE5 291 aaKnown RBP9.93□□□□□ -0.82
SHPRH-203ENST00000367505 BCAR3O75815 825 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 OLFM4Q6UX06 510 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 ERC1Q8IUD2 1116 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 AEBP1Q8IUX7 1158 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 AMOTL1Q8IY63 956 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 IL27Q8NEV9 243 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 TRIM5Q9C035 493 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 RRP9O43818 475 aaKnown RBP9.93□□□□□ -0.82
SHPRH-203ENST00000367505 TWISTNBQ3B726 338 aaPredicted RBP9.93□□□□□ -0.82
SHPRH-203ENST00000367505 ESPNB1AK53 854 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 KINO60870 393 aaKnown RBP9.92□□□□□ -0.82
SHPRH-203ENST00000367505 CDR1P51861 262 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 ERICH2A1L162 156 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 SRCIN1Q9C0H9 1055 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 DAPK1P53355 1430 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 GNAI2P04899 355 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 NBPF1Q3BBV0 1214 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms