RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 DLC1Q96QB1 1528 aa15.17■□□□□ 0.02
YBX3-203ENST00000366286 DHX57Q6P158 1386 aaKnown RBP15.16■□□□□ 0.02
YBX3-203ENST00000366286 PHF23Q9BUL5 403 aaPredicted RBP15.16■□□□□ 0.02
YBX3-203ENST00000366286 KIAA1210Q9ULL0 1709 aa15.16■□□□□ 0.02
YBX3-203ENST00000366286 LRP6O75581 1613 aa15.14■□□□□ 0.01
YBX3-203ENST00000366286 WAPLQ7Z5K2 1190 aa15.14■□□□□ 0.01
YBX3-203ENST00000366286 DCAF11Q8TEB1 546 aa15.14■□□□□ 0.01
YBX3-203ENST00000366286 KDM2AQ9Y2K7 1162 aa15.14■□□□□ 0.01
YBX3-203ENST00000366286 ADGRB2O60241 1585 aa15.14■□□□□ 0.01
YBX3-203ENST00000366286 KIF1AQ12756 1690 aa15.13■□□□□ 0.01
YBX3-203ENST00000366286 DDX17Q92841 729 aaKnown RBP15.11■□□□□ 0.01
YBX3-203ENST00000366286 USP32Q8NFA0 1604 aa15.1■□□□□ 0.01
YBX3-203ENST00000366286 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
YBX3-203ENST00000366286 SIRT1Q96EB6 747 aa15.09■□□□□ 0.01
YBX3-203ENST00000366286 SPATA31A6Q5VVP1 1343 aa15.09■□□□□ 0.01
YBX3-203ENST00000366286 COL22A1Q8NFW1 1626 aaPredicted RBP15.09■□□□□ 0.01
YBX3-203ENST00000366286 STAC3Q96MF2 364 aa15.08■□□□□ 0
YBX3-203ENST00000366286 PNPLA6Q8IY17 1366 aa15.08■□□□□ 0
YBX3-203ENST00000366286 PXDNQ92626 1479 aa15.08■□□□□ 0
YBX3-203ENST00000366286 PRAM1Q96QH2 718 aa15.07■□□□□ 0
YBX3-203ENST00000366286 RGS17Q9UGC6 210 aaPredicted RBP15.07■□□□□ 0
YBX3-203ENST00000366286 MARF1Q9Y4F3 1742 aaKnown RBP15.06■□□□□ 0
YBX3-203ENST00000366286 NUTM2FA1L443 756 aa15.06■□□□□ 0
YBX3-203ENST00000366286 SAFB2Q14151 953 aaKnown RBP eCLIP15.06■□□□□ 0
YBX3-203ENST00000366286 TRPM1Q7Z4N2 1603 aa15.06■□□□□ 0
YBX3-203ENST00000366286 ITSN1Q15811 1721 aa15.06■□□□□ 0
YBX3-203ENST00000366286 SOCS7O14512 581 aa15.05■□□□□ -0
YBX3-203ENST00000366286 ESCO1Q5FWF5 840 aa15.05■□□□□ -0
YBX3-203ENST00000366286 LRRC59Q96AG4 307 aaKnown RBP15.05■□□□□ -0
YBX3-203ENST00000366286 TRAK1Q9UPV9 953 aa15.05■□□□□ -0
YBX3-203ENST00000366286 SOS2Q07890 1332 aaPredicted RBP15.05■□□□□ -0
YBX3-203ENST00000366286 NPHP3Q7Z494 1330 aa15.03■□□□□ -0
YBX3-203ENST00000366286 POGKQ9P215 609 aa15.03■□□□□ -0
YBX3-203ENST00000366286 QRICH2Q9H0J4 1663 aa15.03■□□□□ -0
YBX3-203ENST00000366286 TULP4Q9NRJ4 1543 aa15.02■□□□□ -0
YBX3-203ENST00000366286 NUTM2BA6NNL0 878 aaPredicted RBP15.02■□□□□ -0
YBX3-203ENST00000366286 NUTM2EB1AL46 878 aaPredicted RBP15.02■□□□□ -0
YBX3-203ENST00000366286 TRIM26Q12899 539 aaPredicted RBP15.02■□□□□ -0
YBX3-203ENST00000366286 MEX3CQ5U5Q3 659 aaKnown RBP15.02■□□□□ -0
YBX3-203ENST00000366286 NUTM2AQ8IVF1 878 aaPredicted RBP15.02■□□□□ -0
YBX3-203ENST00000366286 ANKARQ7Z5J8 1434 aa15.01□□□□□ -0.01
YBX3-203ENST00000366286 ABCA3Q99758 1704 aa15.01□□□□□ -0.01
YBX3-203ENST00000366286 TOPAZ1Q8N9V7 1692 aa15.01□□□□□ -0.01
YBX3-203ENST00000366286 SIN3AQ96ST3 1273 aa15.01□□□□□ -0.01
YBX3-203ENST00000366286 TRPM3Q9HCF6 1732 aaPredicted RBP15□□□□□ -0.01
YBX3-203ENST00000366286 MINK1Q8N4C8 1332 aaPredicted RBP15□□□□□ -0.01
YBX3-203ENST00000366286 POTEAQ6S8J7 498 aa15□□□□□ -0.01
YBX3-203ENST00000366286 HIRIP3Q9BW71 556 aaPredicted RBP15□□□□□ -0.01
YBX3-203ENST00000366286 FOXO3O43524 673 aa14.99□□□□□ -0.01
YBX3-203ENST00000366286 XPCQ01831 940 aaPredicted RBP14.99□□□□□ -0.01
YBX3-203ENST00000366286 L3MBTL2Q969R5 705 aa14.98□□□□□ -0.01
YBX3-203ENST00000366286 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
YBX3-203ENST00000366286 NEUROD1Q13562 356 aa14.97□□□□□ -0.01
YBX3-203ENST00000366286 NBPF1Q3BBV0 1214 aa14.97□□□□□ -0.01
YBX3-203ENST00000366286 ALS2Q96Q42 1657 aa14.97□□□□□ -0.01
YBX3-203ENST00000366286 ATP7BP35670 1465 aa14.96□□□□□ -0.01
YBX3-203ENST00000366286 PHF8Q9UPP1 1060 aa14.96□□□□□ -0.01
YBX3-203ENST00000366286 TNS3Q68CZ2 1445 aa14.95□□□□□ -0.02
YBX3-203ENST00000366286 AFF2P51816 1311 aa14.94□□□□□ -0.02
YBX3-203ENST00000366286 PRR36Q9H6K5 1346 aa14.94□□□□□ -0.02
YBX3-203ENST00000366286 WASLO00401 505 aaPredicted RBP14.94□□□□□ -0.02
YBX3-203ENST00000366286 C8orf37Q96NL8 207 aa14.94□□□□□ -0.02
YBX3-203ENST00000366286 CRYBG1Q9Y4K1 1723 aa14.94□□□□□ -0.02
YBX3-203ENST00000366286 ZNF772Q68DY9 489 aaPredicted RBP14.93□□□□□ -0.02
YBX3-203ENST00000366286 SPATA31A3Q5VYP0 1347 aa14.92□□□□□ -0.02
YBX3-203ENST00000366286 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.92□□□□□ -0.02
YBX3-203ENST00000366286 ADAMTS2O95450 1211 aa14.92□□□□□ -0.02
YBX3-203ENST00000366286 KRT28Q7Z3Y7 464 aa14.92□□□□□ -0.02
YBX3-203ENST00000366286 PLCH1Q4KWH8 1693 aa14.92□□□□□ -0.02
YBX3-203ENST00000366286 SBNO1A3KN83 1393 aa14.91□□□□□ -0.02
YBX3-203ENST00000366286 PMFBP1Q8TBY8 1022 aa14.91□□□□□ -0.02
YBX3-203ENST00000366286 ROCK2O75116 1388 aaKnown RBP14.9□□□□□ -0.02
YBX3-203ENST00000366286 CENPJQ9HC77 1338 aaPredicted RBP14.9□□□□□ -0.02
YBX3-203ENST00000366286 TONSLQ96HA7 1378 aa14.88□□□□□ -0.03
YBX3-203ENST00000366286 PSME1Q06323 249 aa14.88□□□□□ -0.03
YBX3-203ENST00000366286 NWD2Q9ULI1 1742 aa14.88□□□□□ -0.03
YBX3-203ENST00000366286 RALGAPBQ86X10 1494 aa14.88□□□□□ -0.03
YBX3-203ENST00000366286 CDK12Q9NYV4 1490 aaPredicted RBP14.88□□□□□ -0.03
YBX3-203ENST00000366286 PHRF1Q9P1Y6 1649 aaKnown RBP14.88□□□□□ -0.03
YBX3-203ENST00000366286 ARHGEF10O15013 1369 aa14.87□□□□□ -0.03
YBX3-203ENST00000366286 NGLY1Q96IV0 654 aa14.87□□□□□ -0.03
YBX3-203ENST00000366286 CDK19Q9BWU1 502 aa14.87□□□□□ -0.03
YBX3-203ENST00000366286 GPRASP1Q5JY77 1395 aa14.86□□□□□ -0.03
YBX3-203ENST00000366286 NBPF8Q3BBV2 869 aa14.86□□□□□ -0.03
YBX3-203ENST00000366286 NUDT16Q96DE0 195 aaKnown RBP14.86□□□□□ -0.03
YBX3-203ENST00000366286 NRAPQ86VF7 1730 aa14.85□□□□□ -0.03
YBX3-203ENST00000366286 RGS12O14924 1447 aa14.84□□□□□ -0.03
YBX3-203ENST00000366286 ATRNO75882 1429 aa14.84□□□□□ -0.03
YBX3-203ENST00000366286 AKAP12Q02952 1782 aa14.84□□□□□ -0.03
YBX3-203ENST00000366286 RXRBP28702 533 aa14.84□□□□□ -0.03
YBX3-203ENST00000366286 LMOD2Q6P5Q4 547 aa14.84□□□□□ -0.03
YBX3-203ENST00000366286 NGDNQ8NEJ9 315 aaKnown RBP14.84□□□□□ -0.03
YBX3-203ENST00000366286 POLR3AO14802 1390 aaPredicted RBP14.84□□□□□ -0.03
YBX3-203ENST00000366286 BCL9LQ86UU0 1499 aa14.83□□□□□ -0.03
YBX3-203ENST00000366286 SLIT2O94813 1529 aa14.83□□□□□ -0.04
YBX3-203ENST00000366286 FNBP4Q8N3X1 1017 aaPredicted RBP14.83□□□□□ -0.04
YBX3-203ENST00000366286 QTRT2Q9H974 415 aaKnown RBP14.83□□□□□ -0.04
YBX3-203ENST00000366286 USP21Q9UK80 565 aa14.83□□□□□ -0.04
YBX3-203ENST00000366286 COL14A1Q05707 1796 aaKnown RBP14.83□□□□□ -0.04
YBX3-203ENST00000366286 PPIP5K1Q6PFW1 1433 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms