RNA–Protein interactions for RNA: ENST00000361690.7

SRPK1-202, Transcript of SRSF protein kinase 1, humanhuman

TSL 1 (best)

Gene SRPK1, Length 4,286 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-202ENST00000361690 TERF2IPQ9NYB0 399 aa13.5□□□□□ -0.25
SRPK1-202ENST00000361690 PTPRMP28827 1452 aa13.49□□□□□ -0.25
SRPK1-202ENST00000361690 NPC1L1Q9UHC9 1359 aa13.49□□□□□ -0.25
SRPK1-202ENST00000361690 NEFLP07196 543 aa13.49□□□□□ -0.25
SRPK1-202ENST00000361690 PPP2R1AP30153 589 aa13.49□□□□□ -0.25
SRPK1-202ENST00000361690 MORC1Q86VD1 984 aa13.49□□□□□ -0.25
SRPK1-202ENST00000361690 NSD3Q9BZ95 1437 aa13.49□□□□□ -0.25
SRPK1-202ENST00000361690 PLEKHG1Q9ULL1 1385 aa13.49□□□□□ -0.25
SRPK1-202ENST00000361690 CGNL1Q0VF96 1302 aa13.49□□□□□ -0.25
SRPK1-202ENST00000361690 UBR1Q8IWV7 1749 aa13.48□□□□□ -0.25
SRPK1-202ENST00000361690 WDR43Q15061 677 aaKnown RBP eCLIP13.48□□□□□ -0.25
SRPK1-202ENST00000361690 HDGFL2Q7Z4V5 671 aaPredicted RBP13.48□□□□□ -0.25
SRPK1-202ENST00000361690 ZBED9Q6R2W3 1325 aa13.48□□□□□ -0.25
SRPK1-202ENST00000361690 NINLQ9Y2I6 1382 aa13.47□□□□□ -0.25
SRPK1-202ENST00000361690 TULP4Q9NRJ4 1543 aa13.47□□□□□ -0.25
SRPK1-202ENST00000361690 MYOM1P52179 1685 aa13.46□□□□□ -0.25
SRPK1-202ENST00000361690 ANKRD36BQ8N2N9 1353 aa13.46□□□□□ -0.25
SRPK1-202ENST00000361690 DLC1Q96QB1 1528 aa13.46□□□□□ -0.26
SRPK1-202ENST00000361690 PLEKHH1Q9ULM0 1364 aa13.46□□□□□ -0.26
SRPK1-202ENST00000361690 RIMS1Q86UR5 1692 aaKnown RBP13.45□□□□□ -0.26
SRPK1-202ENST00000361690 TNNT2P45379 298 aaPredicted RBP13.45□□□□□ -0.26
SRPK1-202ENST00000361690 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
SRPK1-202ENST00000361690 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
SRPK1-202ENST00000361690 TBX22Q9Y458 520 aa13.44□□□□□ -0.26
SRPK1-202ENST00000361690 ANKLE2Q86XL3 938 aa13.44□□□□□ -0.26
SRPK1-202ENST00000361690 CABP1Q9NZU7 370 aa13.44□□□□□ -0.26
SRPK1-202ENST00000361690 WASLO00401 505 aaPredicted RBP13.44□□□□□ -0.26
SRPK1-202ENST00000361690 ADAMTS13Q76LX8 1427 aa13.43□□□□□ -0.26
SRPK1-202ENST00000361690 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
SRPK1-202ENST00000361690 SALL2Q9Y467 1007 aaPredicted RBP13.42□□□□□ -0.26
SRPK1-202ENST00000361690 AMOTL2Q9Y2J4 779 aa13.42□□□□□ -0.26
SRPK1-202ENST00000361690 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
SRPK1-202ENST00000361690 NRXN3Q9Y4C0 1643 aa13.42□□□□□ -0.26
SRPK1-202ENST00000361690 SLIT1O75093 1534 aa13.42□□□□□ -0.26
SRPK1-202ENST00000361690 A0A1W2PP64 1363 aa13.41□□□□□ -0.26
SRPK1-202ENST00000361690 CFAP53Q96M91 514 aa13.4□□□□□ -0.26
SRPK1-202ENST00000361690 NSD2O96028 1365 aa13.4□□□□□ -0.26
SRPK1-202ENST00000361690 TECPR2O15040 1411 aa13.4□□□□□ -0.26
SRPK1-202ENST00000361690 CEP170BQ9Y4F5 1589 aaPredicted RBP13.39□□□□□ -0.27
SRPK1-202ENST00000361690 NUDT16Q96DE0 195 aaKnown RBP13.39□□□□□ -0.27
SRPK1-202ENST00000361690 ROBO2Q9HCK4 1378 aa13.39□□□□□ -0.27
SRPK1-202ENST00000361690 CCDC61Q9Y6R9 512 aa13.39□□□□□ -0.27
SRPK1-202ENST00000361690 SETD1AO15047 1707 aaKnown RBP13.39□□□□□ -0.27
SRPK1-202ENST00000361690 GGNBP2Q9H3C7 697 aa13.39□□□□□ -0.27
SRPK1-202ENST00000361690 ADAMTS8Q9UP79 889 aa13.38□□□□□ -0.27
SRPK1-202ENST00000361690 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
SRPK1-202ENST00000361690 FKBP8Q14318 412 aa13.37□□□□□ -0.27
SRPK1-202ENST00000361690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.37□□□□□ -0.274e-7■■■□□ 14.6
SRPK1-202ENST00000361690 SUPT16HQ9Y5B9 1047 aaKnown RBP13.37□□□□□ -0.27
SRPK1-202ENST00000361690 ADAMTSL3P82987 1691 aa13.37□□□□□ -0.27
SRPK1-202ENST00000361690 SETD1BQ9UPS6 1966 aaKnown RBP13.36□□□□□ -0.27
SRPK1-202ENST00000361690 PPIP5K1Q6PFW1 1433 aa13.35□□□□□ -0.27
SRPK1-202ENST00000361690 CPS1P31327 1500 aa13.35□□□□□ -0.27
SRPK1-202ENST00000361690 MTHFSP49914 203 aa13.35□□□□□ -0.27
SRPK1-202ENST00000361690 MED14O60244 1454 aa13.35□□□□□ -0.27
SRPK1-202ENST00000361690 FYB1O15117 783 aa13.34□□□□□ -0.27
SRPK1-202ENST00000361690 NUDCQ9Y266 331 aa13.34□□□□□ -0.27
SRPK1-202ENST00000361690 INSRP06213 1382 aa13.34□□□□□ -0.27
SRPK1-202ENST00000361690 PTPRUQ92729 1446 aa13.34□□□□□ -0.27
SRPK1-202ENST00000361690 KNDC1Q76NI1 1749 aa13.33□□□□□ -0.27
SRPK1-202ENST00000361690 KCNA6P17658 529 aa13.33□□□□□ -0.28
SRPK1-202ENST00000361690 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
SRPK1-202ENST00000361690 ATP7BP35670 1465 aa13.33□□□□□ -0.28
SRPK1-202ENST00000361690 POLR3AO14802 1390 aaPredicted RBP13.32□□□□□ -0.28
SRPK1-202ENST00000361690 PIK3R4Q99570 1358 aa13.32□□□□□ -0.28
SRPK1-202ENST00000361690 PDE3BQ13370 1112 aa13.32□□□□□ -0.28
SRPK1-202ENST00000361690 DIP2AQ14689 1571 aa13.32□□□□□ -0.28
SRPK1-202ENST00000361690 NCKAP5LQ9HCH0 1330 aa13.32□□□□□ -0.28
SRPK1-202ENST00000361690 CCDC146Q8IYE0 955 aa13.32□□□□□ -0.28
SRPK1-202ENST00000361690 USP32Q8NFA0 1604 aa13.31□□□□□ -0.28
SRPK1-202ENST00000361690 C14orf37Q86TY3 774 aa13.31□□□□□ -0.28
SRPK1-202ENST00000361690 BLMP54132 1417 aaPredicted RBP13.31□□□□□ -0.28
SRPK1-202ENST00000361690 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
SRPK1-202ENST00000361690 SMG6Q86US8 1419 aaKnown RBP13.3□□□□□ -0.28
SRPK1-202ENST00000361690 PRR36Q9H6K5 1346 aa13.3□□□□□ -0.28
SRPK1-202ENST00000361690 CD163L1Q9NR16 1453 aa13.3□□□□□ -0.28
SRPK1-202ENST00000361690 PPM1GO15355 546 aaPredicted RBP13.29□□□□□ -0.28
SRPK1-202ENST00000361690 NGDNQ8NEJ9 315 aaKnown RBP13.29□□□□□ -0.28
SRPK1-202ENST00000361690 COG3Q96JB2 828 aa13.29□□□□□ -0.28
SRPK1-202ENST00000361690 EDC4Q6P2E9 1401 aaKnown RBP13.29□□□□□ -0.28
SRPK1-202ENST00000361690 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
SRPK1-202ENST00000361690 U2AF1L5P0DN76 240 aaPredicted RBP13.28□□□□□ -0.28
SRPK1-202ENST00000361690 U2AF1Q01081 240 aaKnown RBP eCLIP13.28□□□□□ -0.28
SRPK1-202ENST00000361690 NPHP4O75161 1426 aaPredicted RBP13.28□□□□□ -0.28
SRPK1-202ENST00000361690 APAF1O14727 1248 aa13.27□□□□□ -0.28
SRPK1-202ENST00000361690 NME9Q86XW9 330 aa13.27□□□□□ -0.28
SRPK1-202ENST00000361690 ACEP12821 1306 aa13.27□□□□□ -0.28
SRPK1-202ENST00000361690 IRX6P78412 446 aaPredicted RBP13.27□□□□□ -0.28
SRPK1-202ENST00000361690 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.28
SRPK1-202ENST00000361690 PMFBP1Q8TBY8 1022 aa13.27□□□□□ -0.28
SRPK1-202ENST00000361690 PLEKHG3A1L390 1219 aa13.26□□□□□ -0.29
SRPK1-202ENST00000361690 ZNF142P52746 1687 aaPredicted RBP13.26□□□□□ -0.29
SRPK1-202ENST00000361690 CPSF1Q10570 1443 aaKnown RBP13.26□□□□□ -0.29
SRPK1-202ENST00000361690 NGEFQ8N5V2 710 aa13.25□□□□□ -0.29
SRPK1-202ENST00000361690 RUNDC1Q96C34 613 aa13.25□□□□□ -0.29
SRPK1-202ENST00000361690 DIAPH1O60610 1272 aaKnown RBP13.24□□□□□ -0.29
SRPK1-202ENST00000361690 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.24□□□□□ -0.29
SRPK1-202ENST00000361690 GOLGA2Q08379 1002 aa13.24□□□□□ -0.29
SRPK1-202ENST00000361690 RBM33Q96EV2 1170 aaKnown RBP13.24□□□□□ -0.29
SRPK1-202ENST00000361690 CDCA7LQ96GN5 454 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms