RNA–Protein interactions for RNA: ENST00000361672.6

MSL3-203, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-203ENST00000361672 SIRT1Q96EB6 747 aa12.72□□□□□ -0.37
MSL3-203ENST00000361672 PIK3C2GO75747 1445 aa12.71□□□□□ -0.37
MSL3-203ENST00000361672 ATRNO75882 1429 aa12.71□□□□□ -0.38
MSL3-203ENST00000361672 LRPPRCP42704 1394 aaKnown RBP12.71□□□□□ -0.38
MSL3-203ENST00000361672 FMN2Q9NZ56 1722 aa12.7□□□□□ -0.38
MSL3-203ENST00000361672 DLC1Q96QB1 1528 aa12.7□□□□□ -0.38
MSL3-203ENST00000361672 MARF1Q9Y4F3 1742 aaKnown RBP12.7□□□□□ -0.38
MSL3-203ENST00000361672 NUTM2DQ5VT03 806 aaPredicted RBP12.69□□□□□ -0.38
MSL3-203ENST00000361672 QTRT2Q9H974 415 aaKnown RBP12.69□□□□□ -0.38
MSL3-203ENST00000361672 PNPLA6Q8IY17 1366 aa12.69□□□□□ -0.38
MSL3-203ENST00000361672 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
MSL3-203ENST00000361672 RBM33Q96EV2 1170 aaKnown RBP12.69□□□□□ -0.38
MSL3-203ENST00000361672 ROBO2Q9HCK4 1378 aa12.69□□□□□ -0.38
MSL3-203ENST00000361672 HRCP23327 699 aa12.68□□□□□ -0.38
MSL3-203ENST00000361672 LRRC59Q96AG4 307 aaKnown RBP12.68□□□□□ -0.38
MSL3-203ENST00000361672 NUTM2BA6NNL0 878 aaPredicted RBP12.68□□□□□ -0.38
MSL3-203ENST00000361672 NUTM2EB1AL46 878 aaPredicted RBP12.68□□□□□ -0.38
MSL3-203ENST00000361672 NUTM2AQ8IVF1 878 aaPredicted RBP12.68□□□□□ -0.38
MSL3-203ENST00000361672 ADGRB2O60241 1585 aa12.68□□□□□ -0.38
MSL3-203ENST00000361672 SOS2Q07890 1332 aaPredicted RBP12.67□□□□□ -0.38
MSL3-203ENST00000361672 BLMP54132 1417 aaPredicted RBP12.66□□□□□ -0.38
MSL3-203ENST00000361672 STAC3Q96MF2 364 aa12.66□□□□□ -0.38
MSL3-203ENST00000361672 MPHOSPH9Q99550 1183 aa12.66□□□□□ -0.38
MSL3-203ENST00000361672 PPARGC1BQ86YN6 1023 aaKnown RBP12.65□□□□□ -0.38
MSL3-203ENST00000361672 TRPC5Q9UL62 973 aaPredicted RBP12.65□□□□□ -0.38
MSL3-203ENST00000361672 PXDNQ92626 1479 aa12.64□□□□□ -0.39
MSL3-203ENST00000361672 YTHDC2Q9H6S0 1430 aaKnown RBP12.63□□□□□ -0.39
MSL3-203ENST00000361672 FNBP4Q8N3X1 1017 aaPredicted RBP12.62□□□□□ -0.39
MSL3-203ENST00000361672 KIAA1210Q9ULL0 1709 aa12.61□□□□□ -0.39
MSL3-203ENST00000361672 ANKARQ7Z5J8 1434 aa12.61□□□□□ -0.39
MSL3-203ENST00000361672 NPHP3Q7Z494 1330 aa12.6□□□□□ -0.39
MSL3-203ENST00000361672 ADGRF5Q8IZF2 1346 aa12.6□□□□□ -0.39
MSL3-203ENST00000361672 C14orf93Q9H972 538 aaKnown RBP12.6□□□□□ -0.39
MSL3-203ENST00000361672 BCL9LQ86UU0 1499 aa12.6□□□□□ -0.39
MSL3-203ENST00000361672 ADGRB1O14514 1584 aa12.59□□□□□ -0.39
MSL3-203ENST00000361672 DHX57Q6P158 1386 aaKnown RBP12.59□□□□□ -0.39
MSL3-203ENST00000361672 C8orf37Q96NL8 207 aa12.58□□□□□ -0.4
MSL3-203ENST00000361672 EIF3AQ14152 1382 aaKnown RBP12.58□□□□□ -0.4
MSL3-203ENST00000361672 RAB3GAP2Q9H2M9 1393 aa12.58□□□□□ -0.4
MSL3-203ENST00000361672 ABCA3Q99758 1704 aa12.57□□□□□ -0.4
MSL3-203ENST00000361672 NWD2Q9ULI1 1742 aa12.57□□□□□ -0.4
MSL3-203ENST00000361672 ITSN1Q15811 1721 aa12.56□□□□□ -0.4
MSL3-203ENST00000361672 SBNO1A3KN83 1393 aa12.56□□□□□ -0.4
MSL3-203ENST00000361672 USP21Q9UK80 565 aa12.55□□□□□ -0.4
MSL3-203ENST00000361672 RGPD1P0DJD0 1748 aa12.55□□□□□ -0.4
MSL3-203ENST00000361672 BRWD3Q6RI45 1802 aa12.55□□□□□ -0.4
MSL3-203ENST00000361672 USP32Q8NFA0 1604 aa12.55□□□□□ -0.4
MSL3-203ENST00000361672 TRPM3Q9HCF6 1732 aaPredicted RBP12.54□□□□□ -0.4
MSL3-203ENST00000361672 ARHGEF28Q8N1W1 1705 aaKnown RBP12.53□□□□□ -0.4
MSL3-203ENST00000361672 GLI3P10071 1580 aa12.53□□□□□ -0.4
MSL3-203ENST00000361672 ORAI2Q96SN7 254 aa12.53□□□□□ -0.4
MSL3-203ENST00000361672 TULP4Q9NRJ4 1543 aa12.52□□□□□ -0.4
MSL3-203ENST00000361672 TNS3Q68CZ2 1445 aa12.52□□□□□ -0.41
MSL3-203ENST00000361672 ALS2Q96Q42 1657 aa12.52□□□□□ -0.41
MSL3-203ENST00000361672 RGPD8O14715 1765 aaPredicted RBP12.52□□□□□ -0.41
MSL3-203ENST00000361672 PLEKHH1Q9ULM0 1364 aa12.51□□□□□ -0.41
MSL3-203ENST00000361672 SLIT2O94813 1529 aa12.51□□□□□ -0.41
MSL3-203ENST00000361672 CRYBG1Q9Y4K1 1723 aa12.51□□□□□ -0.41
MSL3-203ENST00000361672 SPATA31A3Q5VYP0 1347 aa12.5□□□□□ -0.41
MSL3-203ENST00000361672 PLCH1Q4KWH8 1693 aa12.5□□□□□ -0.41
MSL3-203ENST00000361672 RALGAPBQ86X10 1494 aa12.5□□□□□ -0.41
MSL3-203ENST00000361672 ARHGEF10O15013 1369 aa12.5□□□□□ -0.41
MSL3-203ENST00000361672 IFFO2Q5TF58 517 aa12.5□□□□□ -0.41
MSL3-203ENST00000361672 DISP2A7MBM2 1401 aa12.5□□□□□ -0.41
MSL3-203ENST00000361672 TOPAZ1Q8N9V7 1692 aa12.5□□□□□ -0.41
MSL3-203ENST00000361672 PSME1Q06323 249 aa12.49□□□□□ -0.41
MSL3-203ENST00000361672 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
MSL3-203ENST00000361672 RGL3Q3MIN7 710 aa12.49□□□□□ -0.41
MSL3-203ENST00000361672 ESCO1Q5FWF5 840 aa12.48□□□□□ -0.41
MSL3-203ENST00000361672 NRAPQ86VF7 1730 aa12.48□□□□□ -0.41
MSL3-203ENST00000361672 GJD4Q96KN9 370 aaPredicted RBP12.48□□□□□ -0.41
MSL3-203ENST00000361672 COL14A1Q05707 1796 aaKnown RBP12.47□□□□□ -0.41
MSL3-203ENST00000361672 WAPLQ7Z5K2 1190 aa12.46□□□□□ -0.41
MSL3-203ENST00000361672 DDX17Q92841 729 aaKnown RBP12.46□□□□□ -0.41
MSL3-203ENST00000361672 ATP7BP35670 1465 aa12.46□□□□□ -0.42
MSL3-203ENST00000361672 CFAP70Q5T0N1 1121 aa12.45□□□□□ -0.42
MSL3-203ENST00000361672 PHF8Q9UPP1 1060 aa12.45□□□□□ -0.42
MSL3-203ENST00000361672 TMEM132EQ6IEE7 984 aa12.45□□□□□ -0.42
MSL3-203ENST00000361672 STK26Q9P289 416 aa12.44□□□□□ -0.42
MSL3-203ENST00000361672 TNS1Q9HBL0 1735 aaKnown RBP12.44□□□□□ -0.42
MSL3-203ENST00000361672 ADAMTS2O95450 1211 aa12.44□□□□□ -0.42
MSL3-203ENST00000361672 YY1P25490 414 aa12.44□□□□□ -0.42
MSL3-203ENST00000361672 BRD4O60885 1362 aaPredicted RBP12.44□□□□□ -0.42
MSL3-203ENST00000361672 KRT28Q7Z3Y7 464 aa12.43□□□□□ -0.42
MSL3-203ENST00000361672 BAG6P46379 1132 aa12.42□□□□□ -0.42
MSL3-203ENST00000361672 PRAM1Q96QH2 718 aa12.42□□□□□ -0.42
MSL3-203ENST00000361672 ONECUT3O60422 494 aaPredicted RBP12.42□□□□□ -0.42
MSL3-203ENST00000361672 FOXO3O43524 673 aa12.41□□□□□ -0.42
MSL3-203ENST00000361672 PHRF1Q9P1Y6 1649 aaKnown RBP12.41□□□□□ -0.42
MSL3-203ENST00000361672 PARD3Q8TEW0 1356 aa12.41□□□□□ -0.42
MSL3-203ENST00000361672 RREB1Q92766 1687 aa12.41□□□□□ -0.42
MSL3-203ENST00000361672 UNC5CLQ8IV45 518 aa12.41□□□□□ -0.42
MSL3-203ENST00000361672 NINLQ9Y2I6 1382 aa12.4□□□□□ -0.42
MSL3-203ENST00000361672 POGKQ9P215 609 aa12.4□□□□□ -0.42
MSL3-203ENST00000361672 GPRASP1Q5JY77 1395 aa12.39□□□□□ -0.43
MSL3-203ENST00000361672 WASLO00401 505 aaPredicted RBP12.39□□□□□ -0.43
MSL3-203ENST00000361672 VPS72Q15906 364 aa12.39□□□□□ -0.43
MSL3-203ENST00000361672 POLR3AO14802 1390 aaPredicted RBP12.39□□□□□ -0.43
MSL3-203ENST00000361672 DEFB132Q7Z7B7 95 aa12.38□□□□□ -0.43
MSL3-203ENST00000361672 THSD7AQ9UPZ6 1657 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms