RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 NGLY1Q96IV0 654 aa22.55■■□□□ 1.2
GDPD3-201ENST00000360688 RGS12O14924 1447 aa22.54■■□□□ 1.2
GDPD3-201ENST00000360688 SPATA31E1Q6ZUB1 1445 aa22.54■■□□□ 1.2
GDPD3-201ENST00000360688 RGL3Q3MIN7 710 aa22.53■■□□□ 1.2
GDPD3-201ENST00000360688 COL22A1Q8NFW1 1626 aaPredicted RBP22.52■■□□□ 1.2
GDPD3-201ENST00000360688 MPHOSPH9Q99550 1183 aa22.51■■□□□ 1.19
GDPD3-201ENST00000360688 TECPR2O15040 1411 aa22.51■■□□□ 1.19
GDPD3-201ENST00000360688 ANKRD30BQ9BXX2 1392 aa22.5■■□□□ 1.19
GDPD3-201ENST00000360688 ESCO1Q5FWF5 840 aa22.5■■□□□ 1.19
GDPD3-201ENST00000360688 STK26Q9P289 416 aa22.49■■□□□ 1.19
GDPD3-201ENST00000360688 KNDC1Q76NI1 1749 aa22.48■■□□□ 1.19
GDPD3-201ENST00000360688 NPHP3Q7Z494 1330 aa22.48■■□□□ 1.19
GDPD3-201ENST00000360688 WAPLQ7Z5K2 1190 aa22.48■■□□□ 1.19
GDPD3-201ENST00000360688 LRPPRCP42704 1394 aaKnown RBP22.48■■□□□ 1.19
GDPD3-201ENST00000360688 PXDNQ92626 1479 aa22.47■■□□□ 1.19
GDPD3-201ENST00000360688 USP21Q9UK80 565 aa22.47■■□□□ 1.19
GDPD3-201ENST00000360688 TMEM132EQ6IEE7 984 aa22.46■■□□□ 1.19
GDPD3-201ENST00000360688 FNBP4Q8N3X1 1017 aaPredicted RBP22.46■■□□□ 1.19
GDPD3-201ENST00000360688 ABCC11Q96J66 1382 aa22.46■■□□□ 1.19
GDPD3-201ENST00000360688 MYOM2P54296 1465 aa22.46■■□□□ 1.19
GDPD3-201ENST00000360688 PIK3C2GO75747 1445 aa22.45■■□□□ 1.19
GDPD3-201ENST00000360688 MARF1Q9Y4F3 1742 aaKnown RBP22.45■■□□□ 1.18
GDPD3-201ENST00000360688 PLEKHH1Q9ULM0 1364 aa22.44■■□□□ 1.18
GDPD3-201ENST00000360688 FOXO3O43524 673 aa22.44■■□□□ 1.18
GDPD3-201ENST00000360688 NUTM2FA1L443 756 aa22.43■■□□□ 1.18
GDPD3-201ENST00000360688 XPCQ01831 940 aaPredicted RBP22.43■■□□□ 1.18
GDPD3-201ENST00000360688 TRPC5Q9UL62 973 aaPredicted RBP22.43■■□□□ 1.18
GDPD3-201ENST00000360688 FMN2Q9NZ56 1722 aa22.43■■□□□ 1.18
GDPD3-201ENST00000360688 ATRNO75882 1429 aa22.41■■□□□ 1.18
GDPD3-201ENST00000360688 YTHDC2Q9H6S0 1430 aaKnown RBP22.41■■□□□ 1.18
GDPD3-201ENST00000360688 KIF1AQ12756 1690 aa22.38■■□□□ 1.17
GDPD3-201ENST00000360688 BCL9LQ86UU0 1499 aa22.38■■□□□ 1.17
GDPD3-201ENST00000360688 EP400Q96L91 3159 aa22.37■■□□□ 1.17
GDPD3-201ENST00000360688 ATAD2Q6PL18 1390 aa22.37■■□□□ 1.17
GDPD3-201ENST00000360688 RGPD8O14715 1765 aaPredicted RBP22.37■■□□□ 1.17
GDPD3-201ENST00000360688 SIRT1Q96EB6 747 aa22.35■■□□□ 1.17
GDPD3-201ENST00000360688 C14orf93Q9H972 538 aaKnown RBP22.35■■□□□ 1.17
GDPD3-201ENST00000360688 NRXN1Q9ULB1 1477 aa22.35■■□□□ 1.17
GDPD3-201ENST00000360688 SPATA31A3Q5VYP0 1347 aa22.34■■□□□ 1.17
GDPD3-201ENST00000360688 ACIN1Q9UKV3 1341 aaKnown RBP22.34■■□□□ 1.17
GDPD3-201ENST00000360688 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.33■■□□□ 1.16
GDPD3-201ENST00000360688 CFAP70Q5T0N1 1121 aa22.32■■□□□ 1.16
GDPD3-201ENST00000360688 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
GDPD3-201ENST00000360688 KRT28Q7Z3Y7 464 aa22.31■■□□□ 1.16
GDPD3-201ENST00000360688 GJD4Q96KN9 370 aaPredicted RBP22.3■■□□□ 1.16
GDPD3-201ENST00000360688 SRCAPQ6ZRS2 3230 aa22.28■■□□□ 1.16
GDPD3-201ENST00000360688 USP32Q8NFA0 1604 aa22.28■■□□□ 1.16
GDPD3-201ENST00000360688 SLIT2O94813 1529 aa22.28■■□□□ 1.16
GDPD3-201ENST00000360688 PHF8Q9UPP1 1060 aa22.28■■□□□ 1.16
GDPD3-201ENST00000360688 PRAM1Q96QH2 718 aa22.27■■□□□ 1.16
GDPD3-201ENST00000360688 SAFB2Q14151 953 aaKnown RBP eCLIP22.26■■□□□ 1.15
GDPD3-201ENST00000360688 UNC5CLQ8IV45 518 aa22.26■■□□□ 1.15
GDPD3-201ENST00000360688 TNS3Q68CZ2 1445 aa22.26■■□□□ 1.15
GDPD3-201ENST00000360688 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
GDPD3-201ENST00000360688 GLI3P10071 1580 aa22.25■■□□□ 1.15
GDPD3-201ENST00000360688 DLC1Q96QB1 1528 aa22.24■■□□□ 1.15
GDPD3-201ENST00000360688 PSME1Q06323 249 aa22.24■■□□□ 1.15
GDPD3-201ENST00000360688 RALGAPBQ86X10 1494 aa22.23■■□□□ 1.15
GDPD3-201ENST00000360688 ABCA3Q99758 1704 aa22.22■■□□□ 1.15
GDPD3-201ENST00000360688 SBNO1A3KN83 1393 aa22.22■■□□□ 1.15
GDPD3-201ENST00000360688 ADGRB1O14514 1584 aa22.22■■□□□ 1.15
GDPD3-201ENST00000360688 CCDC125Q86Z20 511 aa22.21■■□□□ 1.15
GDPD3-201ENST00000360688 CABLES1Q8TDN4 633 aa22.21■■□□□ 1.15
GDPD3-201ENST00000360688 POGKQ9P215 609 aa22.21■■□□□ 1.15
GDPD3-201ENST00000360688 BRWD3Q6RI45 1802 aa22.21■■□□□ 1.15
GDPD3-201ENST00000360688 PLCH1Q4KWH8 1693 aa22.2■■□□□ 1.14
GDPD3-201ENST00000360688 ADGRB2O60241 1585 aa22.2■■□□□ 1.14
GDPD3-201ENST00000360688 HAP1P54257 671 aaPredicted RBP22.2■■□□□ 1.14
GDPD3-201ENST00000360688 ANKARQ7Z5J8 1434 aa22.2■■□□□ 1.14
GDPD3-201ENST00000360688 NWD2Q9ULI1 1742 aa22.19■■□□□ 1.14
GDPD3-201ENST00000360688 PLEKHG5O94827 1062 aa22.18■■□□□ 1.14
GDPD3-201ENST00000360688 PMFBP1Q8TBY8 1022 aa22.18■■□□□ 1.14
GDPD3-201ENST00000360688 ARHGEF10O15013 1369 aa22.17■■□□□ 1.14
GDPD3-201ENST00000360688 LMOD2Q6P5Q4 547 aa22.17■■□□□ 1.14
GDPD3-201ENST00000360688 TRAK1Q9UPV9 953 aa22.17■■□□□ 1.14
GDPD3-201ENST00000360688 TRPM3Q9HCF6 1732 aaPredicted RBP22.16■■□□□ 1.14
GDPD3-201ENST00000360688 VPS72Q15906 364 aa22.15■■□□□ 1.14
GDPD3-201ENST00000360688 ZRANB1Q9UGI0 708 aa22.15■■□□□ 1.14
GDPD3-201ENST00000360688 HIRIP3Q9BW71 556 aaPredicted RBP22.14■■□□□ 1.14
GDPD3-201ENST00000360688 DCAF11Q8TEB1 546 aa22.13■■□□□ 1.13
GDPD3-201ENST00000360688 KDM2AQ9Y2K7 1162 aa22.13■■□□□ 1.13
GDPD3-201ENST00000360688 SEPT12Q8IYM1 358 aa22.12■■□□□ 1.13
GDPD3-201ENST00000360688 MINK1Q8N4C8 1332 aaPredicted RBP22.12■■□□□ 1.13
GDPD3-201ENST00000360688 ALS2Q96Q42 1657 aa22.12■■□□□ 1.13
GDPD3-201ENST00000360688 BLMP54132 1417 aaPredicted RBP22.12■■□□□ 1.13
GDPD3-201ENST00000360688 FAM83GA6ND36 823 aa22.11■■□□□ 1.13
GDPD3-201ENST00000360688 PRR36Q9H6K5 1346 aa22.11■■□□□ 1.13
GDPD3-201ENST00000360688 TULP4Q9NRJ4 1543 aa22.11■■□□□ 1.13
GDPD3-201ENST00000360688 ONECUT3O60422 494 aaPredicted RBP22.1■■□□□ 1.13
GDPD3-201ENST00000360688 CCDC9Q9Y3X0 531 aaKnown RBP22.09■■□□□ 1.13
GDPD3-201ENST00000360688 EIF3AQ14152 1382 aaKnown RBP22.09■■□□□ 1.13
GDPD3-201ENST00000360688 WASLO00401 505 aaPredicted RBP22.08■■□□□ 1.13
GDPD3-201ENST00000360688 GPRASP1Q5JY77 1395 aa22.08■■□□□ 1.13
GDPD3-201ENST00000360688 NRAPQ86VF7 1730 aa22.08■■□□□ 1.13
GDPD3-201ENST00000360688 STAC3Q96MF2 364 aa22.08■■□□□ 1.13
GDPD3-201ENST00000360688 ARHGEF28Q8N1W1 1705 aaKnown RBP22.07■■□□□ 1.12
GDPD3-201ENST00000360688 COL14A1Q05707 1796 aaKnown RBP22.06■■□□□ 1.12
GDPD3-201ENST00000360688 CRYBG1Q9Y4K1 1723 aa22.05■■□□□ 1.12
GDPD3-201ENST00000360688 KRT27Q7Z3Y8 459 aa22.05■■□□□ 1.12
GDPD3-201ENST00000360688 DEFB132Q7Z7B7 95 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms