RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PROSER2Q86WR7 435 aaPredicted RBP35.73■■■■□ 3.31
SSBP3-202ENST00000357475 NALCNQ8IZF0 1738 aa35.73■■■■□ 3.31
SSBP3-202ENST00000357475 LRRC7Q96NW7 1537 aa35.71■■■■□ 3.31
SSBP3-202ENST00000357475 MINK1Q8N4C8 1332 aaPredicted RBP35.7■■■■□ 3.31
SSBP3-202ENST00000357475 TMEM94Q12767 1356 aa35.68■■■■□ 3.3
SSBP3-202ENST00000357475 TULP4Q9NRJ4 1543 aa35.65■■■■□ 3.3
SSBP3-202ENST00000357475 SBNO2Q9Y2G9 1366 aa35.63■■■■□ 3.29
SSBP3-202ENST00000357475 ADGRB2O60241 1585 aa35.62■■■■□ 3.29
SSBP3-202ENST00000357475 DISP3Q9P2K9 1392 aa35.62■■■■□ 3.29
SSBP3-202ENST00000357475 C11orf95C9JLR9 678 aaPredicted RBP35.61■■■■□ 3.29
SSBP3-202ENST00000357475 ADGRL3Q9HAR2 1447 aa35.6■■■■□ 3.29
SSBP3-202ENST00000357475 C14orf37Q86TY3 774 aa35.57■■■■□ 3.28
SSBP3-202ENST00000357475 CDC42BPGQ6DT37 1551 aa35.53■■■■□ 3.28
SSBP3-202ENST00000357475 NCOA3Q9Y6Q9 1424 aa35.53■■■■□ 3.28
SSBP3-202ENST00000357475 TMF1P82094 1093 aa35.52■■■■□ 3.28
SSBP3-202ENST00000357475 FMN2Q9NZ56 1722 aa35.51■■■■□ 3.27
SSBP3-202ENST00000357475 WASLO00401 505 aaPredicted RBP35.51■■■■□ 3.27
SSBP3-202ENST00000357475 CDK19Q9BWU1 502 aa35.5■■■■□ 3.27
SSBP3-202ENST00000357475 EVC2Q86UK5 1308 aa35.5■■■■□ 3.27
SSBP3-202ENST00000357475 CABP2Q9NPB3 220 aa35.49■■■■□ 3.27
SSBP3-202ENST00000357475 USP32Q8NFA0 1604 aa35.47■■■■□ 3.27
SSBP3-202ENST00000357475 RGPD8O14715 1765 aaPredicted RBP35.47■■■■□ 3.27
SSBP3-202ENST00000357475 C19orf44Q9H6X5 657 aa35.47■■■■□ 3.27
SSBP3-202ENST00000357475 NUTM2FA1L443 756 aa35.46■■■■□ 3.27
SSBP3-202ENST00000357475 KIF7Q2M1P5 1343 aa35.46■■■■□ 3.27
SSBP3-202ENST00000357475 WASHC2AQ641Q2 1341 aa35.45■■■■□ 3.27
SSBP3-202ENST00000357475 MSH6P52701 1360 aa35.44■■■■□ 3.26
SSBP3-202ENST00000357475 ZNF316A6NFI3 1004 aaPredicted RBP35.44■■■■□ 3.26
SSBP3-202ENST00000357475 SRPK2P78362 688 aaKnown RBP35.44■■■■□ 3.26
SSBP3-202ENST00000357475 POLR3GLQ9BT43 218 aa35.42■■■■□ 3.26
SSBP3-202ENST00000357475 PRR36Q9H6K5 1346 aa35.42■■■■□ 3.26
SSBP3-202ENST00000357475 CCDC7Q96M83 1385 aa35.41■■■■□ 3.26
SSBP3-202ENST00000357475 ATP7BP35670 1465 aa35.4■■■■□ 3.26
SSBP3-202ENST00000357475 DCCP43146 1447 aa35.39■■■■□ 3.26
SSBP3-202ENST00000357475 MYOM1P52179 1685 aa35.38■■■■□ 3.25
SSBP3-202ENST00000357475 SLC24A1O60721 1099 aa35.38■■■■□ 3.25
SSBP3-202ENST00000357475 TOPAZ1Q8N9V7 1692 aa35.36■■■■□ 3.25
SSBP3-202ENST00000357475 ATF3P18847 181 aa35.36■■■■□ 3.25
SSBP3-202ENST00000357475 NUDT16Q96DE0 195 aaKnown RBP35.35■■■■□ 3.25
SSBP3-202ENST00000357475 MST1RQ04912 1400 aa35.35■■■■□ 3.25
SSBP3-202ENST00000357475 CDCA8Q53HL2 280 aa35.32■■■■□ 3.24
SSBP3-202ENST00000357475 ANKARQ7Z5J8 1434 aa35.31■■■■□ 3.24
SSBP3-202ENST00000357475 CADPS2Q86UW7 1296 aa35.31■■■■□ 3.24
SSBP3-202ENST00000357475 CERKQ8TCT0 537 aa35.3■■■■□ 3.24
SSBP3-202ENST00000357475 ITSN1Q15811 1721 aa35.29■■■■□ 3.24
SSBP3-202ENST00000357475 PUS7Q96PZ0 661 aaKnown RBP35.29■■■■□ 3.24
SSBP3-202ENST00000357475 ATAD2Q6PL18 1390 aa35.29■■■■□ 3.24
SSBP3-202ENST00000357475 C1orf167Q5SNV9 1468 aa35.29■■■■□ 3.24
SSBP3-202ENST00000357475 PPIP5K1Q6PFW1 1433 aa35.26■■■■□ 3.24
SSBP3-202ENST00000357475 SLC12A5Q9H2X9 1139 aa35.26■■■■□ 3.23
SSBP3-202ENST00000357475 TMC1Q8TDI8 760 aa35.25■■■■□ 3.23
SSBP3-202ENST00000357475 CABP1Q9NZU7 370 aa35.25■■■■□ 3.23
SSBP3-202ENST00000357475 ORAI2Q96SN7 254 aa35.24■■■■□ 3.23
SSBP3-202ENST00000357475 CCDC61Q9Y6R9 512 aa35.24■■■■□ 3.23
SSBP3-202ENST00000357475 IQSEC2Q5JU85 1478 aa35.23■■■■□ 3.23
SSBP3-202ENST00000357475 SLAIN2Q9P270 581 aa35.22■■■■□ 3.23
SSBP3-202ENST00000357475 ESCO1Q5FWF5 840 aa35.21■■■■□ 3.23
SSBP3-202ENST00000357475 PMFBP1Q8TBY8 1022 aa35.2■■■■□ 3.23
SSBP3-202ENST00000357475 CD163L1Q9NR16 1453 aa35.2■■■■□ 3.22
SSBP3-202ENST00000357475 AKAP12Q02952 1782 aa35.16■■■■□ 3.22
SSBP3-202ENST00000357475 DDX10Q13206 875 aaKnown RBP35.15■■■■□ 3.22
SSBP3-202ENST00000357475 PHF8Q9UPP1 1060 aa35.15■■■■□ 3.22
SSBP3-202ENST00000357475 PLEKHG3A1L390 1219 aa35.14■■■■□ 3.22
SSBP3-202ENST00000357475 KIF1AQ12756 1690 aa35.13■■■■□ 3.21
SSBP3-202ENST00000357475 NINLQ9Y2I6 1382 aa35.13■■■■□ 3.21
SSBP3-202ENST00000357475 BRINP3Q76B58 766 aa35.12■■■■□ 3.21
SSBP3-202ENST00000357475 ACEP12821 1306 aa35.12■■■■□ 3.21
SSBP3-202ENST00000357475 ROBO1Q9Y6N7 1651 aa35.12■■■■□ 3.21
SSBP3-202ENST00000357475 A0A1W2PP64 1363 aa35.11■■■■□ 3.21
SSBP3-202ENST00000357475 UBAP1LF5GYI3 381 aa35.11■■■■□ 3.21
SSBP3-202ENST00000357475 PANK3Q9H999 370 aa35.11■■■■□ 3.21
SSBP3-202ENST00000357475 CPSF1Q10570 1443 aaKnown RBP35.09■■■■□ 3.21
SSBP3-202ENST00000357475 MON2Q7Z3U7 1717 aa35.08■■■■□ 3.21
SSBP3-202ENST00000357475 DDX17Q92841 729 aaKnown RBP35.08■■■■□ 3.21
SSBP3-202ENST00000357475 POLR3AO14802 1390 aaPredicted RBP35.08■■■■□ 3.21
SSBP3-202ENST00000357475 ANKRD36BQ8N2N9 1353 aa35.08■■■■□ 3.21
SSBP3-202ENST00000357475 TOM1O60784 492 aa35.07■■■■□ 3.21
SSBP3-202ENST00000357475 NGDNQ8NEJ9 315 aaKnown RBP35.06■■■■□ 3.2
SSBP3-202ENST00000357475 CARD14Q9BXL6 1004 aa35.06■■■■□ 3.2
SSBP3-202ENST00000357475 FOXO3O43524 673 aa35.05■■■■□ 3.2
SSBP3-202ENST00000357475 PIP4K2BP78356 416 aa35.04■■■■□ 3.2
SSBP3-202ENST00000357475 TERF2IPQ9NYB0 399 aa35.02■■■■□ 3.2
SSBP3-202ENST00000357475 NRKQ7Z2Y5 1582 aa35.02■■■■□ 3.2
SSBP3-202ENST00000357475 XPCQ01831 940 aaPredicted RBP35.01■■■■□ 3.2
SSBP3-202ENST00000357475 KTN1Q86UP2 1357 aaKnown RBP35.01■■■■□ 3.2
SSBP3-202ENST00000357475 NHSL1Q5SYE7 1610 aa35.01■■■■□ 3.2
SSBP3-202ENST00000357475 HDGFL2Q7Z4V5 671 aaPredicted RBP35.01■■■■□ 3.19
SSBP3-202ENST00000357475 USP6P35125 1406 aa34.99■■■■□ 3.19
SSBP3-202ENST00000357475 SCAF1Q9H7N4 1312 aaKnown RBP34.98■■■■□ 3.19
SSBP3-202ENST00000357475 NSD3Q9BZ95 1437 aa34.97■■■■□ 3.19
SSBP3-202ENST00000357475 TRPM3Q9HCF6 1732 aaPredicted RBP34.96■■■■□ 3.19
SSBP3-202ENST00000357475 PXDNQ92626 1479 aa34.95■■■■□ 3.19
SSBP3-202ENST00000357475 SSH2Q76I76 1423 aa34.95■■■■□ 3.19
SSBP3-202ENST00000357475 PER1O15534 1290 aaPredicted RBP34.95■■■■□ 3.19
SSBP3-202ENST00000357475 ZNF692Q9BU19 519 aaPredicted RBP34.95■■■■□ 3.19
SSBP3-202ENST00000357475 PSME1Q06323 249 aa34.94■■■■□ 3.18
SSBP3-202ENST00000357475 NPHP3Q7Z494 1330 aa34.92■■■■□ 3.18
SSBP3-202ENST00000357475 KRT28Q7Z3Y7 464 aa34.91■■■■□ 3.18
SSBP3-202ENST00000357475 EDC4Q6P2E9 1401 aaKnown RBP34.91■■■■□ 3.18
SSBP3-202ENST00000357475 AHDC1Q5TGY3 1603 aaPredicted RBP34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms