RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 GRPEL1Q9HAV7 217 aa18.94■□□□□ 0.62
TRAPPC11-202ENST00000357207 EHBP1L1Q8N3D4 1523 aa18.94■□□□□ 0.62
TRAPPC11-202ENST00000357207 NEK4P51957 841 aa18.94■□□□□ 0.62
TRAPPC11-202ENST00000357207 CABP2Q9NPB3 220 aa18.94■□□□□ 0.62
TRAPPC11-202ENST00000357207 WDR63Q8IWG1 891 aa18.93■□□□□ 0.62
TRAPPC11-202ENST00000357207 TOMM22Q9NS69 142 aa18.93■□□□□ 0.62
TRAPPC11-202ENST00000357207 CCAR2Q8N163 923 aaKnown RBP18.93■□□□□ 0.62
TRAPPC11-202ENST00000357207 TSR2Q969E8 191 aaKnown RBP18.93■□□□□ 0.62
TRAPPC11-202ENST00000357207 SLFN5Q08AF3 891 aa18.92■□□□□ 0.62
TRAPPC11-202ENST00000357207 SASS6Q6UVJ0 657 aa18.92■□□□□ 0.62
TRAPPC11-202ENST00000357207 RASSF8Q8NHQ8 419 aa18.92■□□□□ 0.62
TRAPPC11-202ENST00000357207 CCDC9Q9Y3X0 531 aaKnown RBP18.92■□□□□ 0.62
TRAPPC11-202ENST00000357207 MVPQ14764 893 aaKnown RBP18.92■□□□□ 0.62
TRAPPC11-202ENST00000357207 SLC12A5Q9H2X9 1139 aa18.91■□□□□ 0.62
TRAPPC11-202ENST00000357207 TSPYL4Q9UJ04 414 aa18.91■□□□□ 0.62
TRAPPC11-202ENST00000357207 ESPNB1AK53 854 aa18.91■□□□□ 0.62
TRAPPC11-202ENST00000357207 MCM2P49736 904 aa18.91■□□□□ 0.62
TRAPPC11-202ENST00000357207 NEXNQ0ZGT2 675 aa18.91■□□□□ 0.62
TRAPPC11-202ENST00000357207 HSP90AB4PQ58FF6 505 aa18.91■□□□□ 0.62
TRAPPC11-202ENST00000357207 CPLX2Q6PUV4 134 aaKnown RBP18.91■□□□□ 0.62
TRAPPC11-202ENST00000357207 CT47B1P0C2W7 299 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC11-202ENST00000357207 IFT57Q9NWB7 429 aa18.91■□□□□ 0.62
TRAPPC11-202ENST00000357207 NOB1Q9ULX3 412 aaKnown RBP18.91■□□□□ 0.62
TRAPPC11-202ENST00000357207 ATF7IPQ6VMQ6 1270 aa18.9■□□□□ 0.62
TRAPPC11-202ENST00000357207 CIZ1Q9ULV3 898 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC11-202ENST00000357207 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.624e-6■■■□□ 18.2
TRAPPC11-202ENST00000357207 PRDM2Q13029 1718 aa18.89■□□□□ 0.62
TRAPPC11-202ENST00000357207 SKAP1Q86WV1 359 aa18.89■□□□□ 0.62
TRAPPC11-202ENST00000357207 SCAPERQ9BY12 1400 aa18.89■□□□□ 0.61
TRAPPC11-202ENST00000357207 PRKAR2BP31323 418 aa18.89■□□□□ 0.61
TRAPPC11-202ENST00000357207 HOMER1Q86YM7 354 aa18.89■□□□□ 0.61
TRAPPC11-202ENST00000357207 NOC3LQ8WTT2 800 aaKnown RBP18.89■□□□□ 0.61
TRAPPC11-202ENST00000357207 K7ELQ4 463 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC11-202ENST00000357207 C1orf115Q9H7X2 142 aa18.88■□□□□ 0.61
TRAPPC11-202ENST00000357207 ERC2O15083 957 aa18.88■□□□□ 0.61
TRAPPC11-202ENST00000357207 ERBINQ96RT1 1412 aa18.88■□□□□ 0.61
TRAPPC11-202ENST00000357207 G3BP1Q13283 466 aaKnown RBP eCLIP18.88■□□□□ 0.61
TRAPPC11-202ENST00000357207 C1orf141Q5JVX7 400 aa18.88■□□□□ 0.61
TRAPPC11-202ENST00000357207 C20orf194Q5TEA3 1177 aa18.88■□□□□ 0.61
TRAPPC11-202ENST00000357207 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC11-202ENST00000357207 GPS2Q13227 327 aa18.87■□□□□ 0.61
TRAPPC11-202ENST00000357207 C9orf84Q5VXU9 1444 aa18.87■□□□□ 0.61
TRAPPC11-202ENST00000357207 CWC22Q9HCG8 908 aaKnown RBP18.87■□□□□ 0.61
TRAPPC11-202ENST00000357207 HMGN5P82970 282 aaKnown RBP18.86■□□□□ 0.61
TRAPPC11-202ENST00000357207 TWISTNBQ3B726 338 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC11-202ENST00000357207 CCDC73Q6ZRK6 1079 aa18.86■□□□□ 0.61
TRAPPC11-202ENST00000357207 TPD52L1Q16890 204 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC11-202ENST00000357207 DAPK1P53355 1430 aa18.86■□□□□ 0.61
TRAPPC11-202ENST00000357207 ANKRD30BQ9BXX2 1392 aa18.86■□□□□ 0.61
TRAPPC11-202ENST00000357207 LRRFIP1Q32MZ4 808 aaKnown RBP18.86■□□□□ 0.61
TRAPPC11-202ENST00000357207 AFAP1Q8N556 730 aa18.86■□□□□ 0.61
TRAPPC11-202ENST00000357207 TSPY26PQ9H489 355 aa18.86■□□□□ 0.61
TRAPPC11-202ENST00000357207 CPLX1O14810 134 aa18.86■□□□□ 0.61
TRAPPC11-202ENST00000357207 GNAI3P08754 354 aa18.86■□□□□ 0.61
TRAPPC11-202ENST00000357207 TPM1P09493 284 aa18.85■□□□□ 0.61
TRAPPC11-202ENST00000357207 UBTFL1P0CB47 393 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC11-202ENST00000357207 PES1O00541 588 aaKnown RBP18.84■□□□□ 0.61
TRAPPC11-202ENST00000357207 TSR1Q2NL82 804 aaKnown RBP18.84■□□□□ 0.61
TRAPPC11-202ENST00000357207 WWC1Q8IX03 1113 aa18.84■□□□□ 0.61
TRAPPC11-202ENST00000357207 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC11-202ENST00000357207 LETM1O95202 739 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC11-202ENST00000357207 CHD1LQ86WJ1 897 aa18.84■□□□□ 0.61
TRAPPC11-202ENST00000357207 NCOA1Q15788 1441 aa18.84■□□□□ 0.61
TRAPPC11-202ENST00000357207 RBM10P98175 930 aaKnown RBP18.83■□□□□ 0.61
TRAPPC11-202ENST00000357207 A0A0U1RQG5 324 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC11-202ENST00000357207 DDX58O95786 925 aaKnown RBP18.83■□□□□ 0.6
TRAPPC11-202ENST00000357207 TROQ12816 1431 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC11-202ENST00000357207 TEX35Q5T0J7 233 aa18.82■□□□□ 0.6
TRAPPC11-202ENST00000357207 SURF6O75683 361 aaKnown RBP18.81■□□□□ 0.6
TRAPPC11-202ENST00000357207 PRG4Q92954 1404 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC11-202ENST00000357207 SYNE3Q6ZMZ3 975 aa18.81■□□□□ 0.6
TRAPPC11-202ENST00000357207 TRIM5Q9C035 493 aa18.81■□□□□ 0.6
TRAPPC11-202ENST00000357207 AKAP17AQ02040 695 aaKnown RBP18.8■□□□□ 0.6
TRAPPC11-202ENST00000357207 CCDC27Q2M243 656 aa18.8■□□□□ 0.6
TRAPPC11-202ENST00000357207 TRIM29Q14134 588 aa18.8■□□□□ 0.6
TRAPPC11-202ENST00000357207 CLASRPQ8N2M8 674 aaKnown RBP18.8■□□□□ 0.6
TRAPPC11-202ENST00000357207 FIBPO43427 364 aa18.8■□□□□ 0.6
TRAPPC11-202ENST00000357207 CNTROBQ8N137 903 aa18.8■□□□□ 0.6
TRAPPC11-202ENST00000357207 RRP9O43818 475 aaKnown RBP18.79■□□□□ 0.6
TRAPPC11-202ENST00000357207 PDCP20941 246 aa18.79■□□□□ 0.6
TRAPPC11-202ENST00000357207 SDF4Q9BRK5 362 aa18.79■□□□□ 0.6
TRAPPC11-202ENST00000357207 CLSTN1O94985 981 aa18.78■□□□□ 0.6
TRAPPC11-202ENST00000357207 MNS1Q8NEH6 495 aa18.78■□□□□ 0.6
TRAPPC11-202ENST00000357207 ARGLU1Q9NWB6 273 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC11-202ENST00000357207 MAP3K1Q13233 1512 aa18.78■□□□□ 0.6
TRAPPC11-202ENST00000357207 PSMA5P28066 241 aa18.78■□□□□ 0.6
TRAPPC11-202ENST00000357207 FBXW7Q969H0 707 aa18.78■□□□□ 0.6
TRAPPC11-202ENST00000357207 SUPT6HQ7KZ85 1726 aaKnown RBP18.78■□□□□ 0.6
TRAPPC11-202ENST00000357207 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
TRAPPC11-202ENST00000357207 TRDNQ13061 729 aa18.77■□□□□ 0.59
TRAPPC11-202ENST00000357207 ZNF428Q96B54 188 aa18.76■□□□□ 0.59
TRAPPC11-202ENST00000357207 GNAI2P04899 355 aa18.75■□□□□ 0.59
TRAPPC11-202ENST00000357207 ZSCAN30Q86W11 494 aa18.75■□□□□ 0.59
TRAPPC11-202ENST00000357207 TTC5Q8N0Z6 440 aa18.75■□□□□ 0.59
TRAPPC11-202ENST00000357207 PKNOX2Q96KN3 472 aa18.75■□□□□ 0.59
TRAPPC11-202ENST00000357207 HOOK1Q9UJC3 728 aaKnown RBP18.75■□□□□ 0.59
TRAPPC11-202ENST00000357207 ARHGAP5Q13017 1502 aa18.75■□□□□ 0.59
TRAPPC11-202ENST00000357207 RARSP54136 660 aaKnown RBP18.75■□□□□ 0.59
TRAPPC11-202ENST00000357207 WDR33Q9C0J8 1336 aaKnown RBP18.75■□□□□ 0.59
TRAPPC11-202ENST00000357207 IPO7O95373 1038 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms