RNA–Protein interactions for RNA: ENST00000356545.6

RSPO1-201, Transcript of R-spondin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO1, Length 2,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1-201ENST00000356545 MYOM2P54296 1465 aa26.88■■□□□ 1.89
RSPO1-201ENST00000356545 VWDEQ8N2E2 1590 aa26.88■■□□□ 1.89
RSPO1-201ENST00000356545 NSD3Q9BZ95 1437 aa26.87■■□□□ 1.89
RSPO1-201ENST00000356545 TBC1D32Q96NH3 1257 aa26.87■■□□□ 1.89
RSPO1-201ENST00000356545 SLC12A5Q9H2X9 1139 aa26.86■■□□□ 1.89
RSPO1-201ENST00000356545 SHPRHQ149N8 1683 aa26.86■■□□□ 1.89
RSPO1-201ENST00000356545 IQSEC2Q5JU85 1478 aa26.85■■□□□ 1.89
RSPO1-201ENST00000356545 SBNO2Q9Y2G9 1366 aa26.84■■□□□ 1.89
RSPO1-201ENST00000356545 TBC1D2Q9BYX2 928 aa26.84■■□□□ 1.89
RSPO1-201ENST00000356545 NEURL4Q96JN8 1562 aa26.84■■□□□ 1.89
RSPO1-201ENST00000356545 FAM43AQ8N2R8 423 aa26.83■■□□□ 1.89
RSPO1-201ENST00000356545 WDR63Q8IWG1 891 aa26.83■■□□□ 1.88
RSPO1-201ENST00000356545 AAMPQ13685 434 aa26.82■■□□□ 1.88
RSPO1-201ENST00000356545 UPF2Q9HAU5 1272 aaKnown RBP26.81■■□□□ 1.88
RSPO1-201ENST00000356545 MTHFSP49914 203 aa26.8■■□□□ 1.88
RSPO1-201ENST00000356545 TRAK1Q9UPV9 953 aa26.8■■□□□ 1.88
RSPO1-201ENST00000356545 ATP7AQ04656 1500 aa26.79■■□□□ 1.88
RSPO1-201ENST00000356545 ZMYM3Q14202 1370 aa26.78■■□□□ 1.88
RSPO1-201ENST00000356545 NRXN1Q9ULB1 1477 aa26.78■■□□□ 1.88
RSPO1-201ENST00000356545 RWDD1Q9H446 243 aaPredicted RBP26.78■■□□□ 1.88
RSPO1-201ENST00000356545 MYO3AQ8NEV4 1616 aa26.77■■□□□ 1.88
RSPO1-201ENST00000356545 MROH1Q8NDA8 1641 aa26.76■■□□□ 1.87
RSPO1-201ENST00000356545 CCDC27Q2M243 656 aa26.76■■□□□ 1.87
RSPO1-201ENST00000356545 UHRF1BP1LA0JNW5 1464 aa26.76■■□□□ 1.87
RSPO1-201ENST00000356545 NOS1P29475 1434 aa26.75■■□□□ 1.87
RSPO1-201ENST00000356545 SPRYD3Q8NCJ5 442 aa26.74■■□□□ 1.87
RSPO1-201ENST00000356545 INO80Q9ULG1 1556 aaPredicted RBP26.74■■□□□ 1.87
RSPO1-201ENST00000356545 ARAP3Q8WWN8 1544 aa26.74■■□□□ 1.87
RSPO1-201ENST00000356545 ZNF518AQ6AHZ1 1483 aa26.74■■□□□ 1.87
RSPO1-201ENST00000356545 MVPQ14764 893 aaKnown RBP26.73■■□□□ 1.87
RSPO1-201ENST00000356545 MROH2AA6NES4 1674 aa26.73■■□□□ 1.87
RSPO1-201ENST00000356545 IFT172Q9UG01 1749 aa26.72■■□□□ 1.87
RSPO1-201ENST00000356545 EIF5BO60841 1220 aaKnown RBP26.72■■□□□ 1.87
RSPO1-201ENST00000356545 CHGAP10645 457 aaKnown RBP26.71■■□□□ 1.87
RSPO1-201ENST00000356545 TMEM132EQ6IEE7 984 aa26.71■■□□□ 1.87
RSPO1-201ENST00000356545 KIF1BO60333 1816 aa26.71■■□□□ 1.87
RSPO1-201ENST00000356545 MYH16Q9H6N6 1097 aa26.7■■□□□ 1.87
RSPO1-201ENST00000356545 FANCAO15360 1455 aa26.69■■□□□ 1.86
RSPO1-201ENST00000356545 EFCAB6Q5THR3 1501 aa26.69■■□□□ 1.86
RSPO1-201ENST00000356545 ZKSCAN2Q63HK3 967 aa26.68■■□□□ 1.86
RSPO1-201ENST00000356545 CFAP53Q96M91 514 aa26.68■■□□□ 1.86
RSPO1-201ENST00000356545 C14orf93Q9H972 538 aaKnown RBP26.68■■□□□ 1.86
RSPO1-201ENST00000356545 RRAGDQ9NQL2 400 aaPredicted RBP26.68■■□□□ 1.86
RSPO1-201ENST00000356545 U2AF1L5P0DN76 240 aaPredicted RBP26.68■■□□□ 1.86
RSPO1-201ENST00000356545 U2AF1Q01081 240 aaKnown RBP eCLIP26.68■■□□□ 1.86
RSPO1-201ENST00000356545 TSR2Q969E8 191 aaKnown RBP26.68■■□□□ 1.86
RSPO1-201ENST00000356545 L1TD1Q5T7N2 865 aaKnown RBP26.67■■□□□ 1.86
RSPO1-201ENST00000356545 DZIP1LQ8IYY4 767 aaKnown RBP26.67■■□□□ 1.86
RSPO1-201ENST00000356545 FTSJ3Q8IY81 847 aaKnown RBP26.66■■□□□ 1.86
RSPO1-201ENST00000356545 SETBP1Q9Y6X0 1596 aa26.65■■□□□ 1.86
RSPO1-201ENST00000356545 ARXQ96QS3 562 aa26.65■■□□□ 1.86
RSPO1-201ENST00000356545 MCM4P33991 863 aa26.65■■□□□ 1.86
RSPO1-201ENST00000356545 C22orf23Q9BZE7 217 aa26.65■■□□□ 1.86
RSPO1-201ENST00000356545 PPRC1Q5VV67 1664 aaKnown RBP26.64■■□□□ 1.85
RSPO1-201ENST00000356545 MFAP1P55081 439 aaKnown RBP26.64■■□□□ 1.85
RSPO1-201ENST00000356545 RSPH6AQ9H0K4 717 aa26.64■■□□□ 1.85
RSPO1-201ENST00000356545 ADGRB1O14514 1584 aa26.63■■□□□ 1.85
RSPO1-201ENST00000356545 ADGRB3O60242 1522 aa26.63■■□□□ 1.85
RSPO1-201ENST00000356545 XRCC6P12956 609 aaKnown RBP eCLIP26.63■■□□□ 1.85
RSPO1-201ENST00000356545 ADGRL1O94910 1474 aa26.62■■□□□ 1.85
RSPO1-201ENST00000356545 TRIM27P14373 513 aa26.62■■□□□ 1.85
RSPO1-201ENST00000356545 QRICH2Q9H0J4 1663 aa26.62■■□□□ 1.85
RSPO1-201ENST00000356545 NCBP3Q53F19 620 aaKnown RBP26.61■■□□□ 1.85
RSPO1-201ENST00000356545 GZF1Q9H116 711 aaPredicted RBP26.61■■□□□ 1.85
RSPO1-201ENST00000356545 EXOSC9Q06265 439 aaKnown RBP26.61■■□□□ 1.85
RSPO1-201ENST00000356545 SMC4Q9NTJ3 1288 aa26.61■■□□□ 1.85
RSPO1-201ENST00000356545 ABCA9Q8IUA7 1624 aa26.6■■□□□ 1.85
RSPO1-201ENST00000356545 FSD2A1L4K1 749 aa26.6■■□□□ 1.85
RSPO1-201ENST00000356545 ZC3H13Q5T200 1668 aaKnown RBP26.6■■□□□ 1.85
RSPO1-201ENST00000356545 SSH1Q8WYL5 1049 aa26.59■■□□□ 1.85
RSPO1-201ENST00000356545 USP32Q8NFA0 1604 aa26.59■■□□□ 1.85
RSPO1-201ENST00000356545 HDAC1Q13547 482 aaPredicted RBP26.58■■□□□ 1.85
RSPO1-201ENST00000356545 CHMP5Q9NZZ3 219 aa26.57■■□□□ 1.84
RSPO1-201ENST00000356545 GOLGA6L3A6NEY3 463 aa26.57■■□□□ 1.84
RSPO1-201ENST00000356545 ITPRIPQ8IWB1 547 aa26.56■■□□□ 1.84
RSPO1-201ENST00000356545 PANK2Q9BZ23 570 aa26.56■■□□□ 1.84
RSPO1-201ENST00000356545 CT47B1P0C2W7 299 aaPredicted RBP26.56■■□□□ 1.84
RSPO1-201ENST00000356545 CD109Q6YHK3 1445 aa26.56■■□□□ 1.84
RSPO1-201ENST00000356545 ADGRB2O60241 1585 aa26.56■■□□□ 1.84
RSPO1-201ENST00000356545 TRIM35Q9UPQ4 493 aa26.55■■□□□ 1.84
RSPO1-201ENST00000356545 PLEKHF1Q96S99 279 aa26.55■■□□□ 1.84
RSPO1-201ENST00000356545 ANKRD36BQ8N2N9 1353 aa26.55■■□□□ 1.84
RSPO1-201ENST00000356545 LMTK2Q8IWU2 1503 aa26.54■■□□□ 1.84
RSPO1-201ENST00000356545 ATF7IPQ6VMQ6 1270 aa26.53■■□□□ 1.84
RSPO1-201ENST00000356545 SMC5Q8IY18 1101 aa26.53■■□□□ 1.84
RSPO1-201ENST00000356545 DDX19BQ9UMR2 479 aa26.53■■□□□ 1.84
RSPO1-201ENST00000356545 NPATQ14207 1427 aa26.53■■□□□ 1.84
RSPO1-201ENST00000356545 TMPOP42166 694 aaKnown RBP26.53■■□□□ 1.84
RSPO1-201ENST00000356545 CABP2Q9NPB3 220 aa26.53■■□□□ 1.84
RSPO1-201ENST00000356545 TRAK2O60296 914 aa26.52■■□□□ 1.84
RSPO1-201ENST00000356545 NUTM2DQ5VT03 806 aaPredicted RBP26.52■■□□□ 1.84
RSPO1-201ENST00000356545 ZNF692Q9BU19 519 aaPredicted RBP26.52■■□□□ 1.84
RSPO1-201ENST00000356545 NOB1Q9ULX3 412 aaKnown RBP26.52■■□□□ 1.84
RSPO1-201ENST00000356545 U2SURPO15042 1029 aaKnown RBP26.52■■□□□ 1.84
RSPO1-201ENST00000356545 EVC2Q86UK5 1308 aa26.51■■□□□ 1.84
RSPO1-201ENST00000356545 NSD2O96028 1365 aa26.51■■□□□ 1.83
RSPO1-201ENST00000356545 CFAP65Q6ZU64 1925 aaKnown RBP26.51■■□□□ 1.83
RSPO1-201ENST00000356545 TMEM57Q8N5G2 664 aa26.51■■□□□ 1.83
RSPO1-201ENST00000356545 TULP4Q9NRJ4 1543 aa26.51■■□□□ 1.83
RSPO1-201ENST00000356545 PPLO60437 1756 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms