RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 SBNO2Q9Y2G9 1366 aa33.5■■■□□ 2.95
CHKA-202ENST00000356135 RBM33Q96EV2 1170 aaKnown RBP33.5■■■□□ 2.95
CHKA-202ENST00000356135 PTCH1Q13635 1447 aa33.48■■■□□ 2.95
CHKA-202ENST00000356135 DDX10Q13206 875 aaKnown RBP33.46■■■□□ 2.95
CHKA-202ENST00000356135 DMRT2Q9Y5R5 561 aa33.44■■■□□ 2.94
CHKA-202ENST00000356135 NWD1Q149M9 1564 aa33.42■■■□□ 2.94
CHKA-202ENST00000356135 SLC24A1O60721 1099 aa33.42■■■□□ 2.94
CHKA-202ENST00000356135 TULP4Q9NRJ4 1543 aa33.42■■■□□ 2.94
CHKA-202ENST00000356135 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.42■■■□□ 2.94
CHKA-202ENST00000356135 STRCP1A6NGW2 1772 aa33.41■■■□□ 2.94
CHKA-202ENST00000356135 EVC2Q86UK5 1308 aa33.41■■■□□ 2.94
CHKA-202ENST00000356135 ZNF335Q9H4Z2 1342 aaPredicted RBP33.4■■■□□ 2.94
CHKA-202ENST00000356135 CABP2Q9NPB3 220 aa33.39■■■□□ 2.94
CHKA-202ENST00000356135 PROSER2Q86WR7 435 aaPredicted RBP33.39■■■□□ 2.94
CHKA-202ENST00000356135 CDK19Q9BWU1 502 aa33.39■■■□□ 2.94
CHKA-202ENST00000356135 CDCA8Q53HL2 280 aa33.37■■■□□ 2.93
CHKA-202ENST00000356135 SRPK2P78362 688 aaKnown RBP33.36■■■□□ 2.93
CHKA-202ENST00000356135 WASLO00401 505 aaPredicted RBP33.34■■■□□ 2.93
CHKA-202ENST00000356135 NKTRP30414 1462 aaKnown RBP33.31■■■□□ 2.92
CHKA-202ENST00000356135 NUTM2FA1L443 756 aa33.28■■■□□ 2.92
CHKA-202ENST00000356135 C14orf37Q86TY3 774 aa33.28■■■□□ 2.92
CHKA-202ENST00000356135 TMEM94Q12767 1356 aa33.26■■■□□ 2.92
CHKA-202ENST00000356135 ADGRB2O60241 1585 aa33.26■■■□□ 2.91
CHKA-202ENST00000356135 TMC1Q8TDI8 760 aa33.24■■■□□ 2.91
CHKA-202ENST00000356135 PUS7Q96PZ0 661 aaKnown RBP33.24■■■□□ 2.91
CHKA-202ENST00000356135 NALCNQ8IZF0 1738 aa33.24■■■□□ 2.91
CHKA-202ENST00000356135 SLC12A5Q9H2X9 1139 aa33.24■■■□□ 2.91
CHKA-202ENST00000356135 ADGRL3Q9HAR2 1447 aa33.21■■■□□ 2.91
CHKA-202ENST00000356135 PRR36Q9H6K5 1346 aa33.21■■■□□ 2.91
CHKA-202ENST00000356135 NUDT16Q96DE0 195 aaKnown RBP33.2■■■□□ 2.91
CHKA-202ENST00000356135 PANK3Q9H999 370 aa33.19■■■□□ 2.9
CHKA-202ENST00000356135 LRRC7Q96NW7 1537 aa33.19■■■□□ 2.9
CHKA-202ENST00000356135 MYOM1P52179 1685 aa33.19■■■□□ 2.9
CHKA-202ENST00000356135 ATAD2Q6PL18 1390 aa33.17■■■□□ 2.9
CHKA-202ENST00000356135 CABP1Q9NZU7 370 aa33.16■■■□□ 2.9
CHKA-202ENST00000356135 C19orf44Q9H6X5 657 aa33.15■■■□□ 2.9
CHKA-202ENST00000356135 ATP7BP35670 1465 aa33.13■■■□□ 2.89
CHKA-202ENST00000356135 CCDC61Q9Y6R9 512 aa33.12■■■□□ 2.89
CHKA-202ENST00000356135 XIRP1Q702N8 1843 aaKnown RBP33.12■■■□□ 2.89
CHKA-202ENST00000356135 CDC42BPGQ6DT37 1551 aa33.12■■■□□ 2.89
CHKA-202ENST00000356135 NCOA3Q9Y6Q9 1424 aa33.11■■■□□ 2.89
CHKA-202ENST00000356135 USP32Q8NFA0 1604 aa33.1■■■□□ 2.89
CHKA-202ENST00000356135 PPIP5K1Q6PFW1 1433 aa33.09■■■□□ 2.89
CHKA-202ENST00000356135 FMN2Q9NZ56 1722 aa33.09■■■□□ 2.89
CHKA-202ENST00000356135 PER1O15534 1290 aaPredicted RBP33.06■■■□□ 2.88
CHKA-202ENST00000356135 CARD14Q9BXL6 1004 aa33.06■■■□□ 2.88
CHKA-202ENST00000356135 LTBP4Q8N2S1 1624 aa33.06■■■□□ 2.88
CHKA-202ENST00000356135 RGPD8O14715 1765 aaPredicted RBP33.05■■■□□ 2.88
CHKA-202ENST00000356135 MSH6P52701 1360 aa33.05■■■□□ 2.88
CHKA-202ENST00000356135 ATF3P18847 181 aa33.05■■■□□ 2.88
CHKA-202ENST00000356135 CNGB1Q14028 1251 aaPredicted RBP33.05■■■□□ 2.88
CHKA-202ENST00000356135 PMFBP1Q8TBY8 1022 aa33.04■■■□□ 2.88
CHKA-202ENST00000356135 CD163L1Q9NR16 1453 aa33.03■■■□□ 2.88
CHKA-202ENST00000356135 NINLQ9Y2I6 1382 aa33.03■■■□□ 2.88
CHKA-202ENST00000356135 MIER1Q8N108 512 aa33.03■■■□□ 2.88
CHKA-202ENST00000356135 ANKARQ7Z5J8 1434 aa33.02■■■□□ 2.88
CHKA-202ENST00000356135 A0A1W2PP64 1363 aa33.01■■■□□ 2.87
CHKA-202ENST00000356135 ANKRD36BQ8N2N9 1353 aa33.01■■■□□ 2.87
CHKA-202ENST00000356135 TOPAZ1Q8N9V7 1692 aa32.99■■■□□ 2.87
CHKA-202ENST00000356135 TERF2IPQ9NYB0 399 aa32.99■■■□□ 2.87
CHKA-202ENST00000356135 PLEKHG3A1L390 1219 aa32.98■■■□□ 2.87
CHKA-202ENST00000356135 CADPS2Q86UW7 1296 aa32.98■■■□□ 2.87
CHKA-202ENST00000356135 ESCO1Q5FWF5 840 aa32.98■■■□□ 2.87
CHKA-202ENST00000356135 ORAI2Q96SN7 254 aa32.98■■■□□ 2.87
CHKA-202ENST00000356135 ACEP12821 1306 aa32.97■■■□□ 2.87
CHKA-202ENST00000356135 DCCP43146 1447 aa32.97■■■□□ 2.87
CHKA-202ENST00000356135 HDGFL2Q7Z4V5 671 aaPredicted RBP32.97■■■□□ 2.87
CHKA-202ENST00000356135 KNSTRNQ9Y448 316 aa32.96■■■□□ 2.87
CHKA-202ENST00000356135 C1orf167Q5SNV9 1468 aa32.95■■■□□ 2.86
CHKA-202ENST00000356135 MST1RQ04912 1400 aa32.94■■■□□ 2.86
CHKA-202ENST00000356135 NSD3Q9BZ95 1437 aa32.94■■■□□ 2.86
CHKA-202ENST00000356135 CPSF1Q10570 1443 aaKnown RBP32.93■■■□□ 2.86
CHKA-202ENST00000356135 PHF8Q9UPP1 1060 aa32.93■■■□□ 2.86
CHKA-202ENST00000356135 ITSN1Q15811 1721 aa32.92■■■□□ 2.86
CHKA-202ENST00000356135 NGDNQ8NEJ9 315 aaKnown RBP32.91■■■□□ 2.86
CHKA-202ENST00000356135 KTN1Q86UP2 1357 aaKnown RBP32.9■■■□□ 2.86
CHKA-202ENST00000356135 ANP32CO43423 234 aa32.9■■■□□ 2.86
CHKA-202ENST00000356135 CC2D1BQ5T0F9 858 aaKnown RBP32.9■■■□□ 2.86
CHKA-202ENST00000356135 AMER1Q5JTC6 1135 aaPredicted RBP32.89■■■□□ 2.86
CHKA-202ENST00000356135 ZNF692Q9BU19 519 aaPredicted RBP32.87■■■□□ 2.85
CHKA-202ENST00000356135 POLR3AO14802 1390 aaPredicted RBP32.86■■■□□ 2.85
CHKA-202ENST00000356135 SLAIN2Q9P270 581 aa32.86■■■□□ 2.85
CHKA-202ENST00000356135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.86■■■□□ 2.85
CHKA-202ENST00000356135 AKAP12Q02952 1782 aa32.84■■■□□ 2.85
CHKA-202ENST00000356135 PRKRIP1Q9H875 184 aaPredicted RBP32.83■■■□□ 2.85
CHKA-202ENST00000356135 FOXO3O43524 673 aa32.83■■■□□ 2.85
CHKA-202ENST00000356135 USP6P35125 1406 aa32.8■■■□□ 2.84
CHKA-202ENST00000356135 MON2Q7Z3U7 1717 aa32.8■■■□□ 2.84
CHKA-202ENST00000356135 DDX17Q92841 729 aaKnown RBP32.79■■■□□ 2.84
CHKA-202ENST00000356135 CGNL1Q0VF96 1302 aa32.79■■■□□ 2.84
CHKA-202ENST00000356135 EDC4Q6P2E9 1401 aaKnown RBP32.78■■■□□ 2.84
CHKA-202ENST00000356135 XPCQ01831 940 aaPredicted RBP32.78■■■□□ 2.84
CHKA-202ENST00000356135 FYB1O15117 783 aa32.78■■■□□ 2.84
CHKA-202ENST00000356135 PSME1Q06323 249 aa32.78■■■□□ 2.84
CHKA-202ENST00000356135 BRINP3Q76B58 766 aa32.78■■■□□ 2.84
CHKA-202ENST00000356135 GGNBP2Q9H3C7 697 aa32.77■■■□□ 2.84
CHKA-202ENST00000356135 TTC21BQ7Z4L5 1316 aa32.76■■■□□ 2.84
CHKA-202ENST00000356135 NME9Q86XW9 330 aa32.75■■■□□ 2.83
CHKA-202ENST00000356135 ZRANB1Q9UGI0 708 aa32.75■■■□□ 2.83
CHKA-202ENST00000356135 SSH2Q76I76 1423 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms