RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 BLMP54132 1417 aaPredicted RBP24.29■■□□□ 1.48
DDX55-202ENST00000354291 FOXO3O43524 673 aa24.29■■□□□ 1.48
DDX55-202ENST00000354291 LAMC1P11047 1609 aa24.28■■□□□ 1.48
DDX55-202ENST00000354291 MYOM2P54296 1465 aa24.27■■□□□ 1.48
DDX55-202ENST00000354291 UNC5CLQ8IV45 518 aa24.27■■□□□ 1.48
DDX55-202ENST00000354291 VGFO15240 615 aaPredicted RBP24.25■■□□□ 1.47
DDX55-202ENST00000354291 NUTM2FA1L443 756 aa24.23■■□□□ 1.47
DDX55-202ENST00000354291 COL22A1Q8NFW1 1626 aaPredicted RBP24.23■■□□□ 1.47
DDX55-202ENST00000354291 NEXMIFQ5QGS0 1516 aa24.22■■□□□ 1.47
DDX55-202ENST00000354291 SEPT12Q8IYM1 358 aa24.22■■□□□ 1.47
DDX55-202ENST00000354291 RALGAPBQ86X10 1494 aa24.21■■□□□ 1.47
DDX55-202ENST00000354291 PSDA5PKW4 1024 aaPredicted RBP24.21■■□□□ 1.47
DDX55-202ENST00000354291 SPHKAPQ2M3C7 1700 aa24.19■■□□□ 1.46
DDX55-202ENST00000354291 CCDC9Q9Y3X0 531 aaKnown RBP24.18■■□□□ 1.46
DDX55-202ENST00000354291 PXDNQ92626 1479 aa24.18■■□□□ 1.46
DDX55-202ENST00000354291 HFM1A2PYH4 1435 aa24.18■■□□□ 1.46
DDX55-202ENST00000354291 LRPPRCP42704 1394 aaKnown RBP24.17■■□□□ 1.46
DDX55-202ENST00000354291 PLEKHG5O94827 1062 aa24.17■■□□□ 1.46
DDX55-202ENST00000354291 HAP1P54257 671 aaPredicted RBP24.15■■□□□ 1.46
DDX55-202ENST00000354291 GLI3P10071 1580 aa24.14■■□□□ 1.45
DDX55-202ENST00000354291 HRCP23327 699 aa24.14■■□□□ 1.45
DDX55-202ENST00000354291 KRT27Q7Z3Y8 459 aa24.14■■□□□ 1.45
DDX55-202ENST00000354291 CLTCL1P53675 1640 aa24.13■■□□□ 1.45
DDX55-202ENST00000354291 SLIT2O94813 1529 aa24.13■■□□□ 1.45
DDX55-202ENST00000354291 WAPLQ7Z5K2 1190 aa24.12■■□□□ 1.45
DDX55-202ENST00000354291 STK26Q9P289 416 aa24.12■■□□□ 1.45
DDX55-202ENST00000354291 SPATA31A3Q5VYP0 1347 aa24.11■■□□□ 1.45
DDX55-202ENST00000354291 MARF1Q9Y4F3 1742 aaKnown RBP24.11■■□□□ 1.45
DDX55-202ENST00000354291 A0A0G2JS52 829 aa24.11■■□□□ 1.45
DDX55-202ENST00000354291 BAG6P46379 1132 aa24.11■■□□□ 1.45
DDX55-202ENST00000354291 MYT1Q01538 1121 aa24.11■■□□□ 1.45
DDX55-202ENST00000354291 VPS72Q15906 364 aa24.11■■□□□ 1.45
DDX55-202ENST00000354291 KRT28Q7Z3Y7 464 aa24.1■■□□□ 1.45
DDX55-202ENST00000354291 RPGRIP1LQ68CZ1 1315 aa24.1■■□□□ 1.45
DDX55-202ENST00000354291 CABLES1Q8TDN4 633 aa24.09■■□□□ 1.45
DDX55-202ENST00000354291 BRWD3Q6RI45 1802 aa24.08■■□□□ 1.45
DDX55-202ENST00000354291 ONECUT3O60422 494 aaPredicted RBP24.08■■□□□ 1.45
DDX55-202ENST00000354291 LRP5O75197 1615 aa24.08■■□□□ 1.45
DDX55-202ENST00000354291 NAIPQ13075 1403 aa24.07■■□□□ 1.44
DDX55-202ENST00000354291 PRAG1Q86YV5 1406 aa24.07■■□□□ 1.44
DDX55-202ENST00000354291 KIF1BO60333 1816 aa24.06■■□□□ 1.44
DDX55-202ENST00000354291 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.06■■□□□ 1.44
DDX55-202ENST00000354291 EN1Q05925 392 aaPredicted RBP24.04■■□□□ 1.44
DDX55-202ENST00000354291 LMOD2Q6P5Q4 547 aa24.04■■□□□ 1.44
DDX55-202ENST00000354291 CDC42BPGQ6DT37 1551 aa24.03■■□□□ 1.44
DDX55-202ENST00000354291 R3HDM1Q15032 1099 aaKnown RBP24.03■■□□□ 1.44
DDX55-202ENST00000354291 PSME1Q06323 249 aa24.01■■□□□ 1.43
DDX55-202ENST00000354291 FAM98CQ17RN3 349 aaKnown RBP24■■□□□ 1.43
DDX55-202ENST00000354291 PPARGC1BQ86YN6 1023 aaKnown RBP24■■□□□ 1.43
DDX55-202ENST00000354291 FAM83GA6ND36 823 aa23.99■■□□□ 1.43
DDX55-202ENST00000354291 TMEM132EQ6IEE7 984 aa23.99■■□□□ 1.43
DDX55-202ENST00000354291 CCDC144AA2RUR9 1427 aa23.99■■□□□ 1.43
DDX55-202ENST00000354291 FAM182BQ5T319 152 aa23.98■■□□□ 1.43
DDX55-202ENST00000354291 ADGRF5Q8IZF2 1346 aa23.98■■□□□ 1.43
DDX55-202ENST00000354291 USP32Q8NFA0 1604 aa23.97■■□□□ 1.43
DDX55-202ENST00000354291 PLEKHH1Q9ULM0 1364 aa23.97■■□□□ 1.43
DDX55-202ENST00000354291 PHF8Q9UPP1 1060 aa23.97■■□□□ 1.43
DDX55-202ENST00000354291 RGL3Q3MIN7 710 aa23.94■■□□□ 1.42
DDX55-202ENST00000354291 SLC4A1APQ9BWU0 796 aaKnown RBP23.93■■□□□ 1.42
DDX55-202ENST00000354291 TNS3Q68CZ2 1445 aa23.93■■□□□ 1.42
DDX55-202ENST00000354291 YY1P25490 414 aa23.92■■□□□ 1.42
DDX55-202ENST00000354291 BTG4Q9NY30 223 aa23.92■■□□□ 1.42
DDX55-202ENST00000354291 ABCC11Q96J66 1382 aa23.91■■□□□ 1.42
DDX55-202ENST00000354291 EZH2Q15910 746 aaKnown RBP23.9■■□□□ 1.42
DDX55-202ENST00000354291 TECPR2O15040 1411 aa23.89■■□□□ 1.41
DDX55-202ENST00000354291 PPLO60437 1756 aa23.88■■□□□ 1.41
DDX55-202ENST00000354291 SBNO1A3KN83 1393 aa23.87■■□□□ 1.41
DDX55-202ENST00000354291 ARHGEF10O15013 1369 aa23.87■■□□□ 1.41
DDX55-202ENST00000354291 PMFBP1Q8TBY8 1022 aa23.86■■□□□ 1.41
DDX55-202ENST00000354291 KIF1AQ12756 1690 aa23.86■■□□□ 1.41
DDX55-202ENST00000354291 PLCH1Q4KWH8 1693 aa23.86■■□□□ 1.41
DDX55-202ENST00000354291 NWD2Q9ULI1 1742 aa23.85■■□□□ 1.41
DDX55-202ENST00000354291 RRBP1Q9P2E9 1410 aaKnown RBP23.84■■□□□ 1.41
DDX55-202ENST00000354291 SAFB2Q14151 953 aaKnown RBP eCLIP23.84■■□□□ 1.41
DDX55-202ENST00000354291 FMN2Q9NZ56 1722 aa23.84■■□□□ 1.41
DDX55-202ENST00000354291 TRIM37O94972 964 aa23.82■■□□□ 1.4
DDX55-202ENST00000354291 SIRT1Q96EB6 747 aa23.81■■□□□ 1.4
DDX55-202ENST00000354291 CAMKK2Q96RR4 588 aa23.81■■□□□ 1.4
DDX55-202ENST00000354291 YTHDC2Q9H6S0 1430 aaKnown RBP23.81■■□□□ 1.4
DDX55-202ENST00000354291 SPATA31A5Q5VU36 1347 aa23.81■■□□□ 1.4
DDX55-202ENST00000354291 SPATA31A7Q8IWB4 1347 aa23.81■■□□□ 1.4
DDX55-202ENST00000354291 ANKRD30BQ9BXX2 1392 aa23.79■■□□□ 1.4
DDX55-202ENST00000354291 APBA3O96018 575 aa23.79■■□□□ 1.4
DDX55-202ENST00000354291 NRXN1Q9ULB1 1477 aa23.78■■□□□ 1.4
DDX55-202ENST00000354291 FAM196AQ6ZSG2 479 aa23.77■■□□□ 1.4
DDX55-202ENST00000354291 RGPD8O14715 1765 aaPredicted RBP23.77■■□□□ 1.4
DDX55-202ENST00000354291 DISP2A7MBM2 1401 aa23.76■■□□□ 1.39
DDX55-202ENST00000354291 RGPD1P0DJD0 1748 aa23.76■■□□□ 1.39
DDX55-202ENST00000354291 PRAM1Q96QH2 718 aa23.76■■□□□ 1.39
DDX55-202ENST00000354291 DCAF8L1A6NGE4 600 aa23.75■■□□□ 1.39
DDX55-202ENST00000354291 PPP1R1BQ9UD71 204 aaPredicted RBP23.74■■□□□ 1.39
DDX55-202ENST00000354291 PRDM11Q9NQV5 511 aa23.73■■□□□ 1.39
DDX55-202ENST00000354291 POGKQ9P215 609 aa23.73■■□□□ 1.39
DDX55-202ENST00000354291 NBPF8Q3BBV2 869 aa23.72■■□□□ 1.39
DDX55-202ENST00000354291 NBPF14Q5TI25 921 aa23.72■■□□□ 1.39
DDX55-202ENST00000354291 C14orf93Q9H972 538 aaKnown RBP23.72■■□□□ 1.39
DDX55-202ENST00000354291 DHX57Q6P158 1386 aaKnown RBP23.72■■□□□ 1.39
DDX55-202ENST00000354291 ABCA3Q99758 1704 aa23.72■■□□□ 1.39
DDX55-202ENST00000354291 KNDC1Q76NI1 1749 aa23.71■■□□□ 1.39
DDX55-202ENST00000354291 PIK3C2GO75747 1445 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms