RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 GNL2Q13823 731 aaKnown RBP17.58■□□□□ 0.4
SPPL3-201ENST00000353487 PLPPR3Q6T4P5 718 aa17.58■□□□□ 0.4
SPPL3-201ENST00000353487 ZNF526Q8TF50 670 aaPredicted RBP17.58■□□□□ 0.4
SPPL3-201ENST00000353487 RPRD2Q5VT52 1461 aaKnown RBP17.58■□□□□ 0.4
SPPL3-201ENST00000353487 IFT57Q9NWB7 429 aa17.57■□□□□ 0.4
SPPL3-201ENST00000353487 SOX12O15370 315 aa17.56■□□□□ 0.4
SPPL3-201ENST00000353487 RUNDC1Q96C34 613 aa17.56■□□□□ 0.4
SPPL3-201ENST00000353487 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
SPPL3-201ENST00000353487 PCDHB15Q9Y5E8 787 aa17.56■□□□□ 0.4
SPPL3-201ENST00000353487 KIF3BO15066 747 aa17.56■□□□□ 0.4
SPPL3-201ENST00000353487 SSFA2P28290 1259 aa17.56■□□□□ 0.4
SPPL3-201ENST00000353487 GGT6Q6P531 493 aa17.56■□□□□ 0.4
SPPL3-201ENST00000353487 TRIM6-TRIM34B2RNG4 842 aa17.55■□□□□ 0.4
SPPL3-201ENST00000353487 EXOSC9Q06265 439 aaKnown RBP17.55■□□□□ 0.4
SPPL3-201ENST00000353487 GRIN2AQ12879 1464 aa17.55■□□□□ 0.4
SPPL3-201ENST00000353487 ABCA5Q8WWZ7 1642 aa17.55■□□□□ 0.4
SPPL3-201ENST00000353487 TROQ12816 1431 aaPredicted RBP17.54■□□□□ 0.4
SPPL3-201ENST00000353487 PATL2C9JE40 543 aaKnown RBP17.54■□□□□ 0.4
SPPL3-201ENST00000353487 GOLGA6L1Q8N7Z2 621 aa17.54■□□□□ 0.4
SPPL3-201ENST00000353487 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
SPPL3-201ENST00000353487 WWC1Q8IX03 1113 aa17.54■□□□□ 0.4
SPPL3-201ENST00000353487 HTATSF1O43719 755 aaKnown RBP17.53■□□□□ 0.4
SPPL3-201ENST00000353487 MTHFSP49914 203 aa17.53■□□□□ 0.4
SPPL3-201ENST00000353487 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
SPPL3-201ENST00000353487 PDCL2Q8N4E4 241 aa17.53■□□□□ 0.4
SPPL3-201ENST00000353487 MCCP23508 829 aa17.53■□□□□ 0.4
SPPL3-201ENST00000353487 FGD1P98174 961 aa17.53■□□□□ 0.4
SPPL3-201ENST00000353487 CCDC39Q9UFE4 941 aa17.53■□□□□ 0.4
SPPL3-201ENST00000353487 SLC4A10Q6U841 1118 aa17.52■□□□□ 0.4
SPPL3-201ENST00000353487 KDM2BQ8NHM5 1336 aa17.52■□□□□ 0.4
SPPL3-201ENST00000353487 NUP153P49790 1475 aaKnown RBP17.52■□□□□ 0.4
SPPL3-201ENST00000353487 DIAPH3Q9NSV4 1193 aa17.52■□□□□ 0.39
SPPL3-201ENST00000353487 NUCB2P80303 420 aa17.51■□□□□ 0.39
SPPL3-201ENST00000353487 SPC24Q8NBT2 197 aa17.51■□□□□ 0.39
SPPL3-201ENST00000353487 ESF1Q9H501 851 aaKnown RBP17.51■□□□□ 0.39
SPPL3-201ENST00000353487 PPP4R3BQ5MIZ7 849 aa17.51■□□□□ 0.39
SPPL3-201ENST00000353487 K7ELQ4 463 aaPredicted RBP17.5■□□□□ 0.39
SPPL3-201ENST00000353487 TNNT1P13805 278 aa17.5■□□□□ 0.39
SPPL3-201ENST00000353487 MVPQ14764 893 aaKnown RBP17.5■□□□□ 0.39
SPPL3-201ENST00000353487 TEX35Q5T0J7 233 aa17.5■□□□□ 0.39
SPPL3-201ENST00000353487 LRPPRCP42704 1394 aaKnown RBP17.5■□□□□ 0.39
SPPL3-201ENST00000353487 ARHGEF11O15085 1522 aa17.5■□□□□ 0.39
SPPL3-201ENST00000353487 SPAG9O60271 1321 aaKnown RBP17.5■□□□□ 0.39
SPPL3-201ENST00000353487 RARSP54136 660 aaKnown RBP17.5■□□□□ 0.39
SPPL3-201ENST00000353487 RIPK4P57078 832 aa17.5■□□□□ 0.39
SPPL3-201ENST00000353487 PLEKHH1Q9ULM0 1364 aa17.5■□□□□ 0.39
SPPL3-201ENST00000353487 ISY1Q9ULR0 285 aaKnown RBP17.5■□□□□ 0.39
SPPL3-201ENST00000353487 NOB1Q9ULX3 412 aaKnown RBP17.5■□□□□ 0.39
SPPL3-201ENST00000353487 GPATCH11Q8N954 259 aa17.49■□□□□ 0.39
SPPL3-201ENST00000353487 HMGN5P82970 282 aaKnown RBP17.49■□□□□ 0.39
SPPL3-201ENST00000353487 AAMPQ13685 434 aa17.49■□□□□ 0.39
SPPL3-201ENST00000353487 FAM177BA6PVY3 158 aa17.49■□□□□ 0.39
SPPL3-201ENST00000353487 RILPL2Q969X0 211 aa17.49■□□□□ 0.39
SPPL3-201ENST00000353487 KDM6BO15054 1643 aa17.49■□□□□ 0.39
SPPL3-201ENST00000353487 SYCE3A1L190 88 aa17.49■□□□□ 0.39
SPPL3-201ENST00000353487 KANK1Q14678 1352 aa17.48■□□□□ 0.39
SPPL3-201ENST00000353487 KIF3AQ9Y496 699 aa17.48■□□□□ 0.39
SPPL3-201ENST00000353487 PHF14O94880 888 aa17.47■□□□□ 0.39
SPPL3-201ENST00000353487 SAMD9Q5K651 1589 aa17.47■□□□□ 0.39
SPPL3-201ENST00000353487 DHX37Q8IY37 1157 aaKnown RBP17.47■□□□□ 0.39
SPPL3-201ENST00000353487 ZFP91Q96JP5 570 aaPredicted RBP17.47■□□□□ 0.39
SPPL3-201ENST00000353487 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
SPPL3-201ENST00000353487 TARBP1Q13395 1621 aaKnown RBP17.46■□□□□ 0.39
SPPL3-201ENST00000353487 AFAP1Q8N556 730 aa17.46■□□□□ 0.39
SPPL3-201ENST00000353487 RLBP1P12271 317 aa17.46■□□□□ 0.39
SPPL3-201ENST00000353487 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
SPPL3-201ENST00000353487 CAMSAP2Q08AD1 1489 aa17.45■□□□□ 0.38
SPPL3-201ENST00000353487 CFAP70Q5T0N1 1121 aa17.45■□□□□ 0.38
SPPL3-201ENST00000353487 GPS2Q13227 327 aa17.45■□□□□ 0.38
SPPL3-201ENST00000353487 DISP3Q9P2K9 1392 aa17.45■□□□□ 0.38
SPPL3-201ENST00000353487 ERBINQ96RT1 1412 aa17.45■□□□□ 0.38
SPPL3-201ENST00000353487 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
SPPL3-201ENST00000353487 IPO4Q8TEX9 1081 aaKnown RBP17.45■□□□□ 0.38
SPPL3-201ENST00000353487 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
SPPL3-201ENST00000353487 ADAMTS12P58397 1594 aa17.44■□□□□ 0.38
SPPL3-201ENST00000353487 DISP1Q96F81 1524 aa17.44■□□□□ 0.38
SPPL3-201ENST00000353487 GORABQ5T7V8 394 aa17.44■□□□□ 0.38
SPPL3-201ENST00000353487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.44■□□□□ 0.38
SPPL3-201ENST00000353487 FBXW7Q969H0 707 aa17.44■□□□□ 0.38
SPPL3-201ENST00000353487 C9orf84Q5VXU9 1444 aa17.43■□□□□ 0.38
SPPL3-201ENST00000353487 CDC45O75419 566 aa17.43■□□□□ 0.38
SPPL3-201ENST00000353487 NEK4P51957 841 aa17.43■□□□□ 0.38
SPPL3-201ENST00000353487 TMEM57Q8N5G2 664 aa17.43■□□□□ 0.38
SPPL3-201ENST00000353487 NKTRP30414 1462 aaKnown RBP17.43■□□□□ 0.38
SPPL3-201ENST00000353487 HOMER1Q86YM7 354 aa17.43■□□□□ 0.38
SPPL3-201ENST00000353487 DMRT2Q9Y5R5 561 aa17.42■□□□□ 0.38
SPPL3-201ENST00000353487 WDR62O43379 1518 aa17.42■□□□□ 0.38
SPPL3-201ENST00000353487 IBSPP21815 317 aaPredicted RBP17.42■□□□□ 0.38
SPPL3-201ENST00000353487 SETQ01105 290 aaPredicted RBP17.42■□□□□ 0.38
SPPL3-201ENST00000353487 NGEFQ8N5V2 710 aa17.42■□□□□ 0.38
SPPL3-201ENST00000353487 GGNBP2Q9H3C7 697 aa17.42■□□□□ 0.38
SPPL3-201ENST00000353487 ANO2Q9NQ90 1003 aa17.42■□□□□ 0.38
SPPL3-201ENST00000353487 GPATCH8Q9UKJ3 1502 aaKnown RBP17.42■□□□□ 0.38
SPPL3-201ENST00000353487 CHD1LQ86WJ1 897 aa17.42■□□□□ 0.38
SPPL3-201ENST00000353487 IRX3P78415 501 aaPredicted RBP17.41■□□□□ 0.38
SPPL3-201ENST00000353487 TAF7LQ5H9L4 462 aa17.41■□□□□ 0.38
SPPL3-201ENST00000353487 NOC3LQ8WTT2 800 aaKnown RBP17.41■□□□□ 0.38
SPPL3-201ENST00000353487 CIZ1Q9ULV3 898 aaPredicted RBP17.41■□□□□ 0.38
SPPL3-201ENST00000353487 ATF7IPQ6VMQ6 1270 aa17.41■□□□□ 0.38
SPPL3-201ENST00000353487 CFAP44Q96MT7 982 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms