RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 CDCA8Q53HL2 280 aa27.96■■■□□ 2.07
SIGMAR1-202ENST00000353468 PTCH1Q13635 1447 aa27.96■■■□□ 2.07
SIGMAR1-202ENST00000353468 MINK1Q8N4C8 1332 aaPredicted RBP27.95■■■□□ 2.06
SIGMAR1-202ENST00000353468 EVC2Q86UK5 1308 aa27.93■■■□□ 2.06
SIGMAR1-202ENST00000353468 DIEXFQ68CQ4 756 aaKnown RBP27.91■■■□□ 2.06
SIGMAR1-202ENST00000353468 DMRT2Q9Y5R5 561 aa27.88■■■□□ 2.05
SIGMAR1-202ENST00000353468 TULP4Q9NRJ4 1543 aa27.88■■■□□ 2.05
SIGMAR1-202ENST00000353468 NWD1Q149M9 1564 aa27.88■■■□□ 2.05
SIGMAR1-202ENST00000353468 AEBP2Q6ZN18 517 aaPredicted RBP27.86■■■□□ 2.05
SIGMAR1-202ENST00000353468 PUS7Q96PZ0 661 aaKnown RBP27.86■■■□□ 2.05
SIGMAR1-202ENST00000353468 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.84■■■□□ 2.05
SIGMAR1-202ENST00000353468 CDK19Q9BWU1 502 aa27.83■■■□□ 2.05
SIGMAR1-202ENST00000353468 SRPK2P78362 688 aaKnown RBP27.82■■■□□ 2.04
SIGMAR1-202ENST00000353468 CABP2Q9NPB3 220 aa27.82■■■□□ 2.04
SIGMAR1-202ENST00000353468 WASLO00401 505 aaPredicted RBP27.82■■■□□ 2.04
SIGMAR1-202ENST00000353468 NKTRP30414 1462 aaKnown RBP27.8■■■□□ 2.04
SIGMAR1-202ENST00000353468 PROSER2Q86WR7 435 aaPredicted RBP27.79■■■□□ 2.04
SIGMAR1-202ENST00000353468 ADGRB2O60241 1585 aa27.79■■■□□ 2.04
SIGMAR1-202ENST00000353468 STRCP1A6NGW2 1772 aa27.77■■■□□ 2.04
SIGMAR1-202ENST00000353468 RBM33Q96EV2 1170 aaKnown RBP27.77■■■□□ 2.04
SIGMAR1-202ENST00000353468 ATAD2Q6PL18 1390 aa27.75■■■□□ 2.03
SIGMAR1-202ENST00000353468 ZNF335Q9H4Z2 1342 aaPredicted RBP27.73■■■□□ 2.03
SIGMAR1-202ENST00000353468 TMC1Q8TDI8 760 aa27.73■■■□□ 2.03
SIGMAR1-202ENST00000353468 PANK3Q9H999 370 aa27.72■■■□□ 2.03
SIGMAR1-202ENST00000353468 MYOM1P52179 1685 aa27.72■■■□□ 2.03
SIGMAR1-202ENST00000353468 SLC12A5Q9H2X9 1139 aa27.71■■■□□ 2.03
SIGMAR1-202ENST00000353468 ADGRL3Q9HAR2 1447 aa27.7■■■□□ 2.03
SIGMAR1-202ENST00000353468 C14orf37Q86TY3 774 aa27.7■■■□□ 2.03
SIGMAR1-202ENST00000353468 NALCNQ8IZF0 1738 aa27.69■■■□□ 2.02
SIGMAR1-202ENST00000353468 NUDT16Q96DE0 195 aaKnown RBP27.69■■■□□ 2.02
SIGMAR1-202ENST00000353468 TMEM94Q12767 1356 aa27.68■■■□□ 2.02
SIGMAR1-202ENST00000353468 NINLQ9Y2I6 1382 aa27.68■■■□□ 2.02
SIGMAR1-202ENST00000353468 NCOA3Q9Y6Q9 1424 aa27.67■■■□□ 2.02
SIGMAR1-202ENST00000353468 PRR36Q9H6K5 1346 aa27.65■■■□□ 2.02
SIGMAR1-202ENST00000353468 CCDC61Q9Y6R9 512 aa27.65■■■□□ 2.02
SIGMAR1-202ENST00000353468 NUTM2FA1L443 756 aa27.65■■■□□ 2.02
SIGMAR1-202ENST00000353468 C19orf44Q9H6X5 657 aa27.64■■■□□ 2.01
SIGMAR1-202ENST00000353468 CABP1Q9NZU7 370 aa27.64■■■□□ 2.01
SIGMAR1-202ENST00000353468 CDC42BPGQ6DT37 1551 aa27.64■■■□□ 2.01
SIGMAR1-202ENST00000353468 ATP7BP35670 1465 aa27.63■■■□□ 2.01
SIGMAR1-202ENST00000353468 PER1O15534 1290 aaPredicted RBP27.63■■■□□ 2.01
SIGMAR1-202ENST00000353468 LRRC7Q96NW7 1537 aa27.61■■■□□ 2.01
SIGMAR1-202ENST00000353468 FMN2Q9NZ56 1722 aa27.61■■■□□ 2.01
SIGMAR1-202ENST00000353468 PPIP5K1Q6PFW1 1433 aa27.6■■■□□ 2.01
SIGMAR1-202ENST00000353468 ANKRD36BQ8N2N9 1353 aa27.59■■■□□ 2.01
SIGMAR1-202ENST00000353468 ANKARQ7Z5J8 1434 aa27.59■■■□□ 2.01
SIGMAR1-202ENST00000353468 TERF2IPQ9NYB0 399 aa27.58■■■□□ 2.01
SIGMAR1-202ENST00000353468 USP32Q8NFA0 1604 aa27.57■■■□□ 2
SIGMAR1-202ENST00000353468 ANP32CO43423 234 aa27.57■■■□□ 2
SIGMAR1-202ENST00000353468 CARD14Q9BXL6 1004 aa27.57■■■□□ 2
SIGMAR1-202ENST00000353468 KNSTRNQ9Y448 316 aa27.57■■■□□ 2
SIGMAR1-202ENST00000353468 HDGFL2Q7Z4V5 671 aaPredicted RBP27.56■■■□□ 2
SIGMAR1-202ENST00000353468 MIER1Q8N108 512 aa27.56■■■□□ 2
SIGMAR1-202ENST00000353468 XIRP1Q702N8 1843 aaKnown RBP27.55■■■□□ 2
SIGMAR1-202ENST00000353468 CD163L1Q9NR16 1453 aa27.55■■■□□ 2
SIGMAR1-202ENST00000353468 PLEKHG3A1L390 1219 aa27.55■■■□□ 2
SIGMAR1-202ENST00000353468 A0A1W2PP64 1363 aa27.54■■■□□ 2
SIGMAR1-202ENST00000353468 MSH6P52701 1360 aa27.54■■■□□ 2
SIGMAR1-202ENST00000353468 DCCP43146 1447 aa27.54■■■□□ 2
SIGMAR1-202ENST00000353468 TOPAZ1Q8N9V7 1692 aa27.54■■■□□ 2
SIGMAR1-202ENST00000353468 RGPD8O14715 1765 aaPredicted RBP27.53■■■□□ 2
SIGMAR1-202ENST00000353468 ATF3P18847 181 aa27.53■■■□□ 2
SIGMAR1-202ENST00000353468 ITSN1Q15811 1721 aa27.51■■□□□ 1.99
SIGMAR1-202ENST00000353468 CPSF1Q10570 1443 aaKnown RBP27.5■■□□□ 1.99
SIGMAR1-202ENST00000353468 NSD3Q9BZ95 1437 aa27.5■■□□□ 1.99
SIGMAR1-202ENST00000353468 CADPS2Q86UW7 1296 aa27.5■■□□□ 1.99
SIGMAR1-202ENST00000353468 PMFBP1Q8TBY8 1022 aa27.49■■□□□ 1.99
SIGMAR1-202ENST00000353468 ZNF692Q9BU19 519 aaPredicted RBP27.49■■□□□ 1.99
SIGMAR1-202ENST00000353468 LTBP4Q8N2S1 1624 aa27.48■■□□□ 1.99
SIGMAR1-202ENST00000353468 CNGB1Q14028 1251 aaPredicted RBP27.48■■□□□ 1.99
SIGMAR1-202ENST00000353468 AMER1Q5JTC6 1135 aaPredicted RBP27.48■■□□□ 1.99
SIGMAR1-202ENST00000353468 PRKRIP1Q9H875 184 aaPredicted RBP27.48■■□□□ 1.99
SIGMAR1-202ENST00000353468 ACEP12821 1306 aa27.48■■□□□ 1.99
SIGMAR1-202ENST00000353468 ESCO1Q5FWF5 840 aa27.46■■□□□ 1.99
SIGMAR1-202ENST00000353468 KTN1Q86UP2 1357 aaKnown RBP27.46■■□□□ 1.99
SIGMAR1-202ENST00000353468 CC2D1BQ5T0F9 858 aaKnown RBP27.45■■□□□ 1.99
SIGMAR1-202ENST00000353468 NGDNQ8NEJ9 315 aaKnown RBP27.45■■□□□ 1.99
SIGMAR1-202ENST00000353468 PHF8Q9UPP1 1060 aa27.45■■□□□ 1.99
SIGMAR1-202ENST00000353468 C1orf167Q5SNV9 1468 aa27.44■■□□□ 1.98
SIGMAR1-202ENST00000353468 MST1RQ04912 1400 aa27.44■■□□□ 1.98
SIGMAR1-202ENST00000353468 NPC1L1Q9UHC9 1359 aa27.44■■□□□ 1.98
SIGMAR1-202ENST00000353468 POLR3AO14802 1390 aaPredicted RBP27.44■■□□□ 1.98
SIGMAR1-202ENST00000353468 CGNL1Q0VF96 1302 aa27.44■■□□□ 1.98
SIGMAR1-202ENST00000353468 AKAP12Q02952 1782 aa27.43■■□□□ 1.98
SIGMAR1-202ENST00000353468 ORAI2Q96SN7 254 aa27.42■■□□□ 1.98
SIGMAR1-202ENST00000353468 RALBP1Q15311 655 aa27.4■■□□□ 1.98
SIGMAR1-202ENST00000353468 EDC4Q6P2E9 1401 aaKnown RBP27.4■■□□□ 1.98
SIGMAR1-202ENST00000353468 MON2Q7Z3U7 1717 aa27.39■■□□□ 1.98
SIGMAR1-202ENST00000353468 USP6P35125 1406 aa27.38■■□□□ 1.97
SIGMAR1-202ENST00000353468 PARD3Q8TEW0 1356 aa27.38■■□□□ 1.97
SIGMAR1-202ENST00000353468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.37■■□□□ 1.97
SIGMAR1-202ENST00000353468 FYB1O15117 783 aa27.35■■□□□ 1.97
SIGMAR1-202ENST00000353468 SLAIN2Q9P270 581 aa27.35■■□□□ 1.97
SIGMAR1-202ENST00000353468 NSD2O96028 1365 aa27.35■■□□□ 1.97
SIGMAR1-202ENST00000353468 TTC21BQ7Z4L5 1316 aa27.34■■□□□ 1.97
SIGMAR1-202ENST00000353468 SSH2Q76I76 1423 aa27.32■■□□□ 1.96
SIGMAR1-202ENST00000353468 KIF1AQ12756 1690 aa27.32■■□□□ 1.96
SIGMAR1-202ENST00000353468 CCER2I3L3R5 266 aa27.31■■□□□ 1.96
SIGMAR1-202ENST00000353468 FOXO3O43524 673 aa27.31■■□□□ 1.96
SIGMAR1-202ENST00000353468 PSME1Q06323 249 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms