RNA–Protein interactions for RNA: ENST00000351986.10

NPM1-202, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-202ENST00000351986 SMPD1P17405 629 aa10.97□□□□□ -0.65
NPM1-202ENST00000351986 SALL2Q9Y467 1007 aaPredicted RBP10.97□□□□□ -0.65
NPM1-202ENST00000351986 J3QL48 77 aa10.96□□□□□ -0.65
NPM1-202ENST00000351986 SMCPP49901 116 aaPredicted RBP10.96□□□□□ -0.65
NPM1-202ENST00000351986 NFX1Q12986 1120 aaKnown RBP10.96□□□□□ -0.65
NPM1-202ENST00000351986 CTC1Q2NKJ3 1217 aa10.96□□□□□ -0.65
NPM1-202ENST00000351986 MSS51Q4VC12 460 aa10.96□□□□□ -0.65
NPM1-202ENST00000351986 SULF1Q8IWU6 871 aa10.96□□□□□ -0.65
NPM1-202ENST00000351986 SNRPBP14678 240 aaKnown RBP10.95□□□□□ -0.66
NPM1-202ENST00000351986 LCE2CQ5TA81 110 aa10.95□□□□□ -0.66
NPM1-202ENST00000351986 MRGPRX2Q96LB1 330 aa10.95□□□□□ -0.66
NPM1-202ENST00000351986 TRIM32Q13049 653 aa10.94□□□□□ -0.66
NPM1-202ENST00000351986 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
NPM1-202ENST00000351986 HLA-CQ95604 372 aa10.94□□□□□ -0.66
NPM1-202ENST00000351986 WNT7AO00755 349 aa10.93□□□□□ -0.66
NPM1-202ENST00000351986 SNIP1Q8TAD8 396 aaKnown RBP10.93□□□□□ -0.66
NPM1-202ENST00000351986 ATP13A2Q9NQ11 1180 aa10.92□□□□□ -0.66
NPM1-202ENST00000351986 HPS1Q92902 700 aa10.91□□□□□ -0.66
NPM1-202ENST00000351986 MYO15BQ96JP2 1530 aa10.9□□□□□ -0.66
NPM1-202ENST00000351986 MMP16P51512 607 aa10.89□□□□□ -0.67
NPM1-202ENST00000351986 GRIPAP1Q4V328 841 aa10.88□□□□□ -0.67
NPM1-202ENST00000351986 GPIHBP1Q8IV16 184 aa10.88□□□□□ -0.67
NPM1-202ENST00000351986 CCDC24Q8N4L8 307 aa10.88□□□□□ -0.67
NPM1-202ENST00000351986 CD46P15529 392 aa10.87□□□□□ -0.67
NPM1-202ENST00000351986 SKOR1P84550 965 aa10.86□□□□□ -0.67
NPM1-202ENST00000351986 Q3C1V9 767 aa10.86□□□□□ -0.67
NPM1-202ENST00000351986 USB1Q9BQ65 265 aaKnown RBP10.86□□□□□ -0.67
NPM1-202ENST00000351986 NACADO15069 1562 aa10.86□□□□□ -0.67
NPM1-202ENST00000351986 DXOO77932 396 aaKnown RBP10.85□□□□□ -0.67
NPM1-202ENST00000351986 GUCA2AQ02747 115 aa10.85□□□□□ -0.67
NPM1-202ENST00000351986 KDM4AO75164 1064 aa10.84□□□□□ -0.67
NPM1-202ENST00000351986 TRIM47Q96LD4 638 aa10.84□□□□□ -0.67
NPM1-202ENST00000351986 TERTO14746 1132 aaKnown RBP10.83□□□□□ -0.68
NPM1-202ENST00000351986 WIPF1O43516 503 aa10.83□□□□□ -0.68
NPM1-202ENST00000351986 RC3H1Q5TC82 1133 aaKnown RBP10.83□□□□□ -0.68
NPM1-202ENST00000351986 RB1CC1Q8TDY2 1594 aa10.82□□□□□ -0.68
NPM1-202ENST00000351986 SYMPKQ92797 1274 aaKnown RBP10.82□□□□□ -0.68
NPM1-202ENST00000351986 DCAF1Q9Y4B6 1507 aa10.82□□□□□ -0.68
NPM1-202ENST00000351986 MDM2Q00987 491 aaPredicted RBP10.81□□□□□ -0.68
NPM1-202ENST00000351986 ZCCHC6Q5VYS8 1495 aaKnown RBP10.81□□□□□ -0.68
NPM1-202ENST00000351986 STK17AQ9UEE5 414 aa10.8□□□□□ -0.68
NPM1-202ENST00000351986 ALDH1A1P00352 501 aa10.78□□□□□ -0.68
NPM1-202ENST00000351986 SENP2Q9HC62 589 aa10.78□□□□□ -0.68
NPM1-202ENST00000351986 HOXA2O43364 376 aa10.77□□□□□ -0.69
NPM1-202ENST00000351986 INSM1Q01101 510 aaPredicted RBP10.77□□□□□ -0.69
NPM1-202ENST00000351986 PTCRAQ6ISU1 281 aaPredicted RBP10.77□□□□□ -0.69
NPM1-202ENST00000351986 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
NPM1-202ENST00000351986 MAP2K5Q13163 448 aa10.76□□□□□ -0.69
NPM1-202ENST00000351986 IRF6O14896 467 aa10.75□□□□□ -0.69
NPM1-202ENST00000351986 BMP1P13497 986 aa10.74□□□□□ -0.69
NPM1-202ENST00000351986 WNT7BP56706 349 aa10.74□□□□□ -0.69
NPM1-202ENST00000351986 PLCB2Q00722 1185 aa10.74□□□□□ -0.69
NPM1-202ENST00000351986 JUNDP17535 347 aa10.73□□□□□ -0.69
NPM1-202ENST00000351986 KIFC2Q96AC6 838 aa10.72□□□□□ -0.69
NPM1-202ENST00000351986 SIAH2O43255 324 aa10.71□□□□□ -0.69
NPM1-202ENST00000351986 VEGFBP49765 207 aa10.71□□□□□ -0.69
NPM1-202ENST00000351986 USP46P62068 366 aa10.71□□□□□ -0.69
NPM1-202ENST00000351986 TRIM46Q7Z4K8 759 aa10.71□□□□□ -0.69
NPM1-202ENST00000351986 EHBP1Q8NDI1 1231 aa10.69□□□□□ -0.7
NPM1-202ENST00000351986 NUDT12Q9BQG2 462 aa10.69□□□□□ -0.7
NPM1-202ENST00000351986 CCDC102AQ96A19 550 aa10.68□□□□□ -0.7
NPM1-202ENST00000351986 KDM2AQ9Y2K7 1162 aa10.68□□□□□ -0.7
NPM1-202ENST00000351986 GMPRP36959 345 aa10.67□□□□□ -0.7
NPM1-202ENST00000351986 PCDHGC3Q9UN70 934 aa10.67□□□□□ -0.7
NPM1-202ENST00000351986 CAPN5O15484 640 aaPredicted RBP10.66□□□□□ -0.7
NPM1-202ENST00000351986 SH3BP2P78314 561 aa10.66□□□□□ -0.7
NPM1-202ENST00000351986 FAM217BQ9NTX9 383 aaPredicted RBP10.66□□□□□ -0.7
NPM1-202ENST00000351986 NXF1Q9UBU9 619 aaKnown RBP10.66□□□□□ -0.7
NPM1-202ENST00000351986 MINK1Q8N4C8 1332 aaPredicted RBP10.65□□□□□ -0.7
NPM1-202ENST00000351986 WASF2Q9Y6W5 498 aa10.65□□□□□ -0.7
NPM1-202ENST00000351986 LORP23490 312 aaPredicted RBP10.64□□□□□ -0.71
NPM1-202ENST00000351986 RETREG3Q86VR2 466 aa10.64□□□□□ -0.71
NPM1-202ENST00000351986 GPCPD1Q9NPB8 672 aa10.64□□□□□ -0.71
NPM1-202ENST00000351986 LINC01559Q495D7 138 aa10.63□□□□□ -0.71
NPM1-202ENST00000351986 NUTM1Q86Y26 1132 aa10.63□□□□□ -0.71
NPM1-202ENST00000351986 SLC16A10Q8TF71 515 aa10.63□□□□□ -0.71
NPM1-202ENST00000351986 C6orf229H3BNL8 230 aa10.62□□□□□ -0.71
NPM1-202ENST00000351986 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
NPM1-202ENST00000351986 TLL2Q9Y6L7 1015 aa10.62□□□□□ -0.71
NPM1-202ENST00000351986 ERBB4Q15303 1308 aa10.61□□□□□ -0.71
NPM1-202ENST00000351986 FDX1P10109 184 aa10.61□□□□□ -0.71
NPM1-202ENST00000351986 MS4A1P11836 297 aa10.6□□□□□ -0.71
NPM1-202ENST00000351986 BAP1Q92560 729 aa10.6□□□□□ -0.71
NPM1-202ENST00000351986 ZFP42Q96MM3 310 aa10.6□□□□□ -0.71
NPM1-202ENST00000351986 CCNYL3P0C7X3 344 aa10.59□□□□□ -0.71
NPM1-202ENST00000351986 NDUFV2P19404 249 aa10.59□□□□□ -0.71
NPM1-202ENST00000351986 CLCN1P35523 988 aa10.59□□□□□ -0.71
NPM1-202ENST00000351986 UNC93B1Q9H1C4 597 aa10.59□□□□□ -0.71
NPM1-202ENST00000351986 ZSCAN1Q8NBB4 408 aa10.57□□□□□ -0.72
NPM1-202ENST00000351986 SOBPA7XYQ1 873 aa10.56□□□□□ -0.72
NPM1-202ENST00000351986 H3BM21 787 aa10.56□□□□□ -0.72
NPM1-202ENST00000351986 KRI1Q8N9T8 703 aaKnown RBP10.56□□□□□ -0.72
NPM1-202ENST00000351986 IRF7Q92985 503 aa10.56□□□□□ -0.72
NPM1-202ENST00000351986 SPIRE2Q8WWL2 714 aa10.55□□□□□ -0.72
NPM1-202ENST00000351986 EVA1BQ9NVM1 165 aa10.55□□□□□ -0.72
NPM1-202ENST00000351986 MOXD2PA6NHM9 499 aa10.54□□□□□ -0.72
NPM1-202ENST00000351986 SHROOM4Q9ULL8 1493 aa10.54□□□□□ -0.72
NPM1-202ENST00000351986 SSTR3P32745 418 aaPredicted RBP10.53□□□□□ -0.72
NPM1-202ENST00000351986 NNTQ13423 1086 aa10.53□□□□□ -0.72
NPM1-202ENST00000351986 PTPRNQ16849 979 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms