RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 CCAR2Q8N163 923 aaKnown RBP18.54■□□□□ 0.56
COG3-201ENST00000349995 PDCL2Q8N4E4 241 aa18.54■□□□□ 0.56
COG3-201ENST00000349995 NUP153P49790 1475 aaKnown RBP18.53■□□□□ 0.56
COG3-201ENST00000349995 FGD1P98174 961 aa18.53■□□□□ 0.56
COG3-201ENST00000349995 ADAMTS8Q9UP79 889 aa18.53■□□□□ 0.56
COG3-201ENST00000349995 GPATCH8Q9UKJ3 1502 aaKnown RBP18.52■□□□□ 0.56
COG3-201ENST00000349995 GPS2Q13227 327 aa18.52■□□□□ 0.56
COG3-201ENST00000349995 GNL2Q13823 731 aaKnown RBP18.52■□□□□ 0.56
COG3-201ENST00000349995 SPDYE4A6NLX3 237 aa18.52■□□□□ 0.56
COG3-201ENST00000349995 NAP1L2Q9ULW6 460 aaPredicted RBP18.52■□□□□ 0.55
COG3-201ENST00000349995 TAF3Q5VWG9 929 aa18.51■□□□□ 0.55
COG3-201ENST00000349995 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
COG3-201ENST00000349995 UGGT2Q9NYU1 1516 aa18.51■□□□□ 0.55
COG3-201ENST00000349995 IGSF3O75054 1194 aa18.51■□□□□ 0.55
COG3-201ENST00000349995 PANK1Q8TE04 598 aa18.51■□□□□ 0.55
COG3-201ENST00000349995 VGLL3A8MV65 326 aa18.51■□□□□ 0.55
COG3-201ENST00000349995 KIF3AQ9Y496 699 aa18.51■□□□□ 0.55
COG3-201ENST00000349995 SMG6Q86US8 1419 aaKnown RBP18.5■□□□□ 0.55
COG3-201ENST00000349995 CFAP44Q96MT7 982 aa18.5■□□□□ 0.55
COG3-201ENST00000349995 CHMP3Q9Y3E7 222 aa18.5■□□□□ 0.55
COG3-201ENST00000349995 EVC2Q86UK5 1308 aa18.5■□□□□ 0.55
COG3-201ENST00000349995 PRPF40AO75400 957 aaKnown RBP18.5■□□□□ 0.55
COG3-201ENST00000349995 KIF16BQ96L93 1317 aa18.5■□□□□ 0.55
COG3-201ENST00000349995 IPO8O15397 1037 aaKnown RBP18.49■□□□□ 0.55
COG3-201ENST00000349995 ANKRD45Q5TZF3 282 aa18.49■□□□□ 0.55
COG3-201ENST00000349995 CCDC141Q6ZP82 1450 aa18.49■□□□□ 0.55
COG3-201ENST00000349995 NUCB2P80303 420 aa18.48■□□□□ 0.55
COG3-201ENST00000349995 KIF21AQ7Z4S6 1674 aa18.48■□□□□ 0.55
COG3-201ENST00000349995 PAXIP1Q6ZW49 1069 aaPredicted RBP18.47■□□□□ 0.55
COG3-201ENST00000349995 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
COG3-201ENST00000349995 SETQ01105 290 aaPredicted RBP18.47■□□□□ 0.55
COG3-201ENST00000349995 CTTNBP2Q8WZ74 1663 aa18.47■□□□□ 0.55
COG3-201ENST00000349995 ATP10BO94823 1461 aa18.47■□□□□ 0.55
COG3-201ENST00000349995 RPRD2Q5VT52 1461 aaKnown RBP18.47■□□□□ 0.55
COG3-201ENST00000349995 SASS6Q6UVJ0 657 aa18.46■□□□□ 0.55
COG3-201ENST00000349995 PPP4R3BQ5MIZ7 849 aa18.46■□□□□ 0.55
COG3-201ENST00000349995 STAC3Q96MF2 364 aa18.46■□□□□ 0.55
COG3-201ENST00000349995 BRD4O60885 1362 aaPredicted RBP18.45■□□□□ 0.54
COG3-201ENST00000349995 SLC12A5Q9H2X9 1139 aa18.45■□□□□ 0.54
COG3-201ENST00000349995 PLEKHH2Q8IVE3 1493 aa18.45■□□□□ 0.54
COG3-201ENST00000349995 A0A0G2JS52 829 aa18.44■□□□□ 0.54
COG3-201ENST00000349995 NOM1Q5C9Z4 860 aaKnown RBP18.44■□□□□ 0.54
COG3-201ENST00000349995 GGNBP2Q9H3C7 697 aa18.44■□□□□ 0.54
COG3-201ENST00000349995 LNPKQ9C0E8 428 aa18.44■□□□□ 0.54
COG3-201ENST00000349995 ELL2O00472 640 aaPredicted RBP18.43■□□□□ 0.54
COG3-201ENST00000349995 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
COG3-201ENST00000349995 SPC24Q8NBT2 197 aa18.43■□□□□ 0.54
COG3-201ENST00000349995 KIF14Q15058 1648 aa18.41■□□□□ 0.54
COG3-201ENST00000349995 GOLGA6L19H0YKK7 550 aa18.41■□□□□ 0.54
COG3-201ENST00000349995 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.41■□□□□ 0.54
COG3-201ENST00000349995 DYNC1I1O14576 645 aa18.41■□□□□ 0.54
COG3-201ENST00000349995 ADAMTS12P58397 1594 aa18.41■□□□□ 0.54
COG3-201ENST00000349995 PDZRN3Q9UPQ7 1066 aa18.41■□□□□ 0.54
COG3-201ENST00000349995 HOMER1Q86YM7 354 aa18.4■□□□□ 0.54
COG3-201ENST00000349995 RAPGEF6Q8TEU7 1601 aa18.4■□□□□ 0.54
COG3-201ENST00000349995 TBC1D2Q9BYX2 928 aa18.4■□□□□ 0.54
COG3-201ENST00000349995 BECN2A8MW95 431 aa18.39■□□□□ 0.54
COG3-201ENST00000349995 MTHFSP49914 203 aa18.39■□□□□ 0.53
COG3-201ENST00000349995 TPD52L1Q16890 204 aaPredicted RBP18.39■□□□□ 0.53
COG3-201ENST00000349995 NGDNQ8NEJ9 315 aaKnown RBP18.39■□□□□ 0.53
COG3-201ENST00000349995 TRIM6-TRIM34B2RNG4 842 aa18.38■□□□□ 0.53
COG3-201ENST00000349995 SKIDA1Q1XH10 827 aa18.38■□□□□ 0.53
COG3-201ENST00000349995 EID1Q9Y6B2 187 aa18.38■□□□□ 0.53
COG3-201ENST00000349995 CFAP43Q8NDM7 1665 aa18.38■□□□□ 0.53
COG3-201ENST00000349995 C20orf194Q5TEA3 1177 aa18.38■□□□□ 0.53
COG3-201ENST00000349995 CWC15Q9P013 229 aaKnown RBP18.38■□□□□ 0.53
COG3-201ENST00000349995 TSPY26PQ9H489 355 aa18.37■□□□□ 0.53
COG3-201ENST00000349995 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
COG3-201ENST00000349995 RTF1Q92541 710 aaKnown RBP18.37■□□□□ 0.53
COG3-201ENST00000349995 OS9Q13438 667 aaPredicted RBP18.36■□□□□ 0.53
COG3-201ENST00000349995 AAMPQ13685 434 aa18.36■□□□□ 0.53
COG3-201ENST00000349995 ARGLU1Q9NWB6 273 aaPredicted RBP18.36■□□□□ 0.53
COG3-201ENST00000349995 ERBINQ96RT1 1412 aa18.36■□□□□ 0.53
COG3-201ENST00000349995 ZKSCAN2Q63HK3 967 aa18.36■□□□□ 0.53
COG3-201ENST00000349995 NOC3LQ8WTT2 800 aaKnown RBP18.36■□□□□ 0.53
COG3-201ENST00000349995 WDR62O43379 1518 aa18.36■□□□□ 0.53
COG3-201ENST00000349995 SMAP1Q8IYB5 467 aaPredicted RBP18.35■□□□□ 0.53
COG3-201ENST00000349995 CCDC112Q8NEF3 446 aa18.35■□□□□ 0.53
COG3-201ENST00000349995 DISP1Q96F81 1524 aa18.35■□□□□ 0.53
COG3-201ENST00000349995 LTV1Q96GA3 475 aaPredicted RBP18.35■□□□□ 0.53
COG3-201ENST00000349995 BCAR3O75815 825 aa18.34■□□□□ 0.53
COG3-201ENST00000349995 IRX3P78415 501 aaPredicted RBP18.34■□□□□ 0.53
COG3-201ENST00000349995 MNS1Q8NEH6 495 aa18.34■□□□□ 0.53
COG3-201ENST00000349995 KIAA0556O60303 1618 aa18.34■□□□□ 0.53
COG3-201ENST00000349995 TAF7LQ5H9L4 462 aa18.33■□□□□ 0.53
COG3-201ENST00000349995 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
COG3-201ENST00000349995 LETM1O95202 739 aaPredicted RBP18.33■□□□□ 0.52
COG3-201ENST00000349995 SYCE3A1L190 88 aa18.32■□□□□ 0.52
COG3-201ENST00000349995 GORABQ5T7V8 394 aa18.32■□□□□ 0.52
COG3-201ENST00000349995 MBD3O95983 291 aa18.32■□□□□ 0.52
COG3-201ENST00000349995 GPATCH11Q8N954 259 aa18.32■□□□□ 0.52
COG3-201ENST00000349995 PRAM1Q96QH2 718 aa18.32■□□□□ 0.52
COG3-201ENST00000349995 CALCOCO1Q9P1Z2 691 aa18.31■□□□□ 0.52
COG3-201ENST00000349995 PATL2C9JE40 543 aaKnown RBP18.31■□□□□ 0.52
COG3-201ENST00000349995 OFD1O75665 1012 aa18.31■□□□□ 0.52
COG3-201ENST00000349995 TCOF1Q13428 1488 aaKnown RBP18.31■□□□□ 0.52
COG3-201ENST00000349995 TCP11L2Q8N4U5 519 aa18.31■□□□□ 0.52
COG3-201ENST00000349995 COG3Q96JB2 828 aa18.31■□□□□ 0.52
COG3-201ENST00000349995 ADGRF5Q8IZF2 1346 aa18.3■□□□□ 0.52
COG3-201ENST00000349995 DIAPH1O60610 1272 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms