RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 CHMP3Q9Y3E7 222 aa16.26■□□□□ 0.19
TCF3-202ENST00000344749 MAGI3Q5TCQ9 1506 aa16.26■□□□□ 0.19
TCF3-202ENST00000344749 API5Q9BZZ5 524 aaKnown RBP16.26■□□□□ 0.19
TCF3-202ENST00000344749 TEFQ10587 303 aa16.25■□□□□ 0.19
TCF3-202ENST00000344749 TSPYL4Q9UJ04 414 aa16.25■□□□□ 0.19
TCF3-202ENST00000344749 L1TD1Q5T7N2 865 aaKnown RBP16.25■□□□□ 0.19
TCF3-202ENST00000344749 TESK2Q96S53 571 aa16.25■□□□□ 0.19
TCF3-202ENST00000344749 SYCP2Q9BX26 1530 aa16.24■□□□□ 0.19
TCF3-202ENST00000344749 FOXD4L6Q3SYB3 417 aaPredicted RBP16.24■□□□□ 0.19
TCF3-202ENST00000344749 SULT6B1Q6IMI4 303 aa16.24■□□□□ 0.19
TCF3-202ENST00000344749 FOXD4L3Q6VB84 417 aaPredicted RBP16.24■□□□□ 0.19
TCF3-202ENST00000344749 FBLN1P23142 703 aa16.24■□□□□ 0.19
TCF3-202ENST00000344749 FANCAO15360 1455 aa16.24■□□□□ 0.19
TCF3-202ENST00000344749 DNTTIP2Q5QJE6 756 aaKnown RBP16.23■□□□□ 0.19
TCF3-202ENST00000344749 DUSP27Q5VZP5 1158 aa16.23■□□□□ 0.19
TCF3-202ENST00000344749 USP35Q9P2H5 1018 aa16.23■□□□□ 0.19
TCF3-202ENST00000344749 CCDC9Q9Y3X0 531 aaKnown RBP16.23■□□□□ 0.19
TCF3-202ENST00000344749 PSME1Q06323 249 aa16.23■□□□□ 0.19
TCF3-202ENST00000344749 NFKBIBQ15653 356 aa16.23■□□□□ 0.19
TCF3-202ENST00000344749 CFAP44Q96MT7 982 aa16.23■□□□□ 0.19
TCF3-202ENST00000344749 TRAPPC8Q9Y2L5 1435 aa16.23■□□□□ 0.19
TCF3-202ENST00000344749 NOS1P29475 1434 aa16.22■□□□□ 0.19
TCF3-202ENST00000344749 GSE1Q14687 1217 aa16.22■□□□□ 0.19
TCF3-202ENST00000344749 PZPP20742 1482 aa16.22■□□□□ 0.19
TCF3-202ENST00000344749 C22orf23Q9BZE7 217 aa16.22■□□□□ 0.19
TCF3-202ENST00000344749 RPGRIP1LQ68CZ1 1315 aa16.22■□□□□ 0.19
TCF3-202ENST00000344749 TWISTNBQ3B726 338 aaPredicted RBP16.21■□□□□ 0.19
TCF3-202ENST00000344749 TMPOP42166 694 aaKnown RBP16.21■□□□□ 0.19
TCF3-202ENST00000344749 AMER1Q5JTC6 1135 aaPredicted RBP16.21■□□□□ 0.18
TCF3-202ENST00000344749 WDR63Q8IWG1 891 aa16.2■□□□□ 0.18
TCF3-202ENST00000344749 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
TCF3-202ENST00000344749 GOLGA6L4A6NEF3 574 aa16.19■□□□□ 0.18
TCF3-202ENST00000344749 GOLGA6L3A6NEY3 463 aa16.19■□□□□ 0.18
TCF3-202ENST00000344749 RALGAPBQ86X10 1494 aa16.19■□□□□ 0.18
TCF3-202ENST00000344749 PLCH2O75038 1416 aa16.19■□□□□ 0.18
TCF3-202ENST00000344749 ATF7IPQ6VMQ6 1270 aa16.19■□□□□ 0.18
TCF3-202ENST00000344749 DHX29Q7Z478 1369 aaKnown RBP16.18■□□□□ 0.18
TCF3-202ENST00000344749 RTEL1-TNFRSF6BF6WH68 1400 aa16.18■□□□□ 0.18
TCF3-202ENST00000344749 SCAF11Q99590 1463 aaKnown RBP16.18■□□□□ 0.18
TCF3-202ENST00000344749 DCTN1Q14203 1278 aa16.18■□□□□ 0.18
TCF3-202ENST00000344749 C1orf141Q5JVX7 400 aa16.18■□□□□ 0.18
TCF3-202ENST00000344749 ZNF428Q96B54 188 aa16.18■□□□□ 0.18
TCF3-202ENST00000344749 ABCA5Q8WWZ7 1642 aa16.18■□□□□ 0.18
TCF3-202ENST00000344749 ABTB2Q8N961 1025 aa16.18■□□□□ 0.18
TCF3-202ENST00000344749 FAM135AQ9P2D6 1515 aa16.17■□□□□ 0.18
TCF3-202ENST00000344749 ZRSR1Q15695 479 aaKnown RBP16.17■□□□□ 0.18
TCF3-202ENST00000344749 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
TCF3-202ENST00000344749 ST18O60284 1047 aa16.16■□□□□ 0.18
TCF3-202ENST00000344749 FRAT2O75474 233 aaPredicted RBP16.16■□□□□ 0.18
TCF3-202ENST00000344749 RARSP54136 660 aaKnown RBP16.16■□□□□ 0.18
TCF3-202ENST00000344749 MVPQ14764 893 aaKnown RBP16.16■□□□□ 0.18
TCF3-202ENST00000344749 PER1O15534 1290 aaPredicted RBP16.16■□□□□ 0.18
TCF3-202ENST00000344749 NME9Q86XW9 330 aa16.16■□□□□ 0.18
TCF3-202ENST00000344749 C14orf93Q9H972 538 aaKnown RBP16.16■□□□□ 0.18
TCF3-202ENST00000344749 NPHP1O15259 732 aa16.16■□□□□ 0.18
TCF3-202ENST00000344749 NUDT16Q96DE0 195 aaKnown RBP16.16■□□□□ 0.18
TCF3-202ENST00000344749 EMILIN1Q9Y6C2 1016 aa16.16■□□□□ 0.18
TCF3-202ENST00000344749 SSH1Q8WYL5 1049 aa16.15■□□□□ 0.18
TCF3-202ENST00000344749 CCDC61Q9Y6R9 512 aa16.15■□□□□ 0.18
TCF3-202ENST00000344749 C9orf78Q9NZ63 289 aaPredicted RBP16.15■□□□□ 0.18
TCF3-202ENST00000344749 ATAD2Q6PL18 1390 aa16.15■□□□□ 0.18
TCF3-202ENST00000344749 TMEM57Q8N5G2 664 aa16.14■□□□□ 0.17
TCF3-202ENST00000344749 SAMD9Q5K651 1589 aa16.14■□□□□ 0.17
TCF3-202ENST00000344749 CHMP4AQ9BY43 222 aa16.14■□□□□ 0.17
TCF3-202ENST00000344749 MIS18AQ9NYP9 233 aa16.14■□□□□ 0.17
TCF3-202ENST00000344749 ANO2Q9NQ90 1003 aa16.13■□□□□ 0.17
TCF3-202ENST00000344749 CEBPAP49715 358 aaPredicted RBP16.13■□□□□ 0.17
TCF3-202ENST00000344749 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
TCF3-202ENST00000344749 KDM5BQ9UGL1 1544 aa16.13■□□□□ 0.17
TCF3-202ENST00000344749 TEX14Q8IWB6 1497 aa16.12■□□□□ 0.17
TCF3-202ENST00000344749 RBM33Q96EV2 1170 aaKnown RBP16.12■□□□□ 0.17
TCF3-202ENST00000344749 DDX49Q9Y6V7 483 aaKnown RBP16.12■□□□□ 0.17
TCF3-202ENST00000344749 PARD3Q8TEW0 1356 aa16.12■□□□□ 0.17
TCF3-202ENST00000344749 AIMP1Q12904 312 aaKnown RBP16.12■□□□□ 0.17
TCF3-202ENST00000344749 ESCO1Q5FWF5 840 aa16.11■□□□□ 0.17
TCF3-202ENST00000344749 GORABQ5T7V8 394 aa16.11■□□□□ 0.17
TCF3-202ENST00000344749 CARD14Q9BXL6 1004 aa16.11■□□□□ 0.17
TCF3-202ENST00000344749 ITSN2Q9NZM3 1697 aa16.11■□□□□ 0.17
TCF3-202ENST00000344749 FCHSD2O94868 740 aa16.11■□□□□ 0.17
TCF3-202ENST00000344749 AAMPQ13685 434 aa16.11■□□□□ 0.17
TCF3-202ENST00000344749 NUP160Q12769 1436 aa16.11■□□□□ 0.17
TCF3-202ENST00000344749 CHMP5Q9NZZ3 219 aa16.11■□□□□ 0.17
TCF3-202ENST00000344749 GPATCH3Q96I76 525 aa16.11■□□□□ 0.17
TCF3-202ENST00000344749 DNMT1P26358 1616 aaKnown RBP16.1■□□□□ 0.17
TCF3-202ENST00000344749 MSNP26038 577 aaKnown RBP16.09■□□□□ 0.17
TCF3-202ENST00000344749 MCM10Q7L590 875 aa16.09■□□□□ 0.17
TCF3-202ENST00000344749 ASXL2Q76L83 1435 aa16.09■□□□□ 0.17
TCF3-202ENST00000344749 ZNF692Q9BU19 519 aaPredicted RBP16.09■□□□□ 0.17
TCF3-202ENST00000344749 NLRP2Q9NX02 1062 aa16.09■□□□□ 0.17
TCF3-202ENST00000344749 KDM6BO15054 1643 aa16.09■□□□□ 0.17
TCF3-202ENST00000344749 REC8O95072 547 aa16.08■□□□□ 0.17
TCF3-202ENST00000344749 XPCQ01831 940 aaPredicted RBP16.08■□□□□ 0.17
TCF3-202ENST00000344749 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.17
TCF3-202ENST00000344749 NFE2L2Q16236 605 aa16.08■□□□□ 0.16
TCF3-202ENST00000344749 IGHDP01880 384 aa16.08■□□□□ 0.16
TCF3-202ENST00000344749 NKTRP30414 1462 aaKnown RBP16.08■□□□□ 0.16
TCF3-202ENST00000344749 HDAC5Q9UQL6 1122 aa16.08■□□□□ 0.16
TCF3-202ENST00000344749 DDX11L8A8MPP1 907 aa16.07■□□□□ 0.16
TCF3-202ENST00000344749 SPINK5Q9NQ38 1064 aaPredicted RBP16.07■□□□□ 0.16
TCF3-202ENST00000344749 TNNQ9UQP3 1299 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms