RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 PDE3BQ13370 1112 aa14.86□□□□□ -0.03
TRIOBP-202ENST00000344404 TXNDC2Q86VQ3 553 aa14.85□□□□□ -0.03
TRIOBP-202ENST00000344404 COG6Q9Y2V7 657 aa14.85□□□□□ -0.03
TRIOBP-202ENST00000344404 DDX58O95786 925 aaKnown RBP14.85□□□□□ -0.03
TRIOBP-202ENST00000344404 MAP7D2Q96T17 732 aa14.85□□□□□ -0.03
TRIOBP-202ENST00000344404 ANKRD62A6NC57 917 aa14.84□□□□□ -0.03
TRIOBP-202ENST00000344404 TTLL12Q14166 644 aaPredicted RBP14.84□□□□□ -0.03
TRIOBP-202ENST00000344404 FAM161AQ3B820 660 aa14.84□□□□□ -0.03
TRIOBP-202ENST00000344404 PDILTQ8N807 584 aa14.84□□□□□ -0.03
TRIOBP-202ENST00000344404 OFD1O75665 1012 aa14.84□□□□□ -0.03
TRIOBP-202ENST00000344404 TNIKQ9UKE5 1360 aa14.83□□□□□ -0.03
TRIOBP-202ENST00000344404 MYL6BP14649 208 aa14.83□□□□□ -0.04
TRIOBP-202ENST00000344404 ZSCAN29Q8IWY8 852 aaPredicted RBP14.83□□□□□ -0.04
TRIOBP-202ENST00000344404 PTPRGP23470 1445 aa14.83□□□□□ -0.04
TRIOBP-202ENST00000344404 RIPK4P57078 832 aa14.82□□□□□ -0.04
TRIOBP-202ENST00000344404 ST20-MTHFSA0A0A6YYL1 179 aa14.82□□□□□ -0.04
TRIOBP-202ENST00000344404 ZKSCAN1P17029 563 aaPredicted RBP14.82□□□□□ -0.04
TRIOBP-202ENST00000344404 L3MBTL2Q969R5 705 aa14.82□□□□□ -0.04
TRIOBP-202ENST00000344404 CGNL1Q0VF96 1302 aa14.82□□□□□ -0.04
TRIOBP-202ENST00000344404 HOOK1Q9UJC3 728 aaKnown RBP14.82□□□□□ -0.04
TRIOBP-202ENST00000344404 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
TRIOBP-202ENST00000344404 SPDYE4A6NLX3 237 aa14.81□□□□□ -0.04
TRIOBP-202ENST00000344404 NEFHP12036 1026 aa14.81□□□□□ -0.04
TRIOBP-202ENST00000344404 DNAJC2Q99543 621 aaKnown RBP14.81□□□□□ -0.04
TRIOBP-202ENST00000344404 PLCD3Q8N3E9 789 aa14.81□□□□□ -0.04
TRIOBP-202ENST00000344404 RUFY2Q8WXA3 655 aa14.81□□□□□ -0.04
TRIOBP-202ENST00000344404 CAGE1Q8TC20 777 aa14.81□□□□□ -0.04
TRIOBP-202ENST00000344404 BRPF1P55201 1214 aaPredicted RBP14.8□□□□□ -0.04
TRIOBP-202ENST00000344404 CCDC144AA2RUR9 1427 aa14.8□□□□□ -0.04
TRIOBP-202ENST00000344404 GGNBP2Q9H3C7 697 aa14.8□□□□□ -0.04
TRIOBP-202ENST00000344404 ZHX3Q9H4I2 956 aa14.8□□□□□ -0.04
TRIOBP-202ENST00000344404 RALYLQ86SE5 291 aaKnown RBP14.8□□□□□ -0.04
TRIOBP-202ENST00000344404 CCDC85AQ96PX6 553 aaPredicted RBP14.8□□□□□ -0.04
TRIOBP-202ENST00000344404 CNNM1Q9NRU3 951 aa14.79□□□□□ -0.04
TRIOBP-202ENST00000344404 CRBNQ96SW2 442 aa14.79□□□□□ -0.04
TRIOBP-202ENST00000344404 RAB3GAP2Q9H2M9 1393 aa14.79□□□□□ -0.04
TRIOBP-202ENST00000344404 CCDC18Q5T9S5 1454 aa14.79□□□□□ -0.04
TRIOBP-202ENST00000344404 SAFBQ15424 915 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRIOBP-202ENST00000344404 DIAPH1O60610 1272 aaKnown RBP14.78□□□□□ -0.04
TRIOBP-202ENST00000344404 MATR3P43243 847 aaKnown RBP eCLIP14.78□□□□□ -0.04
TRIOBP-202ENST00000344404 PIBF1Q8WXW3 757 aa14.77□□□□□ -0.04
TRIOBP-202ENST00000344404 CABP4P57796 275 aa14.77□□□□□ -0.04
TRIOBP-202ENST00000344404 KRT18P05783 430 aaKnown RBP14.76□□□□□ -0.05
TRIOBP-202ENST00000344404 ZKSCAN2Q63HK3 967 aa14.76□□□□□ -0.05
TRIOBP-202ENST00000344404 CDK5RAP3Q96JB5 506 aa14.76□□□□□ -0.05
TRIOBP-202ENST00000344404 SLC26A8Q96RN1 970 aa14.76□□□□□ -0.05
TRIOBP-202ENST00000344404 CEBPZQ03701 1054 aaKnown RBP14.76□□□□□ -0.05
TRIOBP-202ENST00000344404 HSP90AA2PQ14568 343 aaPredicted RBP14.76□□□□□ -0.05
TRIOBP-202ENST00000344404 WDR78Q5VTH9 848 aa14.76□□□□□ -0.05
TRIOBP-202ENST00000344404 ATP6V1DQ9Y5K8 247 aa14.75□□□□□ -0.05
TRIOBP-202ENST00000344404 SYCP1Q15431 976 aa14.75□□□□□ -0.05
TRIOBP-202ENST00000344404 SASS6Q6UVJ0 657 aa14.75□□□□□ -0.05
TRIOBP-202ENST00000344404 GPRASP1Q5JY77 1395 aa14.75□□□□□ -0.05
TRIOBP-202ENST00000344404 BRMS1Q9HCU9 246 aa14.75□□□□□ -0.05
TRIOBP-202ENST00000344404 APAF1O14727 1248 aa14.75□□□□□ -0.05
TRIOBP-202ENST00000344404 MPHOSPH10O00566 681 aaKnown RBP14.74□□□□□ -0.05
TRIOBP-202ENST00000344404 ZC3H6P61129 1189 aaKnown RBP14.74□□□□□ -0.05
TRIOBP-202ENST00000344404 SIL1Q9H173 461 aa14.74□□□□□ -0.05
TRIOBP-202ENST00000344404 SMC3Q9UQE7 1217 aa14.74□□□□□ -0.05
TRIOBP-202ENST00000344404 CCDC173Q0VFZ6 552 aa14.74□□□□□ -0.05
TRIOBP-202ENST00000344404 TEX35Q5T0J7 233 aa14.74□□□□□ -0.05
TRIOBP-202ENST00000344404 FMN1Q68DA7 1419 aa14.74□□□□□ -0.05
TRIOBP-202ENST00000344404 RNF20Q5VTR2 975 aa14.74□□□□□ -0.05
TRIOBP-202ENST00000344404 CDR1P51861 262 aa14.74□□□□□ -0.05
TRIOBP-202ENST00000344404 DDX11L8A8MPP1 907 aa14.73□□□□□ -0.05
TRIOBP-202ENST00000344404 CA8P35219 290 aa14.73□□□□□ -0.05
TRIOBP-202ENST00000344404 CCER2I3L3R5 266 aa14.73□□□□□ -0.05
TRIOBP-202ENST00000344404 EXOC6Q8TAG9 804 aa14.72□□□□□ -0.05
TRIOBP-202ENST00000344404 MAP4K4O95819 1239 aaPredicted RBP14.72□□□□□ -0.05
TRIOBP-202ENST00000344404 IPO9Q96P70 1041 aaKnown RBP14.72□□□□□ -0.05
TRIOBP-202ENST00000344404 NEBLO76041 1014 aa14.72□□□□□ -0.05
TRIOBP-202ENST00000344404 PDCL3Q9H2J4 239 aa14.72□□□□□ -0.05
TRIOBP-202ENST00000344404 LNPKQ9C0E8 428 aa14.72□□□□□ -0.05
TRIOBP-202ENST00000344404 RDXP35241 583 aaKnown RBP14.71□□□□□ -0.05
TRIOBP-202ENST00000344404 IFT57Q9NWB7 429 aa14.71□□□□□ -0.05
TRIOBP-202ENST00000344404 TTC39AQ5SRH9 613 aa14.71□□□□□ -0.05
TRIOBP-202ENST00000344404 FMNL2Q96PY5 1086 aa14.71□□□□□ -0.05
TRIOBP-202ENST00000344404 NLRP13Q86W25 1043 aa14.71□□□□□ -0.06
TRIOBP-202ENST00000344404 OLFM4Q6UX06 510 aa14.7□□□□□ -0.06
TRIOBP-202ENST00000344404 MNS1Q8NEH6 495 aa14.7□□□□□ -0.06
TRIOBP-202ENST00000344404 ARHGAP5Q13017 1502 aa14.7□□□□□ -0.06
TRIOBP-202ENST00000344404 WASHC2AQ641Q2 1341 aa14.7□□□□□ -0.06
TRIOBP-202ENST00000344404 SEPT7Q16181 437 aaKnown RBP14.7□□□□□ -0.06
TRIOBP-202ENST00000344404 NGLY1Q96IV0 654 aa14.7□□□□□ -0.06
TRIOBP-202ENST00000344404 FSD1Q9BTV5 496 aa14.69□□□□□ -0.06
TRIOBP-202ENST00000344404 FAM13BQ9NYF5 915 aa14.69□□□□□ -0.06
TRIOBP-202ENST00000344404 UACAQ9BZF9 1416 aa14.69□□□□□ -0.06
TRIOBP-202ENST00000344404 TATP17735 454 aaPredicted RBP14.69□□□□□ -0.06
TRIOBP-202ENST00000344404 MROH2BQ7Z745 1585 aa14.69□□□□□ -0.06
TRIOBP-202ENST00000344404 PRDM11Q9NQV5 511 aa14.68□□□□□ -0.06
TRIOBP-202ENST00000344404 TBC1D2BQ9UPU7 963 aa14.68□□□□□ -0.06
TRIOBP-202ENST00000344404 XBP1P17861 261 aa14.68□□□□□ -0.06
TRIOBP-202ENST00000344404 ENOX2Q16206 610 aaKnown RBP14.68□□□□□ -0.06
TRIOBP-202ENST00000344404 TMEM87AQ8NBN3 555 aa14.68□□□□□ -0.06
TRIOBP-202ENST00000344404 CCDC191Q8NCU4 936 aa14.68□□□□□ -0.06
TRIOBP-202ENST00000344404 SEPT11Q9NVA2 429 aaKnown RBP14.68□□□□□ -0.06
TRIOBP-202ENST00000344404 STK3Q13188 491 aa14.68□□□□□ -0.06
TRIOBP-202ENST00000344404 ZNF644Q9H582 1327 aaPredicted RBP14.67□□□□□ -0.06
TRIOBP-202ENST00000344404 UBTFL1P0CB47 393 aaPredicted RBP14.67□□□□□ -0.06
TRIOBP-202ENST00000344404 H0YHG0 523 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms